RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 IDH1O75874 414 aaKnown RBP12.29□□□□□ -0.44
VPS25-206ENST00000591584 FGAP02671 866 aa12.29□□□□□ -0.44
VPS25-206ENST00000591584 PDE6AP16499 860 aa12.29□□□□□ -0.44
VPS25-206ENST00000591584 EVCP57679 992 aa12.29□□□□□ -0.44
VPS25-206ENST00000591584 HMGN5P82970 282 aaKnown RBP12.29□□□□□ -0.44
VPS25-206ENST00000591584 TRDNQ13061 729 aa12.29□□□□□ -0.44
VPS25-206ENST00000591584 LARP1BQ659C4 914 aaKnown RBP12.29□□□□□ -0.44
VPS25-206ENST00000591584 HELBQ8NG08 1087 aaPredicted RBP12.29□□□□□ -0.44
VPS25-206ENST00000591584 GTF3C6Q969F1 213 aa12.29□□□□□ -0.44
VPS25-206ENST00000591584 AIDAQ96BJ3 306 aa12.29□□□□□ -0.44
VPS25-206ENST00000591584 PUS7LQ9H0K6 701 aaKnown RBP12.29□□□□□ -0.44
VPS25-206ENST00000591584 MINPP1Q9UNW1 487 aa12.29□□□□□ -0.44
VPS25-206ENST00000591584 ZNF804BA4D1E1 1349 aa12.29□□□□□ -0.44
VPS25-206ENST00000591584 CARMIL3Q8ND23 1372 aa12.29□□□□□ -0.44
VPS25-206ENST00000591584 FSD2A1L4K1 749 aa12.28□□□□□ -0.44
VPS25-206ENST00000591584 DHX16O60231 1041 aaKnown RBP12.28□□□□□ -0.44
VPS25-206ENST00000591584 PRPF40AO75400 957 aaKnown RBP12.28□□□□□ -0.44
VPS25-206ENST00000591584 F13A1P00488 732 aa12.28□□□□□ -0.44
VPS25-206ENST00000591584 MCM5P33992 734 aa12.28□□□□□ -0.44
VPS25-206ENST00000591584 MRE11P49959 708 aa12.28□□□□□ -0.44
VPS25-206ENST00000591584 BICDL1Q6ZP65 573 aa12.28□□□□□ -0.44
VPS25-206ENST00000591584 KRT27Q7Z3Y8 459 aa12.28□□□□□ -0.44
VPS25-206ENST00000591584 SYAP1Q96A49 352 aaPredicted RBP12.28□□□□□ -0.44
VPS25-206ENST00000591584 NACAP1Q9BZK3 213 aa12.28□□□□□ -0.44
VPS25-206ENST00000591584 PIH1D3Q9NQM4 214 aaKnown RBP12.28□□□□□ -0.44
VPS25-206ENST00000591584 ZNF532Q9HCE3 1301 aa12.28□□□□□ -0.44
VPS25-206ENST00000591584 BTAF1O14981 1849 aa12.27□□□□□ -0.44
VPS25-206ENST00000591584 SCN7AQ01118 1682 aa12.27□□□□□ -0.45
VPS25-206ENST00000591584 TCRBV5S4A2TA0A5A2 114 aa12.27□□□□□ -0.45
VPS25-206ENST00000591584 LARGE1O95461 756 aa12.27□□□□□ -0.45
VPS25-206ENST00000591584 RASGRF1Q13972 1273 aa12.27□□□□□ -0.45
VPS25-206ENST00000591584 ZNF772Q68DY9 489 aaPredicted RBP12.27□□□□□ -0.45
VPS25-206ENST00000591584 RALYLQ86SE5 291 aaKnown RBP12.27□□□□□ -0.45
VPS25-206ENST00000591584 VPS37DQ86XT2 251 aa12.27□□□□□ -0.45
VPS25-206ENST00000591584 STRBPQ96SI9 672 aaKnown RBP12.27□□□□□ -0.45
VPS25-206ENST00000591584 MTA3Q9BTC8 594 aa12.27□□□□□ -0.45
VPS25-206ENST00000591584 DDX60Q8IY21 1712 aaKnown RBP12.27□□□□□ -0.45
VPS25-206ENST00000591584 PNPLA7Q6ZV29 1317 aa12.27□□□□□ -0.45
VPS25-206ENST00000591584 LY75O60449 1722 aa12.26□□□□□ -0.45
VPS25-206ENST00000591584 ARAP2Q8WZ64 1704 aa12.26□□□□□ -0.45
VPS25-206ENST00000591584 NPHP1O15259 732 aa12.26□□□□□ -0.45
VPS25-206ENST00000591584 CHGBP05060 677 aa12.26□□□□□ -0.45
VPS25-206ENST00000591584 BCAMP50895 628 aa12.26□□□□□ -0.45
VPS25-206ENST00000591584 STOX1Q6ZVD7 989 aa12.26□□□□□ -0.45
VPS25-206ENST00000591584 PTF1AQ7RTS3 328 aa12.26□□□□□ -0.45
VPS25-206ENST00000591584 FBXO33Q7Z6M2 555 aa12.26□□□□□ -0.45
VPS25-206ENST00000591584 LRP2BPQ9P2M1 347 aa12.26□□□□□ -0.45
VPS25-206ENST00000591584 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
VPS25-206ENST00000591584 MTMR6Q9Y217 621 aa12.26□□□□□ -0.45
VPS25-206ENST00000591584 LETM1O95202 739 aaPredicted RBP12.25□□□□□ -0.45
VPS25-206ENST00000591584 APPP05067 770 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 NT5C2P49902 561 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 ZNF445P59923 1031 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 PI16Q6UXB8 463 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 MAGEB6Q8N7X4 407 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 NECAB1Q8N987 351 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 SMARCC2Q8TAQ2 1214 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 BRF1Q92994 677 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 LARP6Q9BRS8 491 aaKnown RBP12.25□□□□□ -0.45
VPS25-206ENST00000591584 GZF1Q9H116 711 aaPredicted RBP12.25□□□□□ -0.45
VPS25-206ENST00000591584 ZSCAN16Q9H4T2 348 aaPredicted RBP12.25□□□□□ -0.45
VPS25-206ENST00000591584 CNNM2Q9H8M5 875 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 LEMD3Q9Y2U8 911 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 TAF6LQ9Y6J9 622 aa12.25□□□□□ -0.45
VPS25-206ENST00000591584 PHF14O94880 888 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 TM4SF1P30408 202 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 KCNQ4P56696 695 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 RBM6P78332 1123 aaKnown RBP12.24□□□□□ -0.45
VPS25-206ENST00000591584 ST5P78524 1137 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 ST3GAL1Q11201 340 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 SLFNL1Q499Z3 407 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 ATL3Q6DD88 541 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 TMC4Q7Z404 712 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 MB21D2Q8IYB1 491 aaPredicted RBP12.24□□□□□ -0.45
VPS25-206ENST00000591584 CNBD1Q8NA66 436 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 FAM184AQ8NB25 1140 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 CELF1Q92879 486 aaKnown RBP12.24□□□□□ -0.45
VPS25-206ENST00000591584 TMEM87BQ96K49 555 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
VPS25-206ENST00000591584 KRT23Q9C075 422 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 RNF41Q9H4P4 317 aaPredicted RBP12.24□□□□□ -0.45
VPS25-206ENST00000591584 WWC3Q9ULE0 1092 aa12.24□□□□□ -0.45
VPS25-206ENST00000591584 AKAP11Q9UKA4 1901 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 FOXP2O15409 715 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 PCP11498 1178 aaKnown RBP12.23□□□□□ -0.45
VPS25-206ENST00000591584 HIBADHP31937 336 aaKnown RBP12.23□□□□□ -0.45
VPS25-206ENST00000591584 UBE2HP62256 183 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 KRT85P78386 507 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 GRAPQ13588 217 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 NFIXQ14938 502 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
VPS25-206ENST00000591584 TTLL5Q6EMB2 1281 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 NAA16Q6N069 864 aaPredicted RBP12.23□□□□□ -0.45
VPS25-206ENST00000591584 GIMAP6Q6P9H5 292 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 C15orf52Q6ZUT6 534 aaKnown RBP12.23□□□□□ -0.45
VPS25-206ENST00000591584 IFNL3Q8IZI9 196 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 FLAD1Q8NFF5 587 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 GRAPLQ8TC17 118 aaPredicted RBP12.23□□□□□ -0.45
VPS25-206ENST00000591584 TCEANC2Q96MN5 208 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 SCAND2PQ9GZW5 306 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms