RNA–Protein interactions for RNA: ENST00000582509.1

TRAPPC8-209, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-209ENST00000582509 AEBP2Q6ZN18 517 aaPredicted RBP27.9■■■□□ 2.06
TRAPPC8-209ENST00000582509 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
TRAPPC8-209ENST00000582509 PHF23Q9BUL5 403 aaPredicted RBP23.96■■□□□ 1.43
TRAPPC8-209ENST00000582509 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
TRAPPC8-209ENST00000582509 PLPPR3Q6T4P5 718 aa22.29■■□□□ 1.16
TRAPPC8-209ENST00000582509 FOXD1Q16676 465 aa22.02■■□□□ 1.12
TRAPPC8-209ENST00000582509 ADRA2BP18089 450 aa21.12■□□□□ 0.97
TRAPPC8-209ENST00000582509 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
TRAPPC8-209ENST00000582509 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC8-209ENST00000582509 MSH5O43196 834 aa20.47■□□□□ 0.87
TRAPPC8-209ENST00000582509 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
TRAPPC8-209ENST00000582509 PPP4R3CPQ6ZMV5 832 aa19.56■□□□□ 0.72
TRAPPC8-209ENST00000582509 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
TRAPPC8-209ENST00000582509 NCBP3Q53F19 620 aaKnown RBP19.17■□□□□ 0.66
TRAPPC8-209ENST00000582509 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC8-209ENST00000582509 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
TRAPPC8-209ENST00000582509 KCNA4P22459 653 aa19.03■□□□□ 0.64
TRAPPC8-209ENST00000582509 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
TRAPPC8-209ENST00000582509 NPM3O75607 178 aaKnown RBP18.74■□□□□ 0.59
TRAPPC8-209ENST00000582509 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC8-209ENST00000582509 HOXD11P31277 338 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC8-209ENST00000582509 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
TRAPPC8-209ENST00000582509 SLC4A1APQ9BWU0 796 aaKnown RBP18.2■□□□□ 0.5
TRAPPC8-209ENST00000582509 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
TRAPPC8-209ENST00000582509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.76■□□□□ 0.43
TRAPPC8-209ENST00000582509 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
TRAPPC8-209ENST00000582509 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
TRAPPC8-209ENST00000582509 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
TRAPPC8-209ENST00000582509 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
TRAPPC8-209ENST00000582509 ZBTB22O15209 634 aa17.45■□□□□ 0.38
TRAPPC8-209ENST00000582509 MYCNP04198 464 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC8-209ENST00000582509 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC8-209ENST00000582509 CSRNP3Q8WYN3 585 aa17.39■□□□□ 0.37
TRAPPC8-209ENST00000582509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC8-209ENST00000582509 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
TRAPPC8-209ENST00000582509 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
TRAPPC8-209ENST00000582509 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC8-209ENST00000582509 APLP2Q06481 763 aa17.23■□□□□ 0.35
TRAPPC8-209ENST00000582509 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.32
TRAPPC8-209ENST00000582509 CACNB1Q02641 598 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC8-209ENST00000582509 CAPN15O75808 1086 aa16.9■□□□□ 0.3
TRAPPC8-209ENST00000582509 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC8-209ENST00000582509 SPINK5Q9NQ38 1064 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC8-209ENST00000582509 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC8-209ENST00000582509 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC8-209ENST00000582509 DSG3P32926 999 aa16.58■□□□□ 0.24
TRAPPC8-209ENST00000582509 POLA2Q14181 598 aa16.52■□□□□ 0.24
TRAPPC8-209ENST00000582509 ABCB7O75027 752 aa16.5■□□□□ 0.23
TRAPPC8-209ENST00000582509 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC8-209ENST00000582509 FBLN2P98095 1184 aa16.28■□□□□ 0.2
TRAPPC8-209ENST00000582509 MKRN4PQ13434 485 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC8-209ENST00000582509 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
TRAPPC8-209ENST00000582509 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
TRAPPC8-209ENST00000582509 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
TRAPPC8-209ENST00000582509 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
TRAPPC8-209ENST00000582509 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
TRAPPC8-209ENST00000582509 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
TRAPPC8-209ENST00000582509 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC8-209ENST00000582509 FKBP8Q14318 412 aa15.77■□□□□ 0.12
TRAPPC8-209ENST00000582509 SSUH2Q9Y2M2 353 aa15.7■□□□□ 0.1
TRAPPC8-209ENST00000582509 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
TRAPPC8-209ENST00000582509 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
TRAPPC8-209ENST00000582509 PROM2Q8N271 834 aa15.53■□□□□ 0.08
TRAPPC8-209ENST00000582509 REM2Q8IYK8 340 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC8-209ENST00000582509 SPDYE1Q8NFV5 336 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC8-209ENST00000582509 STAG3Q9UJ98 1225 aa15.41■□□□□ 0.06
TRAPPC8-209ENST00000582509 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
TRAPPC8-209ENST00000582509 PITPNM1O00562 1244 aa15.28■□□□□ 0.04
TRAPPC8-209ENST00000582509 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
TRAPPC8-209ENST00000582509 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
TRAPPC8-209ENST00000582509 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
TRAPPC8-209ENST00000582509 PLEKHG5O94827 1062 aa15.07■□□□□ 0
TRAPPC8-209ENST00000582509 VASPP50552 380 aaPredicted RBP15.04■□□□□ -0
TRAPPC8-209ENST00000582509 FXR2P51116 673 aaKnown RBP eCLIP15.02■□□□□ -0
TRAPPC8-209ENST00000582509 MIER1Q8N108 512 aa15.01□□□□□ -0.01
TRAPPC8-209ENST00000582509 PLCD3Q8N3E9 789 aa15□□□□□ -0.01
TRAPPC8-209ENST00000582509 POTEHQ6S545 545 aa14.98□□□□□ -0.01
TRAPPC8-209ENST00000582509 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
TRAPPC8-209ENST00000582509 ZBTB47Q9UFB7 747 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC8-209ENST00000582509 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
TRAPPC8-209ENST00000582509 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
TRAPPC8-209ENST00000582509 CHADLQ6NUI6 762 aa14.84□□□□□ -0.03
TRAPPC8-209ENST00000582509 KLHL34Q8N239 644 aa14.82□□□□□ -0.04
TRAPPC8-209ENST00000582509 NPM1P06748 294 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRAPPC8-209ENST00000582509 IFNLR1Q8IU57 520 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC8-209ENST00000582509 FARP1Q9Y4F1 1045 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC8-209ENST00000582509 MNX1P50219 401 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC8-209ENST00000582509 SPOCK2Q92563 424 aa14.69□□□□□ -0.06
TRAPPC8-209ENST00000582509 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC8-209ENST00000582509 NUBP1P53384 320 aa14.57□□□□□ -0.08
TRAPPC8-209ENST00000582509 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
TRAPPC8-209ENST00000582509 GSE1Q14687 1217 aa14.53□□□□□ -0.08
TRAPPC8-209ENST00000582509 C19orf67A6NJJ6 358 aa14.51□□□□□ -0.09
TRAPPC8-209ENST00000582509 HAX1O00165 279 aa14.51□□□□□ -0.09
TRAPPC8-209ENST00000582509 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
TRAPPC8-209ENST00000582509 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
TRAPPC8-209ENST00000582509 DCAF8Q5TAQ9 597 aa14.47□□□□□ -0.09
TRAPPC8-209ENST00000582509 AMER1Q5JTC6 1135 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC8-209ENST00000582509 TSPYL2Q9H2G4 693 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC8-209ENST00000582509 CIZ1Q9ULV3 898 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms