RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 NBPF11Q86T75 865 aa16.52■□□□□ 0.24
NEDD4L-227ENST00000590020 CERS5Q8N5B7 392 aa16.52■□□□□ 0.24
NEDD4L-227ENST00000590020 VEZTQ9HBM0 779 aa16.52■□□□□ 0.24
NEDD4L-227ENST00000590020 OTOFQ9HC10 1997 aa16.51■□□□□ 0.23
NEDD4L-227ENST00000590020 CEP290O15078 2479 aa16.51■□□□□ 0.23
NEDD4L-227ENST00000590020 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
NEDD4L-227ENST00000590020 IREB2P48200 963 aaKnown RBP16.51■□□□□ 0.23
NEDD4L-227ENST00000590020 TTLL11Q8NHH1 800 aa16.51■□□□□ 0.23
NEDD4L-227ENST00000590020 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
NEDD4L-227ENST00000590020 OPTNQ96CV9 577 aa16.51■□□□□ 0.23
NEDD4L-227ENST00000590020 ARHGAP39Q9C0H5 1083 aa16.51■□□□□ 0.23
NEDD4L-227ENST00000590020 ZNF804BA4D1E1 1349 aa16.5■□□□□ 0.23
NEDD4L-227ENST00000590020 ECM29Q5VYK3 1845 aa16.5■□□□□ 0.23
NEDD4L-227ENST00000590020 TESPA1A2RU30 521 aaPredicted RBP16.5■□□□□ 0.23
NEDD4L-227ENST00000590020 DPF3Q92784 378 aa16.5■□□□□ 0.23
NEDD4L-227ENST00000590020 RNF39Q9H2S5 420 aa16.5■□□□□ 0.23
NEDD4L-227ENST00000590020 SNAP23O00161 211 aa16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 TAF1CQ15572 869 aaPredicted RBP16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 SUPT20HL1Q3ZLR7 823 aa16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 CFAP100Q494V2 611 aa16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 ANKRD13AQ8IZ07 590 aa16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 BRI3BPQ8WY22 251 aa16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 MS4A4AQ96JQ5 239 aa16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 PRMT6Q96LA8 375 aaPredicted RBP16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 METTL22Q9BUU2 404 aaPredicted RBP16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 MBIPQ9NS73 344 aa16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 JAG2Q9Y219 1238 aa16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
NEDD4L-227ENST00000590020 MMP14P50281 582 aa16.48■□□□□ 0.23
NEDD4L-227ENST00000590020 PPP2R3BQ9Y5P8 575 aa16.48■□□□□ 0.23
NEDD4L-227ENST00000590020 MYH3P11055 1940 aa16.48■□□□□ 0.23
NEDD4L-227ENST00000590020 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
NEDD4L-227ENST00000590020 RASA3Q14644 834 aa16.47■□□□□ 0.23
NEDD4L-227ENST00000590020 MTFR1Q15390 333 aa16.47■□□□□ 0.23
NEDD4L-227ENST00000590020 CCL15Q16663 113 aa16.47■□□□□ 0.23
NEDD4L-227ENST00000590020 CDAN1Q8IWY9 1227 aa16.47■□□□□ 0.23
NEDD4L-227ENST00000590020 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
NEDD4L-227ENST00000590020 SHISA4Q96DD7 197 aa16.47■□□□□ 0.23
NEDD4L-227ENST00000590020 ZFYVE28Q9HCC9 887 aa16.47■□□□□ 0.23
NEDD4L-227ENST00000590020 CD209Q9NNX6 404 aa16.47■□□□□ 0.23
NEDD4L-227ENST00000590020 MAP3K2Q9Y2U5 619 aa16.47■□□□□ 0.23
NEDD4L-227ENST00000590020 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
NEDD4L-227ENST00000590020 MYO1BO43795 1136 aa16.46■□□□□ 0.23
NEDD4L-227ENST00000590020 IGKV5-2P06315 115 aa16.46■□□□□ 0.23
NEDD4L-227ENST00000590020 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
NEDD4L-227ENST00000590020 IGHMBP2P38935 993 aaKnown RBP16.46■□□□□ 0.23
NEDD4L-227ENST00000590020 KCNJ4P48050 445 aa16.46■□□□□ 0.23
NEDD4L-227ENST00000590020 RBM5P52756 815 aaKnown RBP eCLIP16.46■□□□□ 0.23
NEDD4L-227ENST00000590020 MTMR14Q8NCE2 650 aa16.46■□□□□ 0.23
NEDD4L-227ENST00000590020 RANBP2P49792 3224 aaKnown RBP16.45■□□□□ 0.22
NEDD4L-227ENST00000590020 UNCXA6NJT0 531 aa16.45■□□□□ 0.22
NEDD4L-227ENST00000590020 ARHGEF6Q15052 776 aa16.45■□□□□ 0.22
NEDD4L-227ENST00000590020 CWF19L2Q2TBE0 894 aaKnown RBP16.45■□□□□ 0.22
NEDD4L-227ENST00000590020 TAF5LO75529 589 aa16.44■□□□□ 0.22
NEDD4L-227ENST00000590020 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.44■□□□□ 0.22
NEDD4L-227ENST00000590020 SOX1O00570 391 aaPredicted RBP16.43■□□□□ 0.22
NEDD4L-227ENST00000590020 ITGA6P23229 1130 aa16.43■□□□□ 0.22
NEDD4L-227ENST00000590020 CHRNDQ07001 517 aa16.43■□□□□ 0.22
NEDD4L-227ENST00000590020 UBE3BQ7Z3V4 1068 aa16.43■□□□□ 0.22
NEDD4L-227ENST00000590020 HELBQ8NG08 1087 aaPredicted RBP16.43■□□□□ 0.22
NEDD4L-227ENST00000590020 ANKRD2Q9GZV1 360 aa16.43■□□□□ 0.22
NEDD4L-227ENST00000590020 DDX58O95786 925 aaKnown RBP16.42■□□□□ 0.22
NEDD4L-227ENST00000590020 GTF2A2P52657 109 aa16.42■□□□□ 0.22
NEDD4L-227ENST00000590020 LACTBP83111 547 aaPredicted RBP16.42■□□□□ 0.22
NEDD4L-227ENST00000590020 VGLL4Q14135 290 aa16.42■□□□□ 0.22
NEDD4L-227ENST00000590020 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
NEDD4L-227ENST00000590020 MPHOSPH8Q99549 860 aa16.42■□□□□ 0.22
NEDD4L-227ENST00000590020 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
NEDD4L-227ENST00000590020 COL6A3P12111 3177 aa16.41■□□□□ 0.22
NEDD4L-227ENST00000590020 PI4KAP2A4QPH2 592 aa16.41■□□□□ 0.22
NEDD4L-227ENST00000590020 CTGFP29279 349 aa16.41■□□□□ 0.22
NEDD4L-227ENST00000590020 PI4KAP1Q8N8J0 262 aa16.41■□□□□ 0.22
NEDD4L-227ENST00000590020 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
NEDD4L-227ENST00000590020 LRCH3Q96II8 777 aa16.41■□□□□ 0.22
NEDD4L-227ENST00000590020 PRO3102Q9H379 93 aa16.41■□□□□ 0.22
NEDD4L-227ENST00000590020 TDRD3Q9H7E2 651 aaKnown RBP16.41■□□□□ 0.22
NEDD4L-227ENST00000590020 ZNF70Q9UC06 446 aaPredicted RBP16.41■□□□□ 0.22
NEDD4L-227ENST00000590020 TCP10L2B9ZVM9 353 aa16.4■□□□□ 0.22
NEDD4L-227ENST00000590020 TLR2O60603 784 aa16.4■□□□□ 0.22
NEDD4L-227ENST00000590020 KIF22Q14807 665 aa16.4■□□□□ 0.22
NEDD4L-227ENST00000590020 TEPSINQ96N21 525 aa16.4■□□□□ 0.22
NEDD4L-227ENST00000590020 TMEM39BQ9GZU3 492 aa16.4■□□□□ 0.22
NEDD4L-227ENST00000590020 NEURL1BA8MQ27 555 aa16.39■□□□□ 0.21
NEDD4L-227ENST00000590020 ZNF853P0CG23 659 aa16.39■□□□□ 0.21
NEDD4L-227ENST00000590020 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
NEDD4L-227ENST00000590020 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
NEDD4L-227ENST00000590020 BTBD19C9JJ37 291 aa16.38■□□□□ 0.21
NEDD4L-227ENST00000590020 H7C1W4 665 aa16.38■□□□□ 0.21
NEDD4L-227ENST00000590020 SPDYE2Q495Y8 402 aa16.38■□□□□ 0.21
NEDD4L-227ENST00000590020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.38■□□□□ 0.21
NEDD4L-227ENST00000590020 CPA4Q9UI42 421 aa16.38■□□□□ 0.21
NEDD4L-227ENST00000590020 CSADQ9Y600 493 aa16.38■□□□□ 0.21
NEDD4L-227ENST00000590020 A0A1B0GUL6 1792 aa16.38■□□□□ 0.21
NEDD4L-227ENST00000590020 CCL5P13501 91 aa16.37■□□□□ 0.21
NEDD4L-227ENST00000590020 IL1R1P14778 569 aa16.37■□□□□ 0.21
NEDD4L-227ENST00000590020 NEXNQ0ZGT2 675 aa16.37■□□□□ 0.21
NEDD4L-227ENST00000590020 ZNF804AQ7Z570 1209 aa16.37■□□□□ 0.21
NEDD4L-227ENST00000590020 UBE2Q1Q7Z7E8 422 aa16.37■□□□□ 0.21
NEDD4L-227ENST00000590020 ZBTB7BO15156 539 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-227ENST00000590020 PSMC4P43686 418 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms