RNA–Protein interactions for RNA: ENST00000582509.1

TRAPPC8-209, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-209ENST00000582509 CHRNA4P43681 627 aa9.07□□□□□ -0.96
TRAPPC8-209ENST00000582509 SUZ12Q15022 739 aaKnown RBP9.07□□□□□ -0.96
TRAPPC8-209ENST00000582509 DDX54Q8TDD1 881 aaKnown RBP9.07□□□□□ -0.96
TRAPPC8-209ENST00000582509 SOX17Q9H6I2 414 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC8-209ENST00000582509 ANKRD33BA6NCL7 494 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 GIPC1O14908 333 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 XRCC5P13010 732 aaKnown RBP9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 CDC25BP30305 580 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 GATA4P43694 442 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 C19orf57Q0VDD7 668 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 ADGRE1Q14246 886 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 TXNDC11Q6PKC3 985 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 ADAMTSL4Q6UY14 1074 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 TMEM130Q8N3G9 435 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 EPS8L3Q8TE67 593 aaKnown RBP9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 FRMD6Q96NE9 622 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 SRCIN1Q9C0H9 1055 aa9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 CLEC4MQ9H2X3 399 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC8-209ENST00000582509 ITPKAP23677 461 aa9.05□□□□□ -0.96
TRAPPC8-209ENST00000582509 VN1R5Q7Z5H4 357 aa9.05□□□□□ -0.96
TRAPPC8-209ENST00000582509 P4HBP07237 508 aaKnown RBP9.04□□□□□ -0.96
TRAPPC8-209ENST00000582509 GRIA4P48058 902 aa9.04□□□□□ -0.96
TRAPPC8-209ENST00000582509 GRM2Q14416 872 aa9.04□□□□□ -0.96
TRAPPC8-209ENST00000582509 MBTPS1Q14703 1052 aa9.04□□□□□ -0.96
TRAPPC8-209ENST00000582509 RPS26P11Q5JNZ5 115 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC8-209ENST00000582509 SHISA2Q6UWI4 295 aa9.04□□□□□ -0.96
TRAPPC8-209ENST00000582509 TXNRD3Q86VQ6 643 aa9.04□□□□□ -0.96
TRAPPC8-209ENST00000582509 SLC7A3Q8WY07 619 aa9.04□□□□□ -0.96
TRAPPC8-209ENST00000582509 SPOCK3Q9BQ16 436 aa9.04□□□□□ -0.96
TRAPPC8-209ENST00000582509 SPG7Q9UQ90 795 aa9.04□□□□□ -0.96
TRAPPC8-209ENST00000582509 TMEM238LA0A1B0GVL6 79 aa9.03□□□□□ -0.96
TRAPPC8-209ENST00000582509 ITGB2P05107 769 aa9.03□□□□□ -0.96
TRAPPC8-209ENST00000582509 LDHBP07195 334 aaKnown RBP9.03□□□□□ -0.96
TRAPPC8-209ENST00000582509 ESRRAP11474 423 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC8-209ENST00000582509 PCDH1Q08174 1060 aa9.03□□□□□ -0.96
TRAPPC8-209ENST00000582509 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRAPPC8-209ENST00000582509 EAPPQ56P03 285 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC8-209ENST00000582509 GALNT11Q8NCW6 608 aa9.03□□□□□ -0.96
TRAPPC8-209ENST00000582509 ABCB6Q9NP58 842 aa9.03□□□□□ -0.96
TRAPPC8-209ENST00000582509 METTL12A8MUP2 240 aa9.02□□□□□ -0.97
TRAPPC8-209ENST00000582509 SOX1O00570 391 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC8-209ENST00000582509 DNAJC14Q6Y2X3 702 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC8-209ENST00000582509 CARD10Q9BWT7 1032 aa9.02□□□□□ -0.97
TRAPPC8-209ENST00000582509 BCO2Q9BYV7 579 aa9.02□□□□□ -0.97
TRAPPC8-209ENST00000582509 AKTIPQ9H8T0 292 aa9.02□□□□□ -0.97
TRAPPC8-209ENST00000582509 PRPF40AO75400 957 aaKnown RBP9.01□□□□□ -0.97
TRAPPC8-209ENST00000582509 PROCP04070 461 aa9.01□□□□□ -0.97
TRAPPC8-209ENST00000582509 DUOXA2Q1HG44 320 aa9.01□□□□□ -0.97
TRAPPC8-209ENST00000582509 SPRED3Q2MJR0 410 aa9.01□□□□□ -0.97
TRAPPC8-209ENST00000582509 TMCO4Q5TGY1 634 aa9.01□□□□□ -0.97
TRAPPC8-209ENST00000582509 DTHD1Q6ZMT9 781 aa9.01□□□□□ -0.97
TRAPPC8-209ENST00000582509 KLHDC7BQ96G42 594 aa9.01□□□□□ -0.97
TRAPPC8-209ENST00000582509 ZNF576Q9H609 170 aa9.01□□□□□ -0.97
TRAPPC8-209ENST00000582509 ITGAEP38570 1179 aa9□□□□□ -0.97
TRAPPC8-209ENST00000582509 FOXD4L6Q3SYB3 417 aaPredicted RBP9□□□□□ -0.97
TRAPPC8-209ENST00000582509 HP1BP3Q5SSJ5 553 aaPredicted RBP9□□□□□ -0.97
TRAPPC8-209ENST00000582509 FOXD4L3Q6VB84 417 aaPredicted RBP9□□□□□ -0.97
TRAPPC8-209ENST00000582509 GLIS3Q8NEA6 775 aa9□□□□□ -0.97
TRAPPC8-209ENST00000582509 WFDC12Q8WWY7 111 aa9□□□□□ -0.97
TRAPPC8-209ENST00000582509 F8W735 103 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC8-209ENST00000582509 TM4SF5O14894 197 aa8.99□□□□□ -0.97
TRAPPC8-209ENST00000582509 B3GALT4O96024 378 aa8.99□□□□□ -0.97
TRAPPC8-209ENST00000582509 GSTT1P30711 240 aa8.99□□□□□ -0.97
TRAPPC8-209ENST00000582509 PI16Q6UXB8 463 aa8.99□□□□□ -0.97
TRAPPC8-209ENST00000582509 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.99□□□□□ -0.97
TRAPPC8-209ENST00000582509 NPAS4Q8IUM7 802 aa8.99□□□□□ -0.97
TRAPPC8-209ENST00000582509 CEP41Q9BYV8 373 aa8.99□□□□□ -0.97
TRAPPC8-209ENST00000582509 CYP11A1P05108 521 aa8.98□□□□□ -0.97
TRAPPC8-209ENST00000582509 FCGRTP55899 365 aa8.98□□□□□ -0.97
TRAPPC8-209ENST00000582509 HNRNPUQ00839 825 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRAPPC8-209ENST00000582509 GSTM4Q03013 218 aa8.98□□□□□ -0.97
TRAPPC8-209ENST00000582509 NXPE4Q6UWF7 544 aa8.98□□□□□ -0.97
TRAPPC8-209ENST00000582509 ACAD11Q709F0 780 aa8.98□□□□□ -0.97
TRAPPC8-209ENST00000582509 IREB2P48200 963 aaKnown RBP8.97□□□□□ -0.97
TRAPPC8-209ENST00000582509 NLRP12P59046 1061 aa8.97□□□□□ -0.97
TRAPPC8-209ENST00000582509 PPP2R3AQ06190 1150 aa8.97□□□□□ -0.97
TRAPPC8-209ENST00000582509 RNF208Q9H0X6 261 aa8.97□□□□□ -0.97
TRAPPC8-209ENST00000582509 BCL11AQ9H165 835 aa8.97□□□□□ -0.97
TRAPPC8-209ENST00000582509 FAM8A1Q9UBU6 413 aa8.97□□□□□ -0.97
TRAPPC8-209ENST00000582509 WWC3Q9ULE0 1092 aa8.97□□□□□ -0.97
TRAPPC8-209ENST00000582509 NOS3P29474 1203 aa8.96□□□□□ -0.98
TRAPPC8-209ENST00000582509 GNA15P30679 374 aa8.96□□□□□ -0.98
TRAPPC8-209ENST00000582509 AP3B2Q13367 1082 aa8.96□□□□□ -0.98
TRAPPC8-209ENST00000582509 ZNF423Q2M1K9 1284 aa8.96□□□□□ -0.98
TRAPPC8-209ENST00000582509 FOXD4L4Q8WXT5 416 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC8-209ENST00000582509 C12orf49Q9H741 205 aa8.96□□□□□ -0.98
TRAPPC8-209ENST00000582509 KCNK4Q9NYG8 393 aa8.96□□□□□ -0.98
TRAPPC8-209ENST00000582509 PPM1HQ9ULR3 514 aa8.96□□□□□ -0.98
TRAPPC8-209ENST00000582509 ADAM11O75078 769 aa8.95□□□□□ -0.98
TRAPPC8-209ENST00000582509 ANKRD34AQ69YU3 496 aa8.95□□□□□ -0.98
TRAPPC8-209ENST00000582509 Q6ZS46 218 aa8.95□□□□□ -0.98
TRAPPC8-209ENST00000582509 USP26Q9BXU7 913 aa8.95□□□□□ -0.98
TRAPPC8-209ENST00000582509 MEGF11A6BM72 1044 aa8.94□□□□□ -0.98
TRAPPC8-209ENST00000582509 UVSSAQ2YD98 709 aa8.94□□□□□ -0.98
TRAPPC8-209ENST00000582509 KIAA1211Q6ZU35 1233 aa8.94□□□□□ -0.98
TRAPPC8-209ENST00000582509 ANKRD24Q8TF21 1146 aa8.94□□□□□ -0.98
TRAPPC8-209ENST00000582509 UBASH3BQ8TF42 649 aa8.94□□□□□ -0.98
TRAPPC8-209ENST00000582509 CORO1BQ9BR76 489 aa8.94□□□□□ -0.98
TRAPPC8-209ENST00000582509 RUSC1Q9BVN2 902 aa8.94□□□□□ -0.98
TRAPPC8-209ENST00000582509 CEP44Q9C0F1 390 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms