RNA–Protein interactions for RNA: ENST00000584335.5

SNX11-213, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-213ENST00000584335 UBE4AQ14139 1066 aa11.34□□□□□ -0.59
SNX11-213ENST00000584335 CRY2Q49AN0 593 aa11.34□□□□□ -0.59
SNX11-213ENST00000584335 DDX46Q7L014 1031 aaKnown RBP11.34□□□□□ -0.59
SNX11-213ENST00000584335 NLGN1Q8N2Q7 840 aa11.34□□□□□ -0.59
SNX11-213ENST00000584335 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
SNX11-213ENST00000584335 KCNB2Q92953 911 aa11.34□□□□□ -0.59
SNX11-213ENST00000584335 EDC3Q96F86 508 aaKnown RBP11.34□□□□□ -0.59
SNX11-213ENST00000584335 CAMKK2Q96RR4 588 aa11.34□□□□□ -0.59
SNX11-213ENST00000584335 HELLSQ9NRZ9 838 aa11.34□□□□□ -0.59
SNX11-213ENST00000584335 RYDENQ9NUL5 291 aaKnown RBP11.34□□□□□ -0.59
SNX11-213ENST00000584335 CCDC171Q6TFL3 1326 aa11.34□□□□□ -0.59
SNX11-213ENST00000584335 A0A0D9SFI3 127 aa11.33□□□□□ -0.6
SNX11-213ENST00000584335 KLRG2A4D1S0 409 aaPredicted RBP11.33□□□□□ -0.6
SNX11-213ENST00000584335 POLRMTO00411 1230 aaKnown RBP11.33□□□□□ -0.6
SNX11-213ENST00000584335 GTPBP6O43824 516 aaPredicted RBP11.33□□□□□ -0.6
SNX11-213ENST00000584335 ZFYP08048 801 aaPredicted RBP11.33□□□□□ -0.6
SNX11-213ENST00000584335 ST5P78524 1137 aa11.33□□□□□ -0.6
SNX11-213ENST00000584335 TTF1Q15361 905 aaPredicted RBP11.33□□□□□ -0.6
SNX11-213ENST00000584335 CCDC102BQ68D86 513 aa11.33□□□□□ -0.6
SNX11-213ENST00000584335 COL23A1Q86Y22 540 aaPredicted RBP11.33□□□□□ -0.6
SNX11-213ENST00000584335 HSCBQ8IWL3 235 aa11.33□□□□□ -0.6
SNX11-213ENST00000584335 CELF1Q92879 486 aaKnown RBP11.33□□□□□ -0.6
SNX11-213ENST00000584335 MAP4K1Q92918 833 aa11.33□□□□□ -0.6
SNX11-213ENST00000584335 FAM227BQ96M60 508 aa11.33□□□□□ -0.6
SNX11-213ENST00000584335 TMEM121BQ9BXQ6 578 aaPredicted RBP11.33□□□□□ -0.6
SNX11-213ENST00000584335 MINPP1Q9UNW1 487 aa11.33□□□□□ -0.6
SNX11-213ENST00000584335 DOCK2Q92608 1830 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 TAF1P21675 1872 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 NPHP1O15259 732 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 RNF113AO15541 343 aaKnown RBP11.32□□□□□ -0.6
SNX11-213ENST00000584335 MCAMP43121 646 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 DDR1Q08345 913 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 SCARF1Q14162 830 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 MCMDC2Q4G0Z9 681 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 ZMYM1Q5SVZ6 1142 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 HELBQ8NG08 1087 aaPredicted RBP11.32□□□□□ -0.6
SNX11-213ENST00000584335 ANKRD2Q9GZV1 360 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
SNX11-213ENST00000584335 NDUFB9Q9Y6M9 179 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 MYH7P12883 1935 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 ZNF804BA4D1E1 1349 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 PNPLA7Q6ZV29 1317 aa11.32□□□□□ -0.6
SNX11-213ENST00000584335 ST18O60284 1047 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 TAF5LO75529 589 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 HOXA10P31260 410 aaPredicted RBP11.31□□□□□ -0.6
SNX11-213ENST00000584335 ZAP70P43403 619 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 PHKA1P46020 1223 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 SLC4A3P48751 1232 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 PTH1RQ03431 593 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 GRAPQ13588 217 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 NECTIN1Q15223 517 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 ZSCAN25Q6NSZ9 544 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 ERICH6Q7L0X2 663 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 GRAPLQ8TC17 118 aaPredicted RBP11.31□□□□□ -0.6
SNX11-213ENST00000584335 LRRC37AA6NMS7 1700 aa11.31□□□□□ -0.6
SNX11-213ENST00000584335 ANKRD31Q8N7Z5 1873 aa11.3□□□□□ -0.6
SNX11-213ENST00000584335 K7ELQ4 463 aaPredicted RBP11.3□□□□□ -0.6
SNX11-213ENST00000584335 FKBP4Q02790 459 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNX11-213ENST00000584335 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNX11-213ENST00000584335 ANTXR1Q9H6X2 564 aa11.3□□□□□ -0.6
SNX11-213ENST00000584335 PALD1Q9ULE6 856 aa11.3□□□□□ -0.6
SNX11-213ENST00000584335 SNX14Q9Y5W7 946 aa11.3□□□□□ -0.6
SNX11-213ENST00000584335 PDS5AQ29RF7 1337 aaKnown RBP11.3□□□□□ -0.6
SNX11-213ENST00000584335 CYP2E1P05181 493 aaPredicted RBP11.29□□□□□ -0.6
SNX11-213ENST00000584335 MCM2P49736 904 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 SLC15A2Q16348 729 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 TSGA10IPQ3SY00 556 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 TMC4Q7Z404 712 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 ZNF589Q86UQ0 364 aaPredicted RBP11.29□□□□□ -0.6
SNX11-213ENST00000584335 CCDC24Q8N4L8 307 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 SPATA5Q8NB90 893 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 RPGRQ92834 1020 aaKnown RBP11.29□□□□□ -0.6
SNX11-213ENST00000584335 RBM17Q96I25 401 aaKnown RBP11.29□□□□□ -0.6
SNX11-213ENST00000584335 CRAMP1Q96RY5 1269 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 DSCC1Q9BVC3 393 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 BRIP1Q9BX63 1249 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 TM6SF1Q9BZW5 370 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 HMG20BQ9P0W2 317 aa11.29□□□□□ -0.6
SNX11-213ENST00000584335 RBM8AQ9Y5S9 174 aaKnown RBP11.29□□□□□ -0.6
SNX11-213ENST00000584335 SNAP23O00161 211 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 SEMA3EO15041 775 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 BBOX1O75936 387 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 CD2BP2O95400 341 aaKnown RBP11.28□□□□□ -0.6
SNX11-213ENST00000584335 BAG6P46379 1132 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 RASGRF1Q13972 1273 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 UBE3CQ15386 1083 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 EZH2Q15910 746 aaKnown RBP11.28□□□□□ -0.6
SNX11-213ENST00000584335 CAVIN4Q5BKX8 364 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 RNF20Q5VTR2 975 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 C15orf52Q6ZUT6 534 aaKnown RBP11.28□□□□□ -0.6
SNX11-213ENST00000584335 FBXO33Q7Z6M2 555 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 APPBP2Q92624 585 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
SNX11-213ENST00000584335 STK32BQ9NY57 414 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 MAST3O60307 1309 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 IRS2Q9Y4H2 1338 aa11.28□□□□□ -0.6
SNX11-213ENST00000584335 IGSF3O75054 1194 aa11.27□□□□□ -0.61
SNX11-213ENST00000584335 ZKSCAN1P17029 563 aaPredicted RBP11.27□□□□□ -0.61
SNX11-213ENST00000584335 ADD2P35612 726 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms