RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 MS4A4AQ96JQ5 239 aa14.82□□□□□ -0.04
NUP85-224ENST00000583948 CCT4P50991 539 aaKnown RBP14.81□□□□□ -0.04
NUP85-224ENST00000583948 TAF1CQ15572 869 aaPredicted RBP14.81□□□□□ -0.04
NUP85-224ENST00000583948 STRIP1Q5VSL9 837 aa14.81□□□□□ -0.04
NUP85-224ENST00000583948 NBPF11Q86T75 865 aa14.81□□□□□ -0.04
NUP85-224ENST00000583948 VEZTQ9HBM0 779 aa14.81□□□□□ -0.04
NUP85-224ENST00000583948 CCDC152Q4G0S7 254 aa14.8□□□□□ -0.04
NUP85-224ENST00000583948 RIC3Q7Z5B4 369 aa14.8□□□□□ -0.04
NUP85-224ENST00000583948 PRMT6Q96LA8 375 aaPredicted RBP14.8□□□□□ -0.04
NUP85-224ENST00000583948 GREM2Q9H772 168 aa14.8□□□□□ -0.04
NUP85-224ENST00000583948 STAP2Q9UGK3 403 aa14.8□□□□□ -0.04
NUP85-224ENST00000583948 MAPK8IP3Q9UPT6 1336 aa14.8□□□□□ -0.04
NUP85-224ENST00000583948 MED23Q9ULK4 1368 aa14.8□□□□□ -0.04
NUP85-224ENST00000583948 TESPA1A2RU30 521 aaPredicted RBP14.79□□□□□ -0.04
NUP85-224ENST00000583948 PPP1R12BO60237 982 aaPredicted RBP14.79□□□□□ -0.04
NUP85-224ENST00000583948 PDE8AO60658 829 aa14.79□□□□□ -0.04
NUP85-224ENST00000583948 DLGAP5Q15398 846 aa14.79□□□□□ -0.04
NUP85-224ENST00000583948 CCL15-CCL14A0A0B4J2E2 113 aa14.78□□□□□ -0.04
NUP85-224ENST00000583948 CCL15Q16663 113 aa14.78□□□□□ -0.04
NUP85-224ENST00000583948 OTUD7BQ6GQQ9 843 aa14.78□□□□□ -0.04
NUP85-224ENST00000583948 CCDC146Q8IYE0 955 aa14.78□□□□□ -0.04
NUP85-224ENST00000583948 COL25A1Q9BXS0 654 aaPredicted RBP14.78□□□□□ -0.04
NUP85-224ENST00000583948 VCANP13611 3396 aa14.77□□□□□ -0.04
NUP85-224ENST00000583948 ZBTB7BO15156 539 aaPredicted RBP14.77□□□□□ -0.05
NUP85-224ENST00000583948 TMPOP42166 694 aaKnown RBP14.77□□□□□ -0.05
NUP85-224ENST00000583948 HNRNPUQ00839 825 aaKnown RBP eCLIP14.77□□□□□ -0.05
NUP85-224ENST00000583948 TRIM28Q13263 835 aaKnown RBP14.77□□□□□ -0.05
NUP85-224ENST00000583948 RASA3Q14644 834 aa14.77□□□□□ -0.05
NUP85-224ENST00000583948 CFAP100Q494V2 611 aa14.77□□□□□ -0.05
NUP85-224ENST00000583948 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.77□□□□□ -0.05
NUP85-224ENST00000583948 UBE2Q1Q7Z7E8 422 aa14.77□□□□□ -0.05
NUP85-224ENST00000583948 COA1Q9GZY4 146 aa14.77□□□□□ -0.05
NUP85-224ENST00000583948 EYSQ5T1H1 3165 aa14.77□□□□□ -0.05
NUP85-224ENST00000583948 ECM29Q5VYK3 1845 aa14.77□□□□□ -0.05
NUP85-224ENST00000583948 ELL2O00472 640 aaPredicted RBP14.76□□□□□ -0.05
NUP85-224ENST00000583948 CHL1O00533 1208 aa14.76□□□□□ -0.05
NUP85-224ENST00000583948 PCCAP05165 728 aaPredicted RBP14.76□□□□□ -0.05
NUP85-224ENST00000583948 ZFYVE28Q9HCC9 887 aa14.76□□□□□ -0.05
NUP85-224ENST00000583948 DBF4Q9UBU7 674 aaPredicted RBP14.76□□□□□ -0.05
NUP85-224ENST00000583948 MYO3BQ8WXR4 1341 aa14.75□□□□□ -0.05
NUP85-224ENST00000583948 ALPK3Q96L96 1907 aa14.75□□□□□ -0.05
NUP85-224ENST00000583948 IREB2P48200 963 aaKnown RBP14.75□□□□□ -0.05
NUP85-224ENST00000583948 CTSWP56202 376 aa14.75□□□□□ -0.05
NUP85-224ENST00000583948 LACTBP83111 547 aaPredicted RBP14.75□□□□□ -0.05
NUP85-224ENST00000583948 ANKRD13AQ8IZ07 590 aa14.75□□□□□ -0.05
NUP85-224ENST00000583948 HELBQ8NG08 1087 aaPredicted RBP14.75□□□□□ -0.05
NUP85-224ENST00000583948 TTLL11Q8NHH1 800 aa14.75□□□□□ -0.05
NUP85-224ENST00000583948 CPA4Q9UI42 421 aa14.75□□□□□ -0.05
NUP85-224ENST00000583948 ZNF804BA4D1E1 1349 aa14.74□□□□□ -0.05
NUP85-224ENST00000583948 CCL5P13501 91 aa14.74□□□□□ -0.05
NUP85-224ENST00000583948 MNX1P50219 401 aaPredicted RBP14.74□□□□□ -0.05
NUP85-224ENST00000583948 VGLL4Q14135 290 aa14.74□□□□□ -0.05
NUP85-224ENST00000583948 DUSP27Q5VZP5 1158 aa14.74□□□□□ -0.05
NUP85-224ENST00000583948 BSDC1Q9NW68 430 aaPredicted RBP14.74□□□□□ -0.05
NUP85-224ENST00000583948 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
NUP85-224ENST00000583948 BTBD19C9JJ37 291 aa14.73□□□□□ -0.05
NUP85-224ENST00000583948 TAF5LO75529 589 aa14.73□□□□□ -0.05
NUP85-224ENST00000583948 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
NUP85-224ENST00000583948 RBM5P52756 815 aaKnown RBP eCLIP14.73□□□□□ -0.058e-6■■■■□ 20.7
NUP85-224ENST00000583948 WDR43Q15061 677 aaKnown RBP eCLIP14.73□□□□□ -0.05
NUP85-224ENST00000583948 SUPT20HL1Q3ZLR7 823 aa14.73□□□□□ -0.05
NUP85-224ENST00000583948 DEFB123Q8N688 67 aa14.73□□□□□ -0.05
NUP85-224ENST00000583948 TRIM47Q96LD4 638 aa14.73□□□□□ -0.05
NUP85-224ENST00000583948 CD209Q9NNX6 404 aa14.73□□□□□ -0.05
NUP85-224ENST00000583948 HYPKQ9NX55 129 aa14.73□□□□□ -0.05
NUP85-224ENST00000583948 CWC25Q9NXE8 425 aaPredicted RBP14.73□□□□□ -0.05
NUP85-224ENST00000583948 TRIM35Q9UPQ4 493 aa14.73□□□□□ -0.05
NUP85-224ENST00000583948 LAMA2P24043 3122 aaKnown RBP14.73□□□□□ -0.05
NUP85-224ENST00000583948 COL1A1P02452 1464 aaPredicted RBP14.72□□□□□ -0.05
NUP85-224ENST00000583948 TCP10L2B9ZVM9 353 aa14.72□□□□□ -0.05
NUP85-224ENST00000583948 TEPSINQ96N21 525 aa14.72□□□□□ -0.05
NUP85-224ENST00000583948 TMEM39BQ9GZU3 492 aa14.72□□□□□ -0.05
NUP85-224ENST00000583948 RNF208Q9H0X6 261 aa14.72□□□□□ -0.05
NUP85-224ENST00000583948 TDRD3Q9H7E2 651 aaKnown RBP14.72□□□□□ -0.05
NUP85-224ENST00000583948 MYH3P11055 1940 aa14.71□□□□□ -0.05
NUP85-224ENST00000583948 SPTBN5Q9NRC6 3674 aaKnown RBP14.71□□□□□ -0.05
NUP85-224ENST00000583948 IGKV5-2P06315 115 aa14.71□□□□□ -0.05
NUP85-224ENST00000583948 OSBPP22059 807 aa14.71□□□□□ -0.05
NUP85-224ENST00000583948 GJA8P48165 433 aa14.71□□□□□ -0.05
NUP85-224ENST00000583948 GOLGA2Q08379 1002 aa14.71□□□□□ -0.05
NUP85-224ENST00000583948 CCDC191Q8NCU4 936 aa14.71□□□□□ -0.05
NUP85-224ENST00000583948 CDC5LQ99459 802 aaKnown RBP14.71□□□□□ -0.05
NUP85-224ENST00000583948 UNC93B1Q9H1C4 597 aa14.71□□□□□ -0.05
NUP85-224ENST00000583948 IRS2Q9Y4H2 1338 aa14.7□□□□□ -0.06
NUP85-224ENST00000583948 TLR2O60603 784 aa14.7□□□□□ -0.06
NUP85-224ENST00000583948 PSMC4P43686 418 aa14.7□□□□□ -0.06
NUP85-224ENST00000583948 CACNB3P54284 484 aa14.7□□□□□ -0.06
NUP85-224ENST00000583948 CWF19L2Q2TBE0 894 aaKnown RBP14.7□□□□□ -0.06
NUP85-224ENST00000583948 MTMR14Q8NCE2 650 aa14.7□□□□□ -0.06
NUP85-224ENST00000583948 ZKSCAN4Q969J2 545 aaPredicted RBP14.7□□□□□ -0.06
NUP85-224ENST00000583948 BABAM1Q9NWV8 329 aa14.7□□□□□ -0.06
NUP85-224ENST00000583948 BIN2Q9UBW5 565 aaPredicted RBP14.7□□□□□ -0.06
NUP85-224ENST00000583948 ZNF70Q9UC06 446 aaPredicted RBP14.7□□□□□ -0.06
NUP85-224ENST00000583948 ZMYND8Q9ULU4 1186 aaPredicted RBP14.7□□□□□ -0.06
NUP85-224ENST00000583948 GABRQQ9UN88 632 aa14.7□□□□□ -0.06
NUP85-224ENST00000583948 RIPOR2Q9Y4F9 1068 aa14.7□□□□□ -0.06
NUP85-224ENST00000583948 FARP2O94887 1054 aaPredicted RBP14.69□□□□□ -0.06
NUP85-224ENST00000583948 GRK4P32298 578 aa14.69□□□□□ -0.06
NUP85-224ENST00000583948 GTF2A2P52657 109 aa14.69□□□□□ -0.06
NUP85-224ENST00000583948 GRIK5Q16478 980 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms