RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 BCL11AQ9H165 835 aa12.55□□□□□ -0.4
CLPTM1-207ENST00000587537 BOLA2Q9H3K6 86 aa12.55□□□□□ -0.4
CLPTM1-207ENST00000587537 FAM205AQ6ZU69 1335 aa12.55□□□□□ -0.4
CLPTM1-207ENST00000587537 PSME4Q14997 1843 aa12.54□□□□□ -0.4
CLPTM1-207ENST00000587537 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
CLPTM1-207ENST00000587537 IARSP41252 1262 aaKnown RBP12.54□□□□□ -0.4
CLPTM1-207ENST00000587537 MCAMP43121 646 aa12.54□□□□□ -0.4
CLPTM1-207ENST00000587537 RASGRF1Q13972 1273 aa12.54□□□□□ -0.4
CLPTM1-207ENST00000587537 KBTBD3Q8NAB2 608 aa12.54□□□□□ -0.4
CLPTM1-207ENST00000587537 JDP2Q8WYK2 163 aa12.54□□□□□ -0.4
CLPTM1-207ENST00000587537 HMG20BQ9P0W2 317 aa12.54□□□□□ -0.4
CLPTM1-207ENST00000587537 MYO3BQ8WXR4 1341 aa12.54□□□□□ -0.4
CLPTM1-207ENST00000587537 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 MYH7P12883 1935 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 DICER1Q9UPY3 1922 aaKnown RBP12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 SNAP23O00161 211 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 CDC45O75419 566 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 GSPT1P15170 499 aaKnown RBP12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 SDSP20132 328 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 MAP3K12Q12852 859 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 SLF2Q8IX21 1173 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 NIM1KQ8IY84 436 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 LARGE2Q8N3Y3 721 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 RUFY2Q8WXA3 655 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 ZNF219Q9P2Y4 722 aaPredicted RBP12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 MAST3O60307 1309 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
CLPTM1-207ENST00000587537 MAST2Q6P0Q8 1798 aa12.52□□□□□ -0.41
CLPTM1-207ENST00000587537 LMNB1P20700 586 aa12.52□□□□□ -0.41
CLPTM1-207ENST00000587537 STRIP1Q5VSL9 837 aa12.52□□□□□ -0.41
CLPTM1-207ENST00000587537 OLFM4Q6UX06 510 aa12.52□□□□□ -0.41
CLPTM1-207ENST00000587537 TXNRD3Q86VQ6 643 aa12.52□□□□□ -0.41
CLPTM1-207ENST00000587537 RILPL2Q969X0 211 aa12.52□□□□□ -0.41
CLPTM1-207ENST00000587537 FSD1Q9BTV5 496 aa12.52□□□□□ -0.41
CLPTM1-207ENST00000587537 ZNRF3Q9ULT6 936 aa12.52□□□□□ -0.41
CLPTM1-207ENST00000587537 RAD50Q92878 1312 aa12.52□□□□□ -0.41
CLPTM1-207ENST00000587537 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
CLPTM1-207ENST00000587537 NFKBIEO00221 500 aa12.51□□□□□ -0.41
CLPTM1-207ENST00000587537 GOLIM4O00461 696 aa12.51□□□□□ -0.41
CLPTM1-207ENST00000587537 RIMBP2O15034 1052 aa12.51□□□□□ -0.41
CLPTM1-207ENST00000587537 ECE2O60344 883 aa12.51□□□□□ -0.41
CLPTM1-207ENST00000587537 KLRK1P26718 216 aa12.51□□□□□ -0.41
CLPTM1-207ENST00000587537 ZAP70P43403 619 aa12.51□□□□□ -0.41
CLPTM1-207ENST00000587537 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
CLPTM1-207ENST00000587537 GSTO1P78417 241 aa12.51□□□□□ -0.41
CLPTM1-207ENST00000587537 AOC3Q16853 763 aa12.51□□□□□ -0.41
CLPTM1-207ENST00000587537 TSHZ3Q63HK5 1081 aa12.51□□□□□ -0.41
CLPTM1-207ENST00000587537 USP17L3A6NCW0 530 aa12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 USP17L4A6NCW7 530 aa12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 CYP2E1P05181 493 aaPredicted RBP12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 TNIP1Q15025 636 aa12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 UBE3CQ15386 1083 aa12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 TTLL5Q6EMB2 1281 aa12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 ARHGAP27Q6ZUM4 889 aa12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 USP17L1Q7RTZ2 530 aa12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 ZNF277Q9NRM2 450 aaPredicted RBP12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 DIAPH3Q9NSV4 1193 aa12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 LRP2BPQ9P2M1 347 aa12.5□□□□□ -0.41
CLPTM1-207ENST00000587537 WTIPA6NIX2 430 aaPredicted RBP12.49□□□□□ -0.41
CLPTM1-207ENST00000587537 LDHBP07195 334 aaKnown RBP12.49□□□□□ -0.41
CLPTM1-207ENST00000587537 LDHCP07864 332 aa12.49□□□□□ -0.41
CLPTM1-207ENST00000587537 RPS12P25398 132 aaKnown RBP12.49□□□□□ -0.41
CLPTM1-207ENST00000587537 HDLBPQ00341 1268 aaKnown RBP12.49□□□□□ -0.41
CLPTM1-207ENST00000587537 SCARF1Q14162 830 aa12.49□□□□□ -0.41
CLPTM1-207ENST00000587537 GPR162Q16538 588 aa12.49□□□□□ -0.41
CLPTM1-207ENST00000587537 MRIQ9BWK5 157 aa12.49□□□□□ -0.41
CLPTM1-207ENST00000587537 SBF1O95248 1867 aa12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 COL1A1P02452 1464 aaPredicted RBP12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 RNF113AO15541 343 aaKnown RBP12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 IDH1O75874 414 aaKnown RBP12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 MAP4K4O95819 1239 aaPredicted RBP12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 EIF6P56537 245 aaKnown RBP12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 GTF2IP78347 998 aa12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 CHAF1AQ13111 956 aaPredicted RBP12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 MFSD14BQ5SR56 506 aa12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 GPR101Q96P66 508 aaPredicted RBP12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 SNRKQ9NRH2 765 aa12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 HELLSQ9NRZ9 838 aa12.48□□□□□ -0.41
CLPTM1-207ENST00000587537 FZD9O00144 591 aa12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 REC8O95072 547 aa12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 VIL1P09327 827 aaKnown RBP12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 CHMLP26374 656 aa12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 DOK7Q18PE1 504 aa12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 SLC9C2Q5TAH2 1124 aa12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 SKAP1Q86WV1 359 aa12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 APPBP2Q92624 585 aa12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 RAI14Q9P0K7 980 aa12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 ABCF2Q9UG63 623 aa12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 IQSEC3Q9UPP2 1182 aaPredicted RBP12.47□□□□□ -0.41
CLPTM1-207ENST00000587537 RPAP1Q9BWH6 1393 aaPredicted RBP12.46□□□□□ -0.41
CLPTM1-207ENST00000587537 PLCG2P16885 1265 aa12.46□□□□□ -0.41
CLPTM1-207ENST00000587537 YBX3P16989 372 aaKnown RBP eCLIP12.46□□□□□ -0.413e-8■□□□□ 10.4
CLPTM1-207ENST00000587537 ADD2P35612 726 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms