RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ZNF532Q9HCE3 1301 aa17.74■□□□□ 0.43
CDK5RAP3-218ENST00000580391 FOXP2O15409 715 aa17.74■□□□□ 0.43
CDK5RAP3-218ENST00000580391 CYP21A2P08686 494 aa17.74■□□□□ 0.43
CDK5RAP3-218ENST00000580391 FAM84BQ96KN1 310 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP3-218ENST00000580391 TCRBV5S4A2TA0A5A2 114 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 GPAA1O43292 621 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 MSL1Q68DK7 614 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 NLGN1Q8N2Q7 840 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 ZGPATQ8N5A5 531 aaKnown RBP17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 CAMKK2Q96RR4 588 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 CYP46A1Q9Y6A2 500 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 CHD4Q14839 1912 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 LTBP1Q14766 1721 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 MAST2Q6P0Q8 1798 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 A0A0G2JLW4 131 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 UBE3CQ15386 1083 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 TSGA10IPQ3SY00 556 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 CAVIN4Q5BKX8 364 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 RUFY3Q7L099 469 aa17.73■□□□□ 0.43
CDK5RAP3-218ENST00000580391 CCDC88AQ3V6T2 1871 aa17.72■□□□□ 0.43
CDK5RAP3-218ENST00000580391 VPS37DQ86XT2 251 aa17.72■□□□□ 0.43
CDK5RAP3-218ENST00000580391 GNL3LQ9NVN8 582 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-218ENST00000580391 CIZ1Q9ULV3 898 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-218ENST00000580391 IRS2Q9Y4H2 1338 aa17.72■□□□□ 0.43
CDK5RAP3-218ENST00000580391 MMP10P09238 476 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 PSMA5P28066 241 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 CUL4AQ13619 759 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 MAGEB6Q8N7X4 407 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 IL27Q8NEV9 243 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 LARP6Q9BRS8 491 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 PDRG1Q9NUG6 133 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 FRAT2O75474 233 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 MAP3K12Q12852 859 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 TTLL5Q6EMB2 1281 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 BLOC1S2Q6QNY1 142 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 STOX1Q6ZVD7 989 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 FBXO33Q7Z6M2 555 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 TXNRD3Q86VQ6 643 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 RBM17Q96I25 401 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
CDK5RAP3-218ENST00000580391 KLRG2A4D1S0 409 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP3-218ENST00000580391 ANKIB1Q9P2G1 1089 aa17.7■□□□□ 0.42
CDK5RAP3-218ENST00000580391 XDHP47989 1333 aa17.7■□□□□ 0.42
CDK5RAP3-218ENST00000580391 RPS6KB1P23443 525 aa17.7■□□□□ 0.42
CDK5RAP3-218ENST00000580391 KRT32Q14532 448 aa17.7■□□□□ 0.42
CDK5RAP3-218ENST00000580391 LARGE1O95461 756 aa17.69■□□□□ 0.42
CDK5RAP3-218ENST00000580391 HOXA10P31260 410 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-218ENST00000580391 SLC15A2Q16348 729 aa17.69■□□□□ 0.42
CDK5RAP3-218ENST00000580391 HIBADHP31937 336 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 GPSM2P81274 684 aa17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 GPR101Q96P66 508 aaPredicted RBP17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 LRP2BPQ9P2M1 347 aa17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 ABCF2Q9UG63 623 aa17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 DENND2AQ9ULE3 1009 aa17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 PARP3Q9Y6F1 533 aa17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 KIAA1551Q9HCM1 1747 aa17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 NEK1Q96PY6 1258 aa17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 BRIP1Q9BX63 1249 aa17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 STK32BQ9NY57 414 aa17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 LIMCH1Q9UPQ0 1083 aa17.68■□□□□ 0.42
CDK5RAP3-218ENST00000580391 SEMA3EO15041 775 aa17.67■□□□□ 0.42
CDK5RAP3-218ENST00000580391 RAB3GAP1Q15042 981 aa17.67■□□□□ 0.42
CDK5RAP3-218ENST00000580391 AIDAQ96BJ3 306 aa17.67■□□□□ 0.42
CDK5RAP3-218ENST00000580391 CRAMP1Q96RY5 1269 aa17.67■□□□□ 0.42
CDK5RAP3-218ENST00000580391 LEMD3Q9Y2U8 911 aa17.67■□□□□ 0.42
CDK5RAP3-218ENST00000580391 MBD4O95243 580 aa17.66■□□□□ 0.42
CDK5RAP3-218ENST00000580391 FGAP02671 866 aa17.66■□□□□ 0.42
CDK5RAP3-218ENST00000580391 HAND2P61296 217 aa17.66■□□□□ 0.42
CDK5RAP3-218ENST00000580391 DEFB132Q7Z7B7 95 aa17.66■□□□□ 0.42
CDK5RAP3-218ENST00000580391 INTS4Q96HW7 963 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-218ENST00000580391 STRBPQ96SI9 672 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-218ENST00000580391 ARMT1Q9H993 441 aa17.66■□□□□ 0.42
CDK5RAP3-218ENST00000580391 CWC22Q9HCG8 908 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-218ENST00000580391 RAI14Q9P0K7 980 aa17.66■□□□□ 0.42
CDK5RAP3-218ENST00000580391 PDS5AQ29RF7 1337 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 BAZ2AQ9UIF9 1905 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 E7EWF7 191 aa17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 UFL1O94874 794 aa17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 CHAF1AQ13111 956 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 PKP1Q13835 747 aa17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 TOB2Q14106 344 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 ADGRA1Q86SQ6 560 aa17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 CTNNA3Q9UI47 895 aa17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 NSFL1CQ9UNZ2 370 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 DUOX1Q9NRD9 1551 aa17.65■□□□□ 0.42
CDK5RAP3-218ENST00000580391 PPEF1O14829 653 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 BBOX1O75936 387 aa17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 SRGNP10124 158 aa17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 LCORLQ8N3X6 602 aa17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 TNPO1Q92973 898 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 TPCN1Q9ULQ1 816 aa17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 JAG2Q9Y219 1238 aa17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 TIAM2Q8IVF5 1701 aa17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 CYP7A1P22680 504 aa17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 BAG6P46379 1132 aa17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ST3GAL1Q11201 340 aa17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 IMMTQ16891 758 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 EPB41L4AQ9HCS5 686 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-218ENST00000580391 SF3B2Q13435 895 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms