RNA–Protein interactions for RNA: ENST00000589492.1

BECN1-209, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-209ENST00000589492 CLMNQ96JQ2 1002 aa8.53□□□□□ -1.04
BECN1-209ENST00000589492 MXD3Q9BW11 206 aa8.53□□□□□ -1.04
BECN1-209ENST00000589492 TRIM35Q9UPQ4 493 aa8.53□□□□□ -1.04
BECN1-209ENST00000589492 LAMA3Q16787 3333 aa8.52□□□□□ -1.05
BECN1-209ENST00000589492 SASH1O94885 1247 aa8.52□□□□□ -1.05
BECN1-209ENST00000589492 FXR2P51116 673 aaKnown RBP eCLIP8.52□□□□□ -1.05
BECN1-209ENST00000589492 SLFN5Q08AF3 891 aa8.52□□□□□ -1.05
BECN1-209ENST00000589492 NECTIN2Q92692 538 aa8.52□□□□□ -1.05
BECN1-209ENST00000589492 SLC10A4Q96EP9 437 aa8.52□□□□□ -1.05
BECN1-209ENST00000589492 SSC5DA1L4H1 1573 aa8.52□□□□□ -1.05
BECN1-209ENST00000589492 ERBB4Q15303 1308 aa8.52□□□□□ -1.05
BECN1-209ENST00000589492 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
BECN1-209ENST00000589492 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
BECN1-209ENST00000589492 ZBTB48P10074 688 aaPredicted RBP8.51□□□□□ -1.05
BECN1-209ENST00000589492 EIF2S2P20042 333 aaKnown RBP8.51□□□□□ -1.05
BECN1-209ENST00000589492 GJA5P36382 358 aa8.51□□□□□ -1.05
BECN1-209ENST00000589492 AIMP1Q12904 312 aaKnown RBP8.51□□□□□ -1.05
BECN1-209ENST00000589492 SF3B3Q15393 1217 aaKnown RBP8.51□□□□□ -1.05
BECN1-209ENST00000589492 HSP90AB3PQ58FF7 597 aa8.51□□□□□ -1.05
BECN1-209ENST00000589492 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
BECN1-209ENST00000589492 TRMT2AQ8IZ69 625 aaKnown RBP8.51□□□□□ -1.05
BECN1-209ENST00000589492 PTPN18Q99952 460 aa8.51□□□□□ -1.05
BECN1-209ENST00000589492 PODXL2Q9NZ53 605 aa8.51□□□□□ -1.05
BECN1-209ENST00000589492 GGA1Q9UJY5 639 aa8.51□□□□□ -1.05
BECN1-209ENST00000589492 SALL2Q9Y467 1007 aaPredicted RBP8.51□□□□□ -1.05
BECN1-209ENST00000589492 HOXB7P09629 217 aa8.5□□□□□ -1.05
BECN1-209ENST00000589492 RPS8P62241 208 aaKnown RBP8.5□□□□□ -1.05
BECN1-209ENST00000589492 MTFR1Q15390 333 aa8.5□□□□□ -1.05
BECN1-209ENST00000589492 RTL5Q5HYW3 569 aaPredicted RBP8.5□□□□□ -1.05
BECN1-209ENST00000589492 COPS6Q7L5N1 327 aa8.5□□□□□ -1.05
BECN1-209ENST00000589492 FAM89AQ96GI7 184 aa8.5□□□□□ -1.05
BECN1-209ENST00000589492 ANKIB1Q9P2G1 1089 aa8.5□□□□□ -1.05
BECN1-209ENST00000589492 UNC80Q8N2C7 3258 aa8.5□□□□□ -1.05
BECN1-209ENST00000589492 CHL1O00533 1208 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 ZBTB7BO15156 539 aaPredicted RBP8.49□□□□□ -1.05
BECN1-209ENST00000589492 ZNF853P0CG23 659 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 EVX2Q03828 476 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 MAP3K11Q16584 847 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 DUSP27Q5VZP5 1158 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 OTUD7BQ6GQQ9 843 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 Q7L0L9 218 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 APOBEC3FQ8IUX4 373 aaKnown RBP8.49□□□□□ -1.05
BECN1-209ENST00000589492 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.49□□□□□ -1.05
BECN1-209ENST00000589492 XAGE3Q8WTP9 111 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 FBXW7Q969H0 707 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 ARHGAP39Q9C0H5 1083 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 SEC31BQ9NQW1 1179 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 OTOFQ9HC10 1997 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 FANCIQ9NVI1 1328 aa8.49□□□□□ -1.05
BECN1-209ENST00000589492 A0A1W2PPC1 479 aa8.48□□□□□ -1.05
BECN1-209ENST00000589492 TESPA1A2RU30 521 aaPredicted RBP8.48□□□□□ -1.05
BECN1-209ENST00000589492 GTPBP6O43824 516 aaPredicted RBP8.48□□□□□ -1.05
BECN1-209ENST00000589492 DACT2Q5SW24 774 aa8.48□□□□□ -1.05
BECN1-209ENST00000589492 PODNQ7Z5L7 613 aa8.48□□□□□ -1.05
BECN1-209ENST00000589492 UBE2Q1Q7Z7E8 422 aa8.48□□□□□ -1.05
BECN1-209ENST00000589492 OGFOD1Q8N543 542 aa8.48□□□□□ -1.05
BECN1-209ENST00000589492 DEFB123Q8N688 67 aa8.48□□□□□ -1.05
BECN1-209ENST00000589492 HTATIP2Q9BUP3 242 aa8.48□□□□□ -1.05
BECN1-209ENST00000589492 STAP2Q9UGK3 403 aa8.48□□□□□ -1.05
BECN1-209ENST00000589492 TSPYL4Q9UJ04 414 aa8.48□□□□□ -1.05
BECN1-209ENST00000589492 COL1A1P02452 1464 aaPredicted RBP8.47□□□□□ -1.05
BECN1-209ENST00000589492 ATP5J2-PTCD1G3V325 749 aa8.47□□□□□ -1.05
BECN1-209ENST00000589492 PPP1R12BO60237 982 aaPredicted RBP8.47□□□□□ -1.05
BECN1-209ENST00000589492 ARHGEF6Q15052 776 aa8.47□□□□□ -1.05
BECN1-209ENST00000589492 TAF1CQ15572 869 aaPredicted RBP8.47□□□□□ -1.05
BECN1-209ENST00000589492 ALDH1L2Q3SY69 923 aa8.47□□□□□ -1.05
BECN1-209ENST00000589492 RNF25Q96BH1 459 aaPredicted RBP8.47□□□□□ -1.05
BECN1-209ENST00000589492 DEFB129Q9H1M3 183 aa8.47□□□□□ -1.05
BECN1-209ENST00000589492 STXBP5LQ9Y2K9 1186 aa8.47□□□□□ -1.05
BECN1-209ENST00000589492 NR2E3Q9Y5X4 410 aa8.47□□□□□ -1.05
BECN1-209ENST00000589492 ECM29Q5VYK3 1845 aa8.47□□□□□ -1.05
BECN1-209ENST00000589492 ALPK3Q96L96 1907 aa8.46□□□□□ -1.05
BECN1-209ENST00000589492 SPEF2Q9C093 1822 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 PITPNM1O00562 1244 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 IRS4O14654 1257 aaPredicted RBP8.46□□□□□ -1.06
BECN1-209ENST00000589492 MS4A1P11836 297 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 KIAA0825Q8IV33 1275 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.46□□□□□ -1.06
BECN1-209ENST00000589492 BRI3BPQ8WY22 251 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 OPTNQ96CV9 577 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 ZBED3Q96IU2 234 aaPredicted RBP8.46□□□□□ -1.06
BECN1-209ENST00000589492 MS4A4AQ96JQ5 239 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 ISCA1Q9BUE6 129 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 ZFYVE28Q9HCC9 887 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 MBIPQ9NS73 344 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 ZBTB47Q9UFB7 747 aaPredicted RBP8.46□□□□□ -1.06
BECN1-209ENST00000589492 LAS1LQ9Y4W2 734 aaKnown RBP8.46□□□□□ -1.06
BECN1-209ENST00000589492 XDHP47989 1333 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 KIF16BQ96L93 1317 aa8.46□□□□□ -1.06
BECN1-209ENST00000589492 USP2O75604 605 aaPredicted RBP8.45□□□□□ -1.06
BECN1-209ENST00000589492 NEFLP07196 543 aa8.45□□□□□ -1.06
BECN1-209ENST00000589492 ATP2B4P23634 1241 aa8.45□□□□□ -1.06
BECN1-209ENST00000589492 GJA8P48165 433 aa8.45□□□□□ -1.06
BECN1-209ENST00000589492 LACTBP83111 547 aaPredicted RBP8.45□□□□□ -1.06
BECN1-209ENST00000589492 NBPF12Q5TAG4 269 aaPredicted RBP8.45□□□□□ -1.06
BECN1-209ENST00000589492 FAM43AQ8N2R8 423 aa8.45□□□□□ -1.06
BECN1-209ENST00000589492 CDCA7LQ96GN5 454 aa8.45□□□□□ -1.06
BECN1-209ENST00000589492 CCDC85AQ96PX6 553 aaPredicted RBP8.45□□□□□ -1.06
BECN1-209ENST00000589492 ELP3Q9H9T3 547 aa8.45□□□□□ -1.06
BECN1-209ENST00000589492 MTMR10Q9NXD2 777 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms