RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 DLGAP5Q15398 846 aa12.02□□□□□ -0.49
SMARCD2-208ENST00000580054 OTUD7BQ6GQQ9 843 aa12.02□□□□□ -0.49
SMARCD2-208ENST00000580054 SLC17A8Q8NDX2 589 aa12.02□□□□□ -0.49
SMARCD2-208ENST00000580054 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.49
SMARCD2-208ENST00000580054 SHISA4Q96DD7 197 aa12.02□□□□□ -0.49
SMARCD2-208ENST00000580054 ARHGAP39Q9C0H5 1083 aa12.02□□□□□ -0.49
SMARCD2-208ENST00000580054 ELP3Q9H9T3 547 aa12.02□□□□□ -0.49
SMARCD2-208ENST00000580054 BSDC1Q9NW68 430 aaPredicted RBP12.02□□□□□ -0.49
SMARCD2-208ENST00000580054 ZNF804BA4D1E1 1349 aa12.02□□□□□ -0.49
SMARCD2-208ENST00000580054 ARAP2Q8WZ64 1704 aa12.02□□□□□ -0.49
SMARCD2-208ENST00000580054 F8W031 263 aaPredicted RBP12.01□□□□□ -0.49
SMARCD2-208ENST00000580054 USP2O75604 605 aaPredicted RBP12.01□□□□□ -0.49
SMARCD2-208ENST00000580054 TTLL11Q8NHH1 800 aa12.01□□□□□ -0.49
SMARCD2-208ENST00000580054 BRI3BPQ8WY22 251 aa12.01□□□□□ -0.49
SMARCD2-208ENST00000580054 OPTNQ96CV9 577 aa12.01□□□□□ -0.49
SMARCD2-208ENST00000580054 MS4A4AQ96JQ5 239 aa12.01□□□□□ -0.49
SMARCD2-208ENST00000580054 VEZTQ9HBM0 779 aa12.01□□□□□ -0.49
SMARCD2-208ENST00000580054 PPP2R3BQ9Y5P8 575 aa12.01□□□□□ -0.49
SMARCD2-208ENST00000580054 IREB2P48200 963 aaKnown RBP12□□□□□ -0.49
SMARCD2-208ENST00000580054 MMP14P50281 582 aa12□□□□□ -0.49
SMARCD2-208ENST00000580054 TAF1CQ15572 869 aaPredicted RBP12□□□□□ -0.49
SMARCD2-208ENST00000580054 CFAP100Q494V2 611 aa12□□□□□ -0.49
SMARCD2-208ENST00000580054 NBPF11Q86T75 865 aa12□□□□□ -0.49
SMARCD2-208ENST00000580054 CDAN1Q8IWY9 1227 aa12□□□□□ -0.49
SMARCD2-208ENST00000580054 ANKRD13AQ8IZ07 590 aa12□□□□□ -0.49
SMARCD2-208ENST00000580054 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 SNAP23O00161 211 aa11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 FAM43AQ8N2R8 423 aa11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 MTMR14Q8NCE2 650 aa11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 PRMT6Q96LA8 375 aaPredicted RBP11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 METTL22Q9BUU2 404 aaPredicted RBP11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 PRO3102Q9H379 93 aa11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 MBIPQ9NS73 344 aa11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 LEMD3Q9Y2U8 911 aa11.99□□□□□ -0.49
SMARCD2-208ENST00000580054 ALPK3Q96L96 1907 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 IRS2Q9Y4H2 1338 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 CCL15-CCL14A0A0B4J2E2 113 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 UNCXA6NJT0 531 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 ELL2O00472 640 aaPredicted RBP11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 IGKV5-2P06315 115 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 RASA3Q14644 834 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 MTFR1Q15390 333 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 CCL15Q16663 113 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 DPF3Q92784 378 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 ZFYVE28Q9HCC9 887 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 CD209Q9NNX6 404 aa11.98□□□□□ -0.49
SMARCD2-208ENST00000580054 SOX1O00570 391 aaPredicted RBP11.97□□□□□ -0.49
SMARCD2-208ENST00000580054 RALBP1Q15311 655 aa11.97□□□□□ -0.49
SMARCD2-208ENST00000580054 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.97□□□□□ -0.49
SMARCD2-208ENST00000580054 MAP3K2Q9Y2U5 619 aa11.97□□□□□ -0.49
SMARCD2-208ENST00000580054 MYO1BO43795 1136 aa11.96□□□□□ -0.49
SMARCD2-208ENST00000580054 IGHMBP2P38935 993 aaKnown RBP11.96□□□□□ -0.49
SMARCD2-208ENST00000580054 KCNJ4P48050 445 aa11.96□□□□□ -0.49
SMARCD2-208ENST00000580054 LACTBP83111 547 aaPredicted RBP11.96□□□□□ -0.49
SMARCD2-208ENST00000580054 VGLL4Q14135 290 aa11.96□□□□□ -0.49
SMARCD2-208ENST00000580054 ITGA6P23229 1130 aa11.95□□□□□ -0.5
SMARCD2-208ENST00000580054 CTGFP29279 349 aa11.95□□□□□ -0.5
SMARCD2-208ENST00000580054 CHRNDQ07001 517 aa11.95□□□□□ -0.5
SMARCD2-208ENST00000580054 ARHGEF6Q15052 776 aa11.95□□□□□ -0.5
SMARCD2-208ENST00000580054 CWF19L2Q2TBE0 894 aaKnown RBP11.95□□□□□ -0.5
SMARCD2-208ENST00000580054 UBE3BQ7Z3V4 1068 aa11.95□□□□□ -0.5
SMARCD2-208ENST00000580054 UBE2Q1Q7Z7E8 422 aa11.95□□□□□ -0.5
SMARCD2-208ENST00000580054 LRCH3Q96II8 777 aa11.95□□□□□ -0.5
SMARCD2-208ENST00000580054 ANKRD2Q9GZV1 360 aa11.95□□□□□ -0.5
SMARCD2-208ENST00000580054 MGAMO43451 1857 aa11.95□□□□□ -0.5
SMARCD2-208ENST00000580054 MYBBP1AQ9BQG0 1328 aaKnown RBP11.94□□□□□ -0.5
SMARCD2-208ENST00000580054 TAF5LO75529 589 aa11.94□□□□□ -0.5
SMARCD2-208ENST00000580054 GTF2A2P52657 109 aa11.94□□□□□ -0.5
SMARCD2-208ENST00000580054 RBM5P52756 815 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCD2-208ENST00000580054 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
SMARCD2-208ENST00000580054 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
SMARCD2-208ENST00000580054 TEPSINQ96N21 525 aa11.94□□□□□ -0.5
SMARCD2-208ENST00000580054 PI4KAP2A4QPH2 592 aa11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 NEURL1BA8MQ27 555 aa11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 TLR2O60603 784 aa11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 DDX58O95786 925 aaKnown RBP11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 WDR43Q15061 677 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 PI4KAP1Q8N8J0 262 aa11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 C8orf58Q8NAV2 365 aa11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 HELBQ8NG08 1087 aaPredicted RBP11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 MPHOSPH8Q99549 860 aa11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 TMEM39BQ9GZU3 492 aa11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 TDRD3Q9H7E2 651 aaKnown RBP11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 ZNF70Q9UC06 446 aaPredicted RBP11.93□□□□□ -0.5
SMARCD2-208ENST00000580054 TCP10L2B9ZVM9 353 aa11.92□□□□□ -0.5
SMARCD2-208ENST00000580054 BTBD19C9JJ37 291 aa11.92□□□□□ -0.5
SMARCD2-208ENST00000580054 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
SMARCD2-208ENST00000580054 IL1R1P14778 569 aa11.92□□□□□ -0.5
SMARCD2-208ENST00000580054 KIF22Q14807 665 aa11.92□□□□□ -0.5
SMARCD2-208ENST00000580054 SNCAIPQ9Y6H5 919 aa11.92□□□□□ -0.5
SMARCD2-208ENST00000580054 UNC80Q8N2C7 3258 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 H7C1W4 665 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 CCL5P13501 91 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms