RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 GJB4Q9NTQ9 266 aa22.42■■□□□ 1.18
MBD3-207ENST00000590550 CCDC191Q8NCU4 936 aa22.41■■□□□ 1.18
MBD3-207ENST00000590550 CEP126Q9P2H0 1117 aa22.41■■□□□ 1.18
MBD3-207ENST00000590550 ILDR1Q86SU0 546 aaPredicted RBP22.41■■□□□ 1.18
MBD3-207ENST00000590550 ZNF75DP51815 510 aa22.4■■□□□ 1.18
MBD3-207ENST00000590550 KMT5BQ4FZB7 885 aa22.4■■□□□ 1.18
MBD3-207ENST00000590550 CALCOCO1Q9P1Z2 691 aa22.4■■□□□ 1.18
MBD3-207ENST00000590550 PCDH11XQ9BZA7 1347 aa22.4■■□□□ 1.18
MBD3-207ENST00000590550 PCDH11YQ9BZA8 1340 aa22.4■■□□□ 1.18
MBD3-207ENST00000590550 FOXP2O15409 715 aa22.4■■□□□ 1.18
MBD3-207ENST00000590550 LLPHQ9BRT6 129 aaKnown RBP22.4■■□□□ 1.18
MBD3-207ENST00000590550 ME1P48163 572 aa22.39■■□□□ 1.18
MBD3-207ENST00000590550 CCDC57Q2TAC2 916 aa22.39■■□□□ 1.18
MBD3-207ENST00000590550 FDPSP14324 419 aaKnown RBP22.39■■□□□ 1.17
MBD3-207ENST00000590550 SYCP1Q15431 976 aa22.39■■□□□ 1.17
MBD3-207ENST00000590550 TTC39AQ5SRH9 613 aa22.39■■□□□ 1.17
MBD3-207ENST00000590550 CADPS2Q86UW7 1296 aa22.39■■□□□ 1.17
MBD3-207ENST00000590550 ZBTB9Q96C00 473 aa22.39■■□□□ 1.17
MBD3-207ENST00000590550 XAGE2Q96GT9 111 aa22.39■■□□□ 1.17
MBD3-207ENST00000590550 PKD1L3Q7Z443 1732 aa22.39■■□□□ 1.17
MBD3-207ENST00000590550 TPD52L1Q16890 204 aaPredicted RBP22.38■■□□□ 1.17
MBD3-207ENST00000590550 NAA16Q6N069 864 aaPredicted RBP22.38■■□□□ 1.17
MBD3-207ENST00000590550 GPR108Q9NPR9 543 aa22.38■■□□□ 1.17
MBD3-207ENST00000590550 NPHP1O15259 732 aa22.38■■□□□ 1.17
MBD3-207ENST00000590550 TDRD7Q8NHU6 1098 aaKnown RBP22.38■■□□□ 1.17
MBD3-207ENST00000590550 ZAP70P43403 619 aa22.38■■□□□ 1.17
MBD3-207ENST00000590550 CCDC144BQ3MJ40 725 aa22.38■■□□□ 1.17
MBD3-207ENST00000590550 PLA2G4DQ86XP0 818 aa22.38■■□□□ 1.17
MBD3-207ENST00000590550 CCDC144CPQ8IYA2 1237 aa22.38■■□□□ 1.17
MBD3-207ENST00000590550 AGXT2Q9BYV1 514 aa22.38■■□□□ 1.17
MBD3-207ENST00000590550 PUS7LQ9H0K6 701 aaKnown RBP22.38■■□□□ 1.17
MBD3-207ENST00000590550 RCOR1Q9UKL0 485 aa22.38■■□□□ 1.17
MBD3-207ENST00000590550 WDR17Q8IZU2 1322 aa22.37■■□□□ 1.17
MBD3-207ENST00000590550 POLR3DP05423 398 aaPredicted RBP22.37■■□□□ 1.17
MBD3-207ENST00000590550 HSPA2P54652 639 aa22.37■■□□□ 1.17
MBD3-207ENST00000590550 SNW1Q13573 536 aaKnown RBP22.37■■□□□ 1.17
MBD3-207ENST00000590550 DENND2AQ9ULE3 1009 aa22.37■■□□□ 1.17
MBD3-207ENST00000590550 SALL1Q9NSC2 1324 aa22.37■■□□□ 1.17
MBD3-207ENST00000590550 ARID5BQ14865 1188 aa22.37■■□□□ 1.17
MBD3-207ENST00000590550 TJP1Q07157 1748 aa22.37■■□□□ 1.17
MBD3-207ENST00000590550 CARMIL3Q8ND23 1372 aa22.36■■□□□ 1.17
MBD3-207ENST00000590550 CLIP2Q9UDT6 1046 aa22.36■■□□□ 1.17
MBD3-207ENST00000590550 STRCP1A6NGW2 1772 aa22.36■■□□□ 1.17
MBD3-207ENST00000590550 FGAP02671 866 aa22.36■■□□□ 1.17
MBD3-207ENST00000590550 GPTP24298 496 aa22.36■■□□□ 1.17
MBD3-207ENST00000590550 CCDC158Q5M9N0 1113 aa22.36■■□□□ 1.17
MBD3-207ENST00000590550 FSIP1Q8NA03 581 aa22.36■■□□□ 1.17
MBD3-207ENST00000590550 ZNF397Q8NF99 534 aaPredicted RBP22.35■■□□□ 1.17
MBD3-207ENST00000590550 LAMB4A4D0S4 1761 aa22.35■■□□□ 1.17
MBD3-207ENST00000590550 ERVV-2B6SEH9 535 aa22.35■■□□□ 1.17
MBD3-207ENST00000590550 ZSCAN25Q6NSZ9 544 aa22.35■■□□□ 1.17
MBD3-207ENST00000590550 CCDC73Q6ZRK6 1079 aa22.35■■□□□ 1.17
MBD3-207ENST00000590550 KLHL34Q8N239 644 aa22.35■■□□□ 1.17
MBD3-207ENST00000590550 ZNF215Q9UL58 517 aaPredicted RBP22.35■■□□□ 1.17
MBD3-207ENST00000590550 TULP2O00295 520 aa22.34■■□□□ 1.17
MBD3-207ENST00000590550 SLC20A2Q08357 652 aa22.34■■□□□ 1.17
MBD3-207ENST00000590550 IQCB1Q15051 598 aa22.34■■□□□ 1.17
MBD3-207ENST00000590550 BRINP3Q76B58 766 aa22.34■■□□□ 1.17
MBD3-207ENST00000590550 NKX2-3Q8TAU0 364 aa22.34■■□□□ 1.17
MBD3-207ENST00000590550 CACTINQ8WUQ7 758 aaKnown RBP22.34■■□□□ 1.17
MBD3-207ENST00000590550 ZFP91Q96JP5 570 aaPredicted RBP22.34■■□□□ 1.17
MBD3-207ENST00000590550 A0A1B0GVL5 298 aa22.34■■□□□ 1.17
MBD3-207ENST00000590550 ASAP1Q9ULH1 1129 aa22.34■■□□□ 1.17
MBD3-207ENST00000590550 KCPQ6ZWJ8 1503 aa22.34■■□□□ 1.17
MBD3-207ENST00000590550 CPDO75976 1380 aa22.34■■□□□ 1.17
MBD3-207ENST00000590550 GOLGA6L19H0YKK7 550 aa22.33■■□□□ 1.17
MBD3-207ENST00000590550 KINO60870 393 aaKnown RBP22.33■■□□□ 1.17
MBD3-207ENST00000590550 CIAO1O76071 339 aa22.33■■□□□ 1.17
MBD3-207ENST00000590550 FBXO38Q6PIJ6 1188 aa22.33■■□□□ 1.17
MBD3-207ENST00000590550 DNAJC10Q8IXB1 793 aa22.33■■□□□ 1.17
MBD3-207ENST00000590550 PAXBP1Q9Y5B6 917 aa22.33■■□□□ 1.17
MBD3-207ENST00000590550 KLF18A0A0U1RQI7 1052 aa22.33■■□□□ 1.17
MBD3-207ENST00000590550 PRC1O43663 620 aa22.33■■□□□ 1.17
MBD3-207ENST00000590550 IL2RBP14784 551 aa22.33■■□□□ 1.17
MBD3-207ENST00000590550 TCIRG1Q13488 830 aa22.33■■□□□ 1.17
MBD3-207ENST00000590550 ZNF274Q96GC6 653 aaPredicted RBP22.33■■□□□ 1.17
MBD3-207ENST00000590550 ISCA1Q9BUE6 129 aa22.33■■□□□ 1.17
MBD3-207ENST00000590550 NUP188Q5SRE5 1749 aa22.33■■□□□ 1.16
MBD3-207ENST00000590550 GOLGA8BA8MQT2 603 aa22.33■■□□□ 1.16
MBD3-207ENST00000590550 IRX3P78415 501 aaPredicted RBP22.33■■□□□ 1.16
MBD3-207ENST00000590550 ELF2Q15723 593 aa22.33■■□□□ 1.16
MBD3-207ENST00000590550 CEP135Q66GS9 1140 aa22.33■■□□□ 1.16
MBD3-207ENST00000590550 PCDHA7Q9UN72 937 aa22.33■■□□□ 1.16
MBD3-207ENST00000590550 CLIC4Q9Y696 253 aa22.33■■□□□ 1.16
MBD3-207ENST00000590550 HNRNPH2P55795 449 aaKnown RBP22.32■■□□□ 1.16
MBD3-207ENST00000590550 RBM6P78332 1123 aaKnown RBP22.32■■□□□ 1.16
MBD3-207ENST00000590550 IMMTQ16891 758 aaKnown RBP22.32■■□□□ 1.16
MBD3-207ENST00000590550 ENGASEQ8NFI3 743 aa22.32■■□□□ 1.16
MBD3-207ENST00000590550 ZNF396Q96N95 335 aaPredicted RBP22.32■■□□□ 1.16
MBD3-207ENST00000590550 RXRAP19793 462 aa22.31■■□□□ 1.16
MBD3-207ENST00000590550 ANTXR2P58335 489 aa22.31■■□□□ 1.16
MBD3-207ENST00000590550 FAM160A1Q05DH4 1040 aa22.31■■□□□ 1.16
MBD3-207ENST00000590550 KAT6BQ8WYB5 2073 aa22.31■■□□□ 1.16
MBD3-207ENST00000590550 IFIT5Q13325 482 aaKnown RBP22.3■■□□□ 1.16
MBD3-207ENST00000590550 STX1AQ16623 288 aa22.3■■□□□ 1.16
MBD3-207ENST00000590550 HPS5Q9UPZ3 1129 aa22.3■■□□□ 1.16
MBD3-207ENST00000590550 BECN2A8MW95 431 aa22.3■■□□□ 1.16
MBD3-207ENST00000590550 GPAA1O43292 621 aa22.3■■□□□ 1.16
MBD3-207ENST00000590550 HLFQ16534 295 aa22.3■■□□□ 1.16
MBD3-207ENST00000590550 NOL10Q9BSC4 688 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms