RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 AGBL3Q8NEM8 1001 aa14.32□□□□□ -0.12
VMP1-211ENST00000591315 SSH3Q8TE77 659 aa14.32□□□□□ -0.12
VMP1-211ENST00000591315 ZBTB40Q9NUA8 1239 aa14.32□□□□□ -0.12
VMP1-211ENST00000591315 PCDHAC2Q9Y5I4 1007 aa14.32□□□□□ -0.12
VMP1-211ENST00000591315 F8W031 263 aaPredicted RBP14.31□□□□□ -0.12
VMP1-211ENST00000591315 SASH1O94885 1247 aa14.31□□□□□ -0.12
VMP1-211ENST00000591315 USP17L8P0C7I0 530 aa14.31□□□□□ -0.12
VMP1-211ENST00000591315 CHAF1AQ13111 956 aaPredicted RBP14.31□□□□□ -0.12
VMP1-211ENST00000591315 PDE3AQ14432 1141 aa14.31□□□□□ -0.12
VMP1-211ENST00000591315 KIAA0825Q8IV33 1275 aa14.31□□□□□ -0.12
VMP1-211ENST00000591315 SIRT2Q8IXJ6 389 aa14.31□□□□□ -0.12
VMP1-211ENST00000591315 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
VMP1-211ENST00000591315 SCAF8Q9UPN6 1271 aaKnown RBP14.31□□□□□ -0.12
VMP1-211ENST00000591315 IFIT1P09914 478 aaKnown RBP14.3□□□□□ -0.12
VMP1-211ENST00000591315 SLC5A1P13866 664 aa14.3□□□□□ -0.12
VMP1-211ENST00000591315 RRP1P56182 461 aaKnown RBP14.3□□□□□ -0.12
VMP1-211ENST00000591315 KIF4BQ2VIQ3 1234 aa14.3□□□□□ -0.12
VMP1-211ENST00000591315 LPIN2Q92539 896 aa14.3□□□□□ -0.12
VMP1-211ENST00000591315 GLIS2Q9BZE0 524 aaPredicted RBP14.3□□□□□ -0.12
VMP1-211ENST00000591315 DDX19BQ9UMR2 479 aa14.3□□□□□ -0.12
VMP1-211ENST00000591315 AOX1Q06278 1338 aa14.3□□□□□ -0.12
VMP1-211ENST00000591315 PASKQ96RG2 1323 aa14.3□□□□□ -0.12
VMP1-211ENST00000591315 ZNF609O15014 1411 aa14.3□□□□□ -0.12
VMP1-211ENST00000591315 SURF6O75683 361 aaKnown RBP14.29□□□□□ -0.12
VMP1-211ENST00000591315 PHKA1P46020 1223 aa14.29□□□□□ -0.12
VMP1-211ENST00000591315 G3BP1Q13283 466 aaKnown RBP eCLIP14.29□□□□□ -0.12
VMP1-211ENST00000591315 VPS37DQ86XT2 251 aa14.29□□□□□ -0.12
VMP1-211ENST00000591315 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.29□□□□□ -0.12
VMP1-211ENST00000591315 MYOZ2Q9NPC6 264 aa14.29□□□□□ -0.12
VMP1-211ENST00000591315 PGAP2Q9UHJ9 254 aa14.29□□□□□ -0.12
VMP1-211ENST00000591315 FAM205AQ6ZU69 1335 aa14.29□□□□□ -0.12
VMP1-211ENST00000591315 COL1A1P02452 1464 aaPredicted RBP14.29□□□□□ -0.12
VMP1-211ENST00000591315 A0A1B0GUL7 405 aa14.28□□□□□ -0.12
VMP1-211ENST00000591315 APLP1P51693 650 aa14.28□□□□□ -0.12
VMP1-211ENST00000591315 SCARF1Q14162 830 aa14.28□□□□□ -0.12
VMP1-211ENST00000591315 NBPF9Q3BBW0 867 aa14.28□□□□□ -0.12
VMP1-211ENST00000591315 CAVIN4Q5BKX8 364 aa14.28□□□□□ -0.12
VMP1-211ENST00000591315 USP48Q86UV5 1035 aa14.28□□□□□ -0.12
VMP1-211ENST00000591315 ADM5C9JUS6 153 aa14.27□□□□□ -0.13
VMP1-211ENST00000591315 MFSD14BQ5SR56 506 aa14.27□□□□□ -0.13
VMP1-211ENST00000591315 XAGE2Q96GT9 111 aa14.27□□□□□ -0.13
VMP1-211ENST00000591315 EXOC6BQ9Y2D4 811 aa14.27□□□□□ -0.13
VMP1-211ENST00000591315 NOP58Q9Y2X3 529 aaKnown RBP14.27□□□□□ -0.13
VMP1-211ENST00000591315 MYO3BQ8WXR4 1341 aa14.26□□□□□ -0.13
VMP1-211ENST00000591315 FRAT2O75474 233 aaPredicted RBP14.26□□□□□ -0.13
VMP1-211ENST00000591315 OS9Q13438 667 aaPredicted RBP14.26□□□□□ -0.13
VMP1-211ENST00000591315 NEUROD6Q96NK8 337 aa14.26□□□□□ -0.13
VMP1-211ENST00000591315 GGA3Q9NZ52 723 aa14.26□□□□□ -0.13
VMP1-211ENST00000591315 ARAP2Q8WZ64 1704 aa14.26□□□□□ -0.13
VMP1-211ENST00000591315 MYH13Q9UKX3 1938 aa14.25□□□□□ -0.13
VMP1-211ENST00000591315 PCNTO95613 3336 aa14.25□□□□□ -0.13
VMP1-211ENST00000591315 APBB1O00213 710 aa14.25□□□□□ -0.13
VMP1-211ENST00000591315 WNT10BO00744 389 aa14.25□□□□□ -0.13
VMP1-211ENST00000591315 ANGEL2Q5VTE6 544 aaKnown RBP14.25□□□□□ -0.13
VMP1-211ENST00000591315 CST9Q5W186 159 aa14.25□□□□□ -0.13
VMP1-211ENST00000591315 CCDC102BQ68D86 513 aa14.25□□□□□ -0.13
VMP1-211ENST00000591315 DNAJC5GQ8N7S2 189 aa14.25□□□□□ -0.13
VMP1-211ENST00000591315 ZC3H15Q8WU90 426 aaKnown RBP14.25□□□□□ -0.13
VMP1-211ENST00000591315 ZBED3Q96IU2 234 aaPredicted RBP14.25□□□□□ -0.13
VMP1-211ENST00000591315 CRBNQ96SW2 442 aa14.25□□□□□ -0.13
VMP1-211ENST00000591315 FKBP1AP62942 108 aaKnown RBP14.24□□□□□ -0.13
VMP1-211ENST00000591315 CFAP100Q494V2 611 aa14.24□□□□□ -0.13
VMP1-211ENST00000591315 PRAMEF18Q5VWM3 479 aa14.24□□□□□ -0.13
VMP1-211ENST00000591315 PI16Q6UXB8 463 aa14.24□□□□□ -0.13
VMP1-211ENST00000591315 KRT26Q7Z3Y9 468 aa14.24□□□□□ -0.13
VMP1-211ENST00000591315 OGFOD1Q8N543 542 aa14.24□□□□□ -0.13
VMP1-211ENST00000591315 DBNDD2Q9BQY9 259 aa14.24□□□□□ -0.13
VMP1-211ENST00000591315 TLR7Q9NYK1 1049 aaKnown RBP14.24□□□□□ -0.13
VMP1-211ENST00000591315 TTF2Q9UNY4 1162 aaKnown RBP14.24□□□□□ -0.13
VMP1-211ENST00000591315 TRPM7Q96QT4 1865 aa14.23□□□□□ -0.13
VMP1-211ENST00000591315 RASGRF1Q13972 1273 aa14.23□□□□□ -0.13
VMP1-211ENST00000591315 TNNI3KQ59H18 835 aa14.23□□□□□ -0.13
VMP1-211ENST00000591315 CDC37L1Q7L3B6 337 aa14.23□□□□□ -0.13
VMP1-211ENST00000591315 RPAP2Q8IXW5 612 aaPredicted RBP14.23□□□□□ -0.13
VMP1-211ENST00000591315 EAF2Q96CJ1 260 aaPredicted RBP14.23□□□□□ -0.13
VMP1-211ENST00000591315 PRMT6Q96LA8 375 aaPredicted RBP14.23□□□□□ -0.13
VMP1-211ENST00000591315 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
VMP1-211ENST00000591315 ZNF408Q9H9D4 720 aa14.23□□□□□ -0.13
VMP1-211ENST00000591315 HDAC9Q9UKV0 1011 aa14.23□□□□□ -0.13
VMP1-211ENST00000591315 AKAP2Q9Y2D5 859 aa14.23□□□□□ -0.13
VMP1-211ENST00000591315 PCDHB15Q9Y5E8 787 aa14.23□□□□□ -0.13
VMP1-211ENST00000591315 FPGT-TNNI3KV9GXZ4 949 aa14.23□□□□□ -0.13
VMP1-211ENST00000591315 CLRN2A0PK11 232 aa14.22□□□□□ -0.13
VMP1-211ENST00000591315 DLGAP5Q15398 846 aa14.22□□□□□ -0.13
VMP1-211ENST00000591315 DCPSQ96C86 337 aaKnown RBP14.22□□□□□ -0.13
VMP1-211ENST00000591315 CCDC8Q9H0W5 538 aaPredicted RBP14.22□□□□□ -0.13
VMP1-211ENST00000591315 IL1RAPL2Q9NP60 686 aa14.22□□□□□ -0.13
VMP1-211ENST00000591315 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.13
VMP1-211ENST00000591315 TMEM88BA6NKF7 163 aa14.21□□□□□ -0.13
VMP1-211ENST00000591315 CELF2O95319 508 aaKnown RBP14.21□□□□□ -0.13
VMP1-211ENST00000591315 SPDYE6P0CI01 402 aa14.21□□□□□ -0.13
VMP1-211ENST00000591315 RBM5P52756 815 aaKnown RBP eCLIP14.21□□□□□ -0.13
VMP1-211ENST00000591315 GNL3LQ9NVN8 582 aaKnown RBP14.21□□□□□ -0.13
VMP1-211ENST00000591315 MKRN1Q9UHC7 482 aaKnown RBP14.21□□□□□ -0.13
VMP1-211ENST00000591315 DBNLQ9UJU6 430 aaKnown RBP14.21□□□□□ -0.13
VMP1-211ENST00000591315 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.13
VMP1-211ENST00000591315 PRDX5P30044 214 aa14.2□□□□□ -0.14
VMP1-211ENST00000591315 CRKP46108 304 aa14.2□□□□□ -0.14
VMP1-211ENST00000591315 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
VMP1-211ENST00000591315 TBC1D9Q6ZT07 1266 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms