RNA–Protein interactions for RNA: ENST00000591994.1

RPRD1A-210, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2

Gene RPRD1A, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-210ENST00000591994 CYP4F12Q9HCS2 524 aa4.51□□□□□ -1.69
RPRD1A-210ENST00000591994 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 SSFA2P28290 1259 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 TXNDC11Q6PKC3 985 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 BEND4Q6ZU67 534 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 DTX1Q86Y01 620 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 TRIM42Q8IWZ5 723 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 UBASH3BQ8TF42 649 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 GTF3C2Q8WUA4 911 aaPredicted RBP4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 BHLHE41Q9C0J9 482 aaPredicted RBP4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 GGNBP2Q9H3C7 697 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 ATG3Q9NT62 314 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 SLAIN2Q9P270 581 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 BMP3P12645 472 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 SPINK2P20155 84 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 IKBKEQ14164 716 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 DDX54Q8TDD1 881 aaKnown RBP4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 OSMRQ99650 979 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 KCNF1Q9H3M0 494 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 KANSL3Q9P2N6 904 aa4.5□□□□□ -1.69
RPRD1A-210ENST00000591994 CARNS1A5YM72 827 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 ADAM11O75078 769 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 CDC25BP30305 580 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 NUTM2GQ5VZR2 741 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 ATCAYQ86WG3 371 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 CHRDQ9H2X0 955 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 GOLGA2P5Q9HBQ8 144 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 AMOTL2Q9Y2J4 779 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 PRR19A6NJB7 356 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 DDX3YO15523 660 aaKnown RBP4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 MPSTP25325 297 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 GP2P55259 537 aaKnown RBP4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 FKBP4Q02790 459 aaKnown RBP eCLIP4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 AAMPQ13685 434 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 FMNL2Q96PY5 1086 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 POLIQ9UNA4 740 aa4.49□□□□□ -1.69
RPRD1A-210ENST00000591994 TNFRSF21O75509 655 aa4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 WNT11O96014 354 aa4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 TGFB1P01137 390 aa4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 EXOSC6Q5RKV6 272 aaKnown RBP4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 PAOXQ6QHF9 649 aa4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 METTL22Q9BUU2 404 aaPredicted RBP4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 TMPRSS13Q9BYE2 586 aa4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 EGFL7Q9UHF1 273 aa4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 HMX2A2RU54 273 aa4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 SOX1O00570 391 aaPredicted RBP4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 MAP4P27816 1152 aaKnown RBP4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 PREPP48147 710 aa4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 SHKBP1Q8TBC3 707 aa4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 ZFYVE28Q9HCC9 887 aa4.48□□□□□ -1.69
RPRD1A-210ENST00000591994 NLRP12P59046 1061 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 SLC7A3Q8WY07 619 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 KRTAP4-12Q9BQ66 201 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 ZKSCAN3Q9BRR0 538 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 PIM2Q9P1W9 311 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 TMEM88BA6NKF7 163 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 TIAF1O95411 115 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 ADAMTSL4Q6UY14 1074 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 VN1R5Q7Z5H4 357 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 GJD3Q8N144 294 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 LEMD3Q9Y2U8 911 aa4.47□□□□□ -1.69
RPRD1A-210ENST00000591994 USP11P51784 963 aa4.46□□□□□ -1.7
RPRD1A-210ENST00000591994 HNRNPUQ00839 825 aaKnown RBP eCLIP4.46□□□□□ -1.7
RPRD1A-210ENST00000591994 C12orf50Q8NA57 414 aaPredicted RBP4.46□□□□□ -1.7
RPRD1A-210ENST00000591994 WDR64B1ANS9 1081 aa4.46□□□□□ -1.7
RPRD1A-210ENST00000591994 EREGO14944 169 aa4.46□□□□□ -1.7
RPRD1A-210ENST00000591994 MED26O95402 600 aa4.46□□□□□ -1.7
RPRD1A-210ENST00000591994 ESRRAP11474 423 aaPredicted RBP4.46□□□□□ -1.7
RPRD1A-210ENST00000591994 OSBPL1AQ9BXW6 950 aa4.46□□□□□ -1.7
RPRD1A-210ENST00000591994 OAS3Q9Y6K5 1087 aaKnown RBP4.46□□□□□ -1.7
RPRD1A-210ENST00000591994 LOC100289279A0A1B0GTE1 492 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 CYP11A1P05108 521 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 PDIA4P13667 645 aaKnown RBP4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 RXRBP28702 533 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 PDE4CQ08493 712 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 KRTAP1-3Q8IUG1 177 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 GALNT12Q8IXK2 581 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 USP26Q9BXU7 913 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 USTQ9Y2C2 406 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 SYNGAP1Q96PV0 1343 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 FAM95CA0A1B0GW59 222 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 BTBD11A6QL63 1104 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 FZD6O60353 706 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 ACPPP15309 386 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 YBX3P16989 372 aaKnown RBP eCLIP4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 CYP27A1Q02318 531 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 FBXL18Q96ME1 805 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 CITED4Q96RK1 184 aa4.45□□□□□ -1.7
RPRD1A-210ENST00000591994 PRNPP04156 253 aa4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 TAL1P17542 331 aaPredicted RBP4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 GSTM4Q03013 218 aa4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 SOX4Q06945 474 aaPredicted RBP4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 MAP7Q14244 749 aa4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 EZH1Q92800 747 aaPredicted RBP4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 FOSL1P15407 271 aa4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 PCDH1Q08174 1060 aa4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 PDE3BQ13370 1112 aa4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 ASAP3Q8TDY4 903 aa4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 CLEC4MQ9H2X3 399 aaPredicted RBP4.44□□□□□ -1.7
RPRD1A-210ENST00000591994 A0A096LPE4 126 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms