RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 BCORQ6W2J9 1755 aa19.43■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 HCLS1P14317 486 aaPredicted RBP19.42■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 SUSD4Q5VX71 490 aa19.42■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 CCDC102BQ68D86 513 aa19.42■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 MB21D2Q8IYB1 491 aaPredicted RBP19.42■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 LPIN2Q92539 896 aa19.42■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 TFIP11Q9UBB9 837 aaKnown RBP19.42■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 WDR19Q8NEZ3 1342 aa19.42■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 UBAP1LF5GYI3 381 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 ATP6V1AP38606 617 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 CRKLP46109 303 aaKnown RBP19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 CCT2P78371 535 aaKnown RBP19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 CHST3Q7LGC8 479 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 CFAP45Q9UL16 551 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 CHD4Q14839 1912 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 SPATA31A5Q5VU36 1347 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 SPATA31A7Q8IWB4 1347 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 LOC102724428A0A0B4J2F2 783 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 LIG1P18858 919 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 MCM5P33992 734 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 SIK1P57059 783 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 PARP10Q53GL7 1025 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 MARCH10Q8NA82 808 aaPredicted RBP19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 NCOA7Q8NI08 942 aa19.41■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 GOLGA6L4A6NEF3 574 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 ZNF213O14771 459 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 CAMTA2O94983 1202 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 ADAMTS2O95450 1211 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 PHKA1P46020 1223 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 HAND2P61296 217 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 SLC9C2Q5TAH2 1124 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 UTP14AQ9BVJ6 771 aaKnown RBP19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 NUP62CLQ9H1M0 184 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 PIH1D3Q9NQM4 214 aaKnown RBP19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 RTL9Q8NET4 1388 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 C4AP0C0L4 1744 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 C4BP0C0L5 1744 aa19.4■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 BARGINQ6ZT62 677 aa19.39■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 DDX19AQ9NUU7 478 aaKnown RBP19.39■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 ZKSCAN5Q9Y2L8 839 aa19.39■□□□□ 0.7
APOC4-APOC2-201ENST00000585685 CCDC192P0DO97 292 aa19.39■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ADD1P35611 737 aaKnown RBP19.39■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 MAP3K11Q16584 847 aa19.39■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ATL3Q6DD88 541 aa19.39■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 NCOA5Q9HCD5 579 aaKnown RBP19.39■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 CARMIL3Q8ND23 1372 aa19.38■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 CASZ1Q86V15 1759 aa19.38■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 PRC1O43663 620 aa19.38■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 SLC5A1P13866 664 aa19.38■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 RBM43Q6ZSC3 357 aaKnown RBP19.38■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ACSBG1Q96GR2 724 aa19.38■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 PGBD1Q96JS3 809 aa19.38■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 TCRBV5S4A2TA0A5A2 114 aa19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ZNF500O60304 480 aaPredicted RBP19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ANTXR2P58335 489 aa19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ITPK1Q13572 414 aa19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 FBXO41Q8TF61 875 aa19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 DACT1Q9NYF0 836 aa19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 A0A1B0GUL6 1792 aa19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ZNF532Q9HCE3 1301 aa19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 IDH1O75874 414 aaKnown RBP19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 PDE6AP16499 860 aa19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 RALYLQ86SE5 291 aaKnown RBP19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 USP25Q9UHP3 1055 aa19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 DHX16O60231 1041 aaKnown RBP19.36■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 NTSR2O95665 410 aa19.36■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 FDPSP14324 419 aaKnown RBP19.36■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 CCDC152Q4G0S7 254 aa19.36■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 MPHOSPH8Q99549 860 aa19.36■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 CLSTN2Q9H4D0 955 aa19.36■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 RCOR1Q9UKL0 485 aa19.36■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ZMYM6O95789 1325 aa19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 KDM4AO75164 1064 aa19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 SPATA5Q8NB90 893 aa19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 HELBQ8NG08 1087 aaPredicted RBP19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 SMARCC1Q92922 1105 aaPredicted RBP19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 NBPF3Q9H094 633 aa19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 TNMDQ9H2S6 317 aa19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 GPHNQ9NQX3 736 aaPredicted RBP19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 HPS5Q9UPZ3 1129 aa19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 KLF18A0A0U1RQI7 1052 aa19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 RGS22Q8NE09 1264 aa19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 WWC3Q9ULE0 1092 aa19.35■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 TRDNQ13061 729 aa19.34■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ALX1Q15699 326 aa19.34■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 BICD2Q8TD16 824 aa19.34■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 SEC31BQ9NQW1 1179 aa19.34■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 TIAM2Q8IVF5 1701 aa19.33■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 A0A0G2JS52 829 aa19.33■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 ADCY5O95622 1261 aa19.33■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 PIP4K2BP78356 416 aa19.33■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 STRBPQ96SI9 672 aaKnown RBP19.33■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 NIP7Q9Y221 180 aaKnown RBP eCLIP19.33■□□□□ 0.69
APOC4-APOC2-201ENST00000585685 GOLGA8BA8MQT2 603 aa19.32■□□□□ 0.68
APOC4-APOC2-201ENST00000585685 NR1I2O75469 434 aa19.32■□□□□ 0.68
APOC4-APOC2-201ENST00000585685 IGHMBP2P38935 993 aaKnown RBP19.32■□□□□ 0.68
APOC4-APOC2-201ENST00000585685 TYRO3Q06418 890 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms