RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 SBF1O95248 1867 aa17.18■□□□□ 0.34
CCDC130-208ENST00000588071 DCAF8L1A6NGE4 600 aa17.18■□□□□ 0.34
CCDC130-208ENST00000588071 ECE2O60344 883 aa17.18■□□□□ 0.34
CCDC130-208ENST00000588071 CHAF1AQ13111 956 aaPredicted RBP17.18■□□□□ 0.34
CCDC130-208ENST00000588071 SCARF1Q14162 830 aa17.18■□□□□ 0.34
CCDC130-208ENST00000588071 FBXW7Q969H0 707 aa17.18■□□□□ 0.34
CCDC130-208ENST00000588071 HMG20BQ9P0W2 317 aa17.18■□□□□ 0.34
CCDC130-208ENST00000588071 NDUFB9Q9Y6M9 179 aa17.18■□□□□ 0.34
CCDC130-208ENST00000588071 ZAP70P43403 619 aa17.17■□□□□ 0.34
CCDC130-208ENST00000588071 RASGRF1Q13972 1273 aa17.17■□□□□ 0.34
CCDC130-208ENST00000588071 RILPL2Q969X0 211 aa17.17■□□□□ 0.34
CCDC130-208ENST00000588071 DICER1Q9UPY3 1922 aaKnown RBP17.16■□□□□ 0.34
CCDC130-208ENST00000588071 GOLIM4O00461 696 aa17.16■□□□□ 0.34
CCDC130-208ENST00000588071 LMNB1P20700 586 aa17.16■□□□□ 0.34
CCDC130-208ENST00000588071 TTLL5Q6EMB2 1281 aa17.16■□□□□ 0.34
CCDC130-208ENST00000588071 CNTROBQ8N137 903 aa17.16■□□□□ 0.34
CCDC130-208ENST00000588071 PAG1Q9NWQ8 432 aa17.16■□□□□ 0.34
CCDC130-208ENST00000588071 JAG2Q9Y219 1238 aa17.16■□□□□ 0.34
CCDC130-208ENST00000588071 GSPT1P15170 499 aaKnown RBP17.15■□□□□ 0.34
CCDC130-208ENST00000588071 GTF2IP78347 998 aa17.15■□□□□ 0.34
CCDC130-208ENST00000588071 TTF1Q15361 905 aaPredicted RBP17.15■□□□□ 0.34
CCDC130-208ENST00000588071 PI16Q6UXB8 463 aa17.15■□□□□ 0.34
CCDC130-208ENST00000588071 WDR66Q8TBY9 1149 aa17.15■□□□□ 0.34
CCDC130-208ENST00000588071 EVI5LQ96CN4 794 aa17.15■□□□□ 0.34
CCDC130-208ENST00000588071 ZNRF3Q9ULT6 936 aa17.15■□□□□ 0.34
CCDC130-208ENST00000588071 MYO5AQ9Y4I1 1855 aaKnown RBP17.14■□□□□ 0.33
CCDC130-208ENST00000588071 ZBTB22O15209 634 aa17.14■□□□□ 0.33
CCDC130-208ENST00000588071 CYP2E1P05181 493 aaPredicted RBP17.14■□□□□ 0.33
CCDC130-208ENST00000588071 BMP2KLQ5H9B9 411 aa17.14■□□□□ 0.33
CCDC130-208ENST00000588071 ZGPATQ8N5A5 531 aaKnown RBP17.14■□□□□ 0.33
CCDC130-208ENST00000588071 EDC3Q96F86 508 aaKnown RBP17.14■□□□□ 0.33
CCDC130-208ENST00000588071 ANTXR1Q9H6X2 564 aa17.14■□□□□ 0.33
CCDC130-208ENST00000588071 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
CCDC130-208ENST00000588071 PDS5AQ29RF7 1337 aaKnown RBP17.14■□□□□ 0.33
CCDC130-208ENST00000588071 USP17L3A6NCW0 530 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 USP17L4A6NCW7 530 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 SDSP20132 328 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 PRELPP51888 382 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 TBC1D9Q6ZT07 1266 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 USP17L1Q7RTZ2 530 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 TBC1D22AQ8WUA7 517 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 KCNQ5Q9NR82 932 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 LRP2BPQ9P2M1 347 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 FAM205AQ6ZU69 1335 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 SCN9AQ15858 1988 aa17.13■□□□□ 0.33
CCDC130-208ENST00000588071 YDJCA8MPS7 323 aa17.12■□□□□ 0.33
CCDC130-208ENST00000588071 EIF6P56537 245 aaKnown RBP17.12■□□□□ 0.33
CCDC130-208ENST00000588071 MFSD14BQ5SR56 506 aa17.12■□□□□ 0.33
CCDC130-208ENST00000588071 STRIP1Q5VSL9 837 aa17.12■□□□□ 0.33
CCDC130-208ENST00000588071 SPTY2D1Q68D10 685 aaPredicted RBP17.12■□□□□ 0.33
CCDC130-208ENST00000588071 FSD1Q9BTV5 496 aa17.12■□□□□ 0.33
CCDC130-208ENST00000588071 MYH7P12883 1935 aa17.11■□□□□ 0.33
CCDC130-208ENST00000588071 IDH1O75874 414 aaKnown RBP17.11■□□□□ 0.33
CCDC130-208ENST00000588071 RAD17O75943 681 aa17.11■□□□□ 0.33
CCDC130-208ENST00000588071 LRRFIP1Q32MZ4 808 aaKnown RBP17.11■□□□□ 0.33
CCDC130-208ENST00000588071 ERICH6Q7L0X2 663 aa17.11■□□□□ 0.33
CCDC130-208ENST00000588071 KBTBD3Q8NAB2 608 aa17.11■□□□□ 0.33
CCDC130-208ENST00000588071 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■□□□□ 9.6
CCDC130-208ENST00000588071 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
CCDC130-208ENST00000588071 RAI14Q9P0K7 980 aa17.11■□□□□ 0.33
CCDC130-208ENST00000588071 RNF181Q9P0P0 153 aa17.11■□□□□ 0.33
CCDC130-208ENST00000588071 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
CCDC130-208ENST00000588071 PSME4Q14997 1843 aa17.1■□□□□ 0.33
CCDC130-208ENST00000588071 MAP3K12Q12852 859 aa17.1■□□□□ 0.33
CCDC130-208ENST00000588071 C9orf131Q5VYM1 1079 aa17.1■□□□□ 0.33
CCDC130-208ENST00000588071 ZSCAN25Q6NSZ9 544 aa17.1■□□□□ 0.33
CCDC130-208ENST00000588071 COL4A5P29400 1685 aa17.1■□□□□ 0.33
CCDC130-208ENST00000588071 FZD9O00144 591 aa17.09■□□□□ 0.33
CCDC130-208ENST00000588071 LDHBP07195 334 aaKnown RBP17.09■□□□□ 0.33
CCDC130-208ENST00000588071 CXCL9Q07325 125 aa17.09■□□□□ 0.33
CCDC130-208ENST00000588071 TNIP1Q15025 636 aa17.09■□□□□ 0.33
CCDC130-208ENST00000588071 CIAPIN1Q6FI81 312 aa17.09■□□□□ 0.33
CCDC130-208ENST00000588071 MXD3Q9BW11 206 aa17.09■□□□□ 0.33
CCDC130-208ENST00000588071 SALL1Q9NSC2 1324 aa17.09■□□□□ 0.33
CCDC130-208ENST00000588071 PSMD14O00487 310 aa17.08■□□□□ 0.32
CCDC130-208ENST00000588071 FKBP1AP62942 108 aaKnown RBP17.08■□□□□ 0.32
CCDC130-208ENST00000588071 DACT2Q5SW24 774 aa17.08■□□□□ 0.32
CCDC130-208ENST00000588071 DOCK2Q92608 1830 aa17.07■□□□□ 0.32
CCDC130-208ENST00000588071 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
CCDC130-208ENST00000588071 HIP1O00291 1037 aa17.07■□□□□ 0.32
CCDC130-208ENST00000588071 RNF113AO15541 343 aaKnown RBP17.07■□□□□ 0.32
CCDC130-208ENST00000588071 VIL1P09327 827 aaKnown RBP17.07■□□□□ 0.32
CCDC130-208ENST00000588071 SLC9C2Q5TAH2 1124 aa17.07■□□□□ 0.32
CCDC130-208ENST00000588071 CASC1Q6TDU7 716 aa17.07■□□□□ 0.32
CCDC130-208ENST00000588071 DZIP1Q86YF9 867 aaKnown RBP17.07■□□□□ 0.32
CCDC130-208ENST00000588071 SUGT1Q9Y2Z0 365 aa17.07■□□□□ 0.32
CCDC130-208ENST00000588071 MYH2Q9UKX2 1941 aa17.06■□□□□ 0.32
CCDC130-208ENST00000588071 MYO3BQ8WXR4 1341 aa17.06■□□□□ 0.32
CCDC130-208ENST00000588071 PRDX5P30044 214 aa17.06■□□□□ 0.32
CCDC130-208ENST00000588071 RSBN1LQ6PCB5 846 aaPredicted RBP17.06■□□□□ 0.32
CCDC130-208ENST00000588071 TICAM2Q86XR7 235 aa17.06■□□□□ 0.32
CCDC130-208ENST00000588071 CERS5Q8N5B7 392 aa17.06■□□□□ 0.32
CCDC130-208ENST00000588071 MAGEB6Q8N7X4 407 aa17.06■□□□□ 0.32
CCDC130-208ENST00000588071 DIAPH3Q9NSV4 1193 aa17.06■□□□□ 0.32
CCDC130-208ENST00000588071 GJA3Q9Y6H8 435 aa17.06■□□□□ 0.32
CCDC130-208ENST00000588071 IGSF3O75054 1194 aa17.05■□□□□ 0.32
CCDC130-208ENST00000588071 CDC45O75419 566 aa17.05■□□□□ 0.32
CCDC130-208ENST00000588071 ZFYP08048 801 aaPredicted RBP17.05■□□□□ 0.32
CCDC130-208ENST00000588071 GSTO1P78417 241 aa17.05■□□□□ 0.32
CCDC130-208ENST00000588071 MECOMQ03112 1051 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms