RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 TDRD7Q8NHU6 1098 aaKnown RBP17.55■□□□□ 0.4
NPC1-207ENST00000588867 PIH1D3Q9NQM4 214 aaKnown RBP17.55■□□□□ 0.4
NPC1-207ENST00000588867 CWC27Q6UX04 472 aaKnown RBP17.55■□□□□ 0.4
NPC1-207ENST00000588867 SYT17Q9BSW7 474 aa17.55■□□□□ 0.4
NPC1-207ENST00000588867 ABCF2Q9UG63 623 aa17.55■□□□□ 0.4
NPC1-207ENST00000588867 HIP1O00291 1037 aa17.54■□□□□ 0.4
NPC1-207ENST00000588867 IDH1O75874 414 aaKnown RBP17.54■□□□□ 0.4
NPC1-207ENST00000588867 COA1Q9GZY4 146 aa17.54■□□□□ 0.4
NPC1-207ENST00000588867 MYH13Q9UKX3 1938 aa17.54■□□□□ 0.4
NPC1-207ENST00000588867 IL1R1P14778 569 aa17.54■□□□□ 0.4
NPC1-207ENST00000588867 AOC3Q16853 763 aa17.54■□□□□ 0.4
NPC1-207ENST00000588867 LRP2BPQ9P2M1 347 aa17.54■□□□□ 0.4
NPC1-207ENST00000588867 SNED1Q8TER0 1413 aa17.53■□□□□ 0.4
NPC1-207ENST00000588867 COL1A1P02452 1464 aaPredicted RBP17.53■□□□□ 0.4
NPC1-207ENST00000588867 CHGBP05060 677 aa17.53■□□□□ 0.4
NPC1-207ENST00000588867 MFAP1P55081 439 aaKnown RBP17.53■□□□□ 0.4
NPC1-207ENST00000588867 PSMD1Q99460 953 aa17.53■□□□□ 0.4
NPC1-207ENST00000588867 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.53■□□□□ 0.4
NPC1-207ENST00000588867 DBNDD1Q9H9R9 158 aa17.53■□□□□ 0.4
NPC1-207ENST00000588867 PPIP5K2O43314 1243 aa17.52■□□□□ 0.4
NPC1-207ENST00000588867 NMIQ13287 307 aaPredicted RBP17.52■□□□□ 0.4
NPC1-207ENST00000588867 LRRFIP1Q32MZ4 808 aaKnown RBP17.52■□□□□ 0.4
NPC1-207ENST00000588867 RUFY2Q8WXA3 655 aa17.52■□□□□ 0.4
NPC1-207ENST00000588867 FAM227BQ96M60 508 aa17.52■□□□□ 0.4
NPC1-207ENST00000588867 ESYT1Q9BSJ8 1104 aa17.52■□□□□ 0.4
NPC1-207ENST00000588867 MYO5AQ9Y4I1 1855 aaKnown RBP17.52■□□□□ 0.4
NPC1-207ENST00000588867 RNF113AO15541 343 aaKnown RBP17.52■□□□□ 0.39
NPC1-207ENST00000588867 MAP3K12Q12852 859 aa17.52■□□□□ 0.39
NPC1-207ENST00000588867 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.39
NPC1-207ENST00000588867 FBXW7Q969H0 707 aa17.52■□□□□ 0.39
NPC1-207ENST00000588867 ZNF277Q9NRM2 450 aaPredicted RBP17.52■□□□□ 0.39
NPC1-207ENST00000588867 KIAA2012Q0VF49 1180 aa17.51■□□□□ 0.39
NPC1-207ENST00000588867 SLC9C2Q5TAH2 1124 aa17.51■□□□□ 0.39
NPC1-207ENST00000588867 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
NPC1-207ENST00000588867 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
NPC1-207ENST00000588867 GTF2IP78347 998 aa17.5■□□□□ 0.39
NPC1-207ENST00000588867 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
NPC1-207ENST00000588867 PDS5AQ29RF7 1337 aaKnown RBP17.5■□□□□ 0.39
NPC1-207ENST00000588867 A0A0D9SFI3 127 aa17.5■□□□□ 0.39
NPC1-207ENST00000588867 ZFYP08048 801 aaPredicted RBP17.5■□□□□ 0.39
NPC1-207ENST00000588867 PODNQ7Z5L7 613 aa17.5■□□□□ 0.39
NPC1-207ENST00000588867 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
NPC1-207ENST00000588867 TAOK3Q9H2K8 898 aa17.5■□□□□ 0.39
NPC1-207ENST00000588867 RFX7Q2KHR2 1363 aa17.49■□□□□ 0.39
NPC1-207ENST00000588867 ECE2O60344 883 aa17.49■□□□□ 0.39
NPC1-207ENST00000588867 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
NPC1-207ENST00000588867 MAGEB6Q8N7X4 407 aa17.49■□□□□ 0.39
NPC1-207ENST00000588867 SEC62Q99442 399 aaKnown RBP17.49■□□□□ 0.39
NPC1-207ENST00000588867 IL25Q9H293 177 aa17.49■□□□□ 0.39
NPC1-207ENST00000588867 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
NPC1-207ENST00000588867 CHD4Q14839 1912 aa17.49■□□□□ 0.39
NPC1-207ENST00000588867 ZBTB22O15209 634 aa17.48■□□□□ 0.39
NPC1-207ENST00000588867 SGSM2O43147 1006 aa17.48■□□□□ 0.39
NPC1-207ENST00000588867 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
NPC1-207ENST00000588867 TICAM2Q86XR7 235 aa17.48■□□□□ 0.39
NPC1-207ENST00000588867 GOLGB1Q14789 3259 aaKnown RBP17.48■□□□□ 0.39
NPC1-207ENST00000588867 EIF5BO60841 1220 aaKnown RBP17.48■□□□□ 0.39
NPC1-207ENST00000588867 PDE6AP16499 860 aa17.48■□□□□ 0.39
NPC1-207ENST00000588867 ADD2P35612 726 aa17.48■□□□□ 0.39
NPC1-207ENST00000588867 ZGPATQ8N5A5 531 aaKnown RBP17.48■□□□□ 0.39
NPC1-207ENST00000588867 KCNQ5Q9NR82 932 aa17.48■□□□□ 0.39
NPC1-207ENST00000588867 MYH7P12883 1935 aa17.48■□□□□ 0.39
NPC1-207ENST00000588867 ZNF532Q9HCE3 1301 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 FER1L6Q2WGJ9 1857 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 REC8O95072 547 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 PRDX5P30044 214 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 IARSP41252 1262 aaKnown RBP17.47■□□□□ 0.39
NPC1-207ENST00000588867 MCMDC2Q4G0Z9 681 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 ZMYM1Q5SVZ6 1142 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 SPTY2D1Q68D10 685 aaPredicted RBP17.47■□□□□ 0.39
NPC1-207ENST00000588867 VPS33BQ9H267 617 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 ANO2Q9NQ90 1003 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 TSHZ2Q9NRE2 1034 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 NFKBIEO00221 500 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 MFSD14BQ5SR56 506 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 KIAA1211Q6ZU35 1233 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 HELLSQ9NRZ9 838 aa17.47■□□□□ 0.39
NPC1-207ENST00000588867 DOCK2Q92608 1830 aa17.46■□□□□ 0.39
NPC1-207ENST00000588867 ARFGEF1Q9Y6D6 1849 aa17.46■□□□□ 0.39
NPC1-207ENST00000588867 FAM205AQ6ZU69 1335 aa17.46■□□□□ 0.39
NPC1-207ENST00000588867 SALL1Q9NSC2 1324 aa17.46■□□□□ 0.39
NPC1-207ENST00000588867 LDHBP07195 334 aaKnown RBP17.46■□□□□ 0.39
NPC1-207ENST00000588867 UBE3CQ15386 1083 aa17.46■□□□□ 0.39
NPC1-207ENST00000588867 CCDC129Q6ZRS4 1044 aa17.46■□□□□ 0.39
NPC1-207ENST00000588867 ARHGAP27Q6ZUM4 889 aa17.46■□□□□ 0.39
NPC1-207ENST00000588867 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
NPC1-207ENST00000588867 APPBP2Q92624 585 aa17.46■□□□□ 0.39
NPC1-207ENST00000588867 RASSF7Q02833 373 aa17.45■□□□□ 0.38
NPC1-207ENST00000588867 MECOMQ03112 1051 aa17.45■□□□□ 0.38
NPC1-207ENST00000588867 OSBP2Q969R2 916 aa17.45■□□□□ 0.38
NPC1-207ENST00000588867 CYP7A1P22680 504 aa17.45■□□□□ 0.38
NPC1-207ENST00000588867 GRIK5Q16478 980 aa17.45■□□□□ 0.38
NPC1-207ENST00000588867 NAA16Q6N069 864 aaPredicted RBP17.45■□□□□ 0.38
NPC1-207ENST00000588867 ZNF589Q86UQ0 364 aaPredicted RBP17.45■□□□□ 0.38
NPC1-207ENST00000588867 DZIP1Q86YF9 867 aaKnown RBP17.45■□□□□ 0.38
NPC1-207ENST00000588867 NIM1KQ8IY84 436 aa17.45■□□□□ 0.38
NPC1-207ENST00000588867 MXD3Q9BW11 206 aa17.45■□□□□ 0.38
NPC1-207ENST00000588867 PUS7LQ9H0K6 701 aaKnown RBP17.45■□□□□ 0.38
NPC1-207ENST00000588867 RAD50Q92878 1312 aa17.44■□□□□ 0.38
NPC1-207ENST00000588867 TCRBV5S4A2TA0A5A2 114 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms