RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 ONECUT3O60422 494 aaPredicted RBP16.87■□□□□ 0.29
RANBP3-229ENST00000592771 PDCP20941 246 aa16.87■□□□□ 0.29
RANBP3-229ENST00000592771 RBM6P78332 1123 aaKnown RBP16.87■□□□□ 0.29
RANBP3-229ENST00000592771 NEK1Q96PY6 1258 aa16.87■□□□□ 0.29
RANBP3-229ENST00000592771 MAP7D2Q96T17 732 aa16.87■□□□□ 0.29
RANBP3-229ENST00000592771 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
RANBP3-229ENST00000592771 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 PTMAP06454 111 aaKnown RBP16.86■□□□□ 0.29
RANBP3-229ENST00000592771 UQCRFS1P1P0C7P4 283 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 GJB2P29033 226 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 APPBP2Q92624 585 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 SEC31BQ9NQW1 1179 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 RGS17Q9UGC6 210 aaPredicted RBP16.86■□□□□ 0.29
RANBP3-229ENST00000592771 MTMR6Q9Y217 621 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 KIAA2012Q0VF49 1180 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 CCDC102BQ68D86 513 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 PI16Q6UXB8 463 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 CCDC83Q8IWF9 413 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 BCL2L12Q9HB09 334 aa16.86■□□□□ 0.29
RANBP3-229ENST00000592771 A0A1B0GUL6 1792 aa16.85■□□□□ 0.29
RANBP3-229ENST00000592771 RXRBP28702 533 aa16.85■□□□□ 0.29
RANBP3-229ENST00000592771 PHKA1P46020 1223 aa16.85■□□□□ 0.29
RANBP3-229ENST00000592771 KCNQ4P56696 695 aa16.85■□□□□ 0.29
RANBP3-229ENST00000592771 TTF1Q15361 905 aaPredicted RBP16.85■□□□□ 0.29
RANBP3-229ENST00000592771 STOX1Q6ZVD7 989 aa16.85■□□□□ 0.29
RANBP3-229ENST00000592771 MYO5AQ9Y4I1 1855 aaKnown RBP16.85■□□□□ 0.29
RANBP3-229ENST00000592771 DOCK2Q92608 1830 aa16.85■□□□□ 0.29
RANBP3-229ENST00000592771 COL4A1P02462 1669 aa16.84■□□□□ 0.29
RANBP3-229ENST00000592771 FOXP2O15409 715 aa16.84■□□□□ 0.29
RANBP3-229ENST00000592771 SLC5A1P13866 664 aa16.84■□□□□ 0.29
RANBP3-229ENST00000592771 SF3B3Q15393 1217 aaKnown RBP16.84■□□□□ 0.29
RANBP3-229ENST00000592771 MPHOSPH8Q99549 860 aa16.84■□□□□ 0.29
RANBP3-229ENST00000592771 NARFQ9UHQ1 456 aa16.84■□□□□ 0.29
RANBP3-229ENST00000592771 ELP1O95163 1332 aa16.84■□□□□ 0.29
RANBP3-229ENST00000592771 HMGB1P09429 215 aaKnown RBP16.84■□□□□ 0.29
RANBP3-229ENST00000592771 IGHMBP2P38935 993 aaKnown RBP16.84■□□□□ 0.29
RANBP3-229ENST00000592771 SLC10A5Q5PT55 438 aa16.84■□□□□ 0.29
RANBP3-229ENST00000592771 FAM182BQ5T319 152 aa16.84■□□□□ 0.29
RANBP3-229ENST00000592771 HELBQ8NG08 1087 aaPredicted RBP16.84■□□□□ 0.29
RANBP3-229ENST00000592771 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.84■□□□□ 0.291e-6■■■□□ 15.4
RANBP3-229ENST00000592771 R3HCC1Q9Y3T6 440 aaKnown RBP16.84■□□□□ 0.29
RANBP3-229ENST00000592771 TPM3P06753 285 aa16.83■□□□□ 0.28
RANBP3-229ENST00000592771 ADD2P35612 726 aa16.83■□□□□ 0.28
RANBP3-229ENST00000592771 ZSCAN25Q6NSZ9 544 aa16.83■□□□□ 0.28
RANBP3-229ENST00000592771 POTEAQ6S8J7 498 aa16.83■□□□□ 0.28
RANBP3-229ENST00000592771 SASS6Q6UVJ0 657 aa16.83■□□□□ 0.28
RANBP3-229ENST00000592771 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
RANBP3-229ENST00000592771 TCEANC2Q96MN5 208 aa16.83■□□□□ 0.28
RANBP3-229ENST00000592771 FUCA2Q9BTY2 467 aa16.83■□□□□ 0.28
RANBP3-229ENST00000592771 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
RANBP3-229ENST00000592771 ERFEQ4G0M1 354 aa16.82■□□□□ 0.28
RANBP3-229ENST00000592771 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
RANBP3-229ENST00000592771 PIH1D3Q9NQM4 214 aaKnown RBP16.82■□□□□ 0.28
RANBP3-229ENST00000592771 CCNL1Q9UK58 526 aaPredicted RBP16.82■□□□□ 0.28
RANBP3-229ENST00000592771 DYNC1I1O14576 645 aa16.82■□□□□ 0.28
RANBP3-229ENST00000592771 UBE3CQ15386 1083 aa16.82■□□□□ 0.28
RANBP3-229ENST00000592771 WASHC4Q2M389 1173 aa16.82■□□□□ 0.28
RANBP3-229ENST00000592771 TBC1D9BQ66K14 1250 aa16.82■□□□□ 0.28
RANBP3-229ENST00000592771 NECAB1Q8N987 351 aa16.82■□□□□ 0.28
RANBP3-229ENST00000592771 CDC5LQ99459 802 aaKnown RBP16.82■□□□□ 0.28
RANBP3-229ENST00000592771 AGXT2Q9BYV1 514 aa16.82■□□□□ 0.28
RANBP3-229ENST00000592771 PUS7LQ9H0K6 701 aaKnown RBP16.82■□□□□ 0.28
RANBP3-229ENST00000592771 FIBPO43427 364 aa16.81■□□□□ 0.28
RANBP3-229ENST00000592771 KDM4AO75164 1064 aa16.81■□□□□ 0.28
RANBP3-229ENST00000592771 KRT85P78386 507 aa16.81■□□□□ 0.28
RANBP3-229ENST00000592771 DHX32Q7L7V1 743 aaKnown RBP16.81■□□□□ 0.28
RANBP3-229ENST00000592771 CTNNA3Q9UI47 895 aa16.81■□□□□ 0.28
RANBP3-229ENST00000592771 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.81■□□□□ 0.284e-6■□□□□ 8.6
RANBP3-229ENST00000592771 C4BP0C0L5 1744 aa16.81■□□□□ 0.28
RANBP3-229ENST00000592771 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
RANBP3-229ENST00000592771 C3orf67Q6ZVT6 689 aa16.8■□□□□ 0.28
RANBP3-229ENST00000592771 C4AP0C0L4 1744 aa16.8■□□□□ 0.28
RANBP3-229ENST00000592771 A0A0G2JLW4 131 aa16.8■□□□□ 0.28
RANBP3-229ENST00000592771 E7EWF7 191 aa16.8■□□□□ 0.28
RANBP3-229ENST00000592771 GNPATO15228 680 aa16.8■□□□□ 0.28
RANBP3-229ENST00000592771 GPAA1O43292 621 aa16.8■□□□□ 0.28
RANBP3-229ENST00000592771 DNM1Q05193 864 aaKnown RBP16.8■□□□□ 0.28
RANBP3-229ENST00000592771 LARP1BQ659C4 914 aaKnown RBP16.8■□□□□ 0.28
RANBP3-229ENST00000592771 PIBF1Q8WXW3 757 aa16.8■□□□□ 0.28
RANBP3-229ENST00000592771 NYXQ9GZU5 481 aa16.8■□□□□ 0.28
RANBP3-229ENST00000592771 TCRBV5S4A2TA0A5A2 114 aa16.79■□□□□ 0.28
RANBP3-229ENST00000592771 ADCY5O95622 1261 aa16.79■□□□□ 0.28
RANBP3-229ENST00000592771 CHRNDQ07001 517 aa16.79■□□□□ 0.28
RANBP3-229ENST00000592771 RASGRF1Q13972 1273 aa16.79■□□□□ 0.28
RANBP3-229ENST00000592771 Q6ZUG5 572 aa16.79■□□□□ 0.28
RANBP3-229ENST00000592771 FBXL16Q8N461 479 aa16.79■□□□□ 0.28
RANBP3-229ENST00000592771 SPATA5Q8NB90 893 aa16.79■□□□□ 0.28
RANBP3-229ENST00000592771 GTF3C6Q969F1 213 aa16.79■□□□□ 0.28
RANBP3-229ENST00000592771 SRP68Q9UHB9 627 aaKnown RBP16.79■□□□□ 0.28
RANBP3-229ENST00000592771 RTCBQ9Y3I0 505 aaKnown RBP16.79■□□□□ 0.28
RANBP3-229ENST00000592771 TAF1P21675 1872 aa16.79■□□□□ 0.28
RANBP3-229ENST00000592771 SNAP23O00161 211 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 CCDC192P0DO97 292 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 PDE6AP16499 860 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 SLC9C2Q5TAH2 1124 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 TTLL5Q6EMB2 1281 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 SMIM5Q71RC9 77 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 KRT27Q7Z3Y8 459 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 SCAND2PQ9GZW5 306 aaPredicted RBP16.78■□□□□ 0.28
RANBP3-229ENST00000592771 USP25Q9UHP3 1055 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms