RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 ZAP70P43403 619 aa20.32■□□□□ 0.84
SREBF1-218ENST00000578469 PRELPP51888 382 aa20.32■□□□□ 0.84
SREBF1-218ENST00000578469 UBE4AQ14139 1066 aa20.32■□□□□ 0.84
SREBF1-218ENST00000578469 MAP4K1Q92918 833 aa20.32■□□□□ 0.84
SREBF1-218ENST00000578469 ANKRD2Q9GZV1 360 aa20.32■□□□□ 0.84
SREBF1-218ENST00000578469 ARAP2Q8WZ64 1704 aa20.31■□□□□ 0.84
SREBF1-218ENST00000578469 HSP90AA1P07900 732 aaKnown RBP20.31■□□□□ 0.84
SREBF1-218ENST00000578469 ZKSCAN1P17029 563 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-218ENST00000578469 PHKA1P46020 1223 aa20.31■□□□□ 0.84
SREBF1-218ENST00000578469 NEK4P51957 841 aa20.31■□□□□ 0.84
SREBF1-218ENST00000578469 SCARF1Q14162 830 aa20.31■□□□□ 0.84
SREBF1-218ENST00000578469 ZMYM1Q5SVZ6 1142 aa20.31■□□□□ 0.84
SREBF1-218ENST00000578469 PRR5LQ6MZQ0 368 aa20.31■□□□□ 0.84
SREBF1-218ENST00000578469 CCDC24Q8N4L8 307 aa20.31■□□□□ 0.84
SREBF1-218ENST00000578469 CELF1Q92879 486 aaKnown RBP20.31■□□□□ 0.84
SREBF1-218ENST00000578469 BRIP1Q9BX63 1249 aa20.31■□□□□ 0.84
SREBF1-218ENST00000578469 RBM8AQ9Y5S9 174 aaKnown RBP20.31■□□□□ 0.84
SREBF1-218ENST00000578469 SNX14Q9Y5W7 946 aa20.31■□□□□ 0.84
SREBF1-218ENST00000578469 MCAMP43121 646 aa20.3■□□□□ 0.84
SREBF1-218ENST00000578469 KCNB2Q92953 911 aa20.3■□□□□ 0.84
SREBF1-218ENST00000578469 SLKQ9H2G2 1235 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-218ENST00000578469 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
SREBF1-218ENST00000578469 MINPP1Q9UNW1 487 aa20.3■□□□□ 0.84
SREBF1-218ENST00000578469 U3KPZ7 1027 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-218ENST00000578469 NECTIN1Q15223 517 aa20.29■□□□□ 0.84
SREBF1-218ENST00000578469 PRPF40BQ6NWY9 871 aaKnown RBP20.29■□□□□ 0.84
SREBF1-218ENST00000578469 TAOK3Q9H2K8 898 aa20.29■□□□□ 0.84
SREBF1-218ENST00000578469 GNL3LQ9NVN8 582 aaKnown RBP20.29■□□□□ 0.84
SREBF1-218ENST00000578469 HMG20BQ9P0W2 317 aa20.29■□□□□ 0.84
SREBF1-218ENST00000578469 DICER1Q9UPY3 1922 aaKnown RBP20.29■□□□□ 0.84
SREBF1-218ENST00000578469 C21orf2O43822 256 aa20.28■□□□□ 0.84
SREBF1-218ENST00000578469 CD2BP2O95400 341 aaKnown RBP20.28■□□□□ 0.84
SREBF1-218ENST00000578469 SOGA3Q5TF21 947 aa20.28■□□□□ 0.84
SREBF1-218ENST00000578469 ZNF589Q86UQ0 364 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-218ENST00000578469 SPRYD3Q8NCJ5 442 aa20.28■□□□□ 0.84
SREBF1-218ENST00000578469 RPGRQ92834 1020 aaKnown RBP20.28■□□□□ 0.84
SREBF1-218ENST00000578469 ZNF219Q9P2Y4 722 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-218ENST00000578469 ANKRD31Q8N7Z5 1873 aa20.28■□□□□ 0.84
SREBF1-218ENST00000578469 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.84
SREBF1-218ENST00000578469 COL11A2P13942 1736 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-218ENST00000578469 FER1L6Q2WGJ9 1857 aa20.27■□□□□ 0.84
SREBF1-218ENST00000578469 GRAPQ13588 217 aa20.27■□□□□ 0.84
SREBF1-218ENST00000578469 CAVIN4Q5BKX8 364 aa20.27■□□□□ 0.84
SREBF1-218ENST00000578469 CREB3L3Q68CJ9 461 aa20.27■□□□□ 0.84
SREBF1-218ENST00000578469 SPATA5Q8NB90 893 aa20.27■□□□□ 0.84
SREBF1-218ENST00000578469 GRAPLQ8TC17 118 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-218ENST00000578469 CNKSR1Q969H4 720 aa20.27■□□□□ 0.84
SREBF1-218ENST00000578469 ANP32EQ9BTT0 268 aa20.27■□□□□ 0.84
SREBF1-218ENST00000578469 TM6SF1Q9BZW5 370 aa20.27■□□□□ 0.84
SREBF1-218ENST00000578469 PSMA5P28066 241 aa20.26■□□□□ 0.83
SREBF1-218ENST00000578469 WASHC4Q2M389 1173 aa20.26■□□□□ 0.83
SREBF1-218ENST00000578469 CHADLQ6NUI6 762 aa20.26■□□□□ 0.83
SREBF1-218ENST00000578469 RASEFQ8IZ41 740 aa20.26■□□□□ 0.83
SREBF1-218ENST00000578469 APPBP2Q92624 585 aa20.26■□□□□ 0.83
SREBF1-218ENST00000578469 RBM17Q96I25 401 aaKnown RBP20.26■□□□□ 0.83
SREBF1-218ENST00000578469 SEC62Q99442 399 aaKnown RBP20.26■□□□□ 0.83
SREBF1-218ENST00000578469 CREBZFQ9NS37 354 aa20.26■□□□□ 0.83
SREBF1-218ENST00000578469 CHMP5Q9NZZ3 219 aa20.26■□□□□ 0.83
SREBF1-218ENST00000578469 POTECB2RU33 542 aa20.25■□□□□ 0.83
SREBF1-218ENST00000578469 SNAP23O00161 211 aa20.25■□□□□ 0.83
SREBF1-218ENST00000578469 SLC27A2O14975 620 aa20.25■□□□□ 0.83
SREBF1-218ENST00000578469 CYP2E1P05181 493 aaPredicted RBP20.25■□□□□ 0.83
SREBF1-218ENST00000578469 KRT32Q14532 448 aa20.25■□□□□ 0.83
SREBF1-218ENST00000578469 PI16Q6UXB8 463 aa20.25■□□□□ 0.83
SREBF1-218ENST00000578469 CCDC129Q6ZRS4 1044 aa20.25■□□□□ 0.83
SREBF1-218ENST00000578469 DSCC1Q9BVC3 393 aa20.25■□□□□ 0.83
SREBF1-218ENST00000578469 BCAMP50895 628 aa20.24■□□□□ 0.83
SREBF1-218ENST00000578469 VPS37DQ86XT2 251 aa20.24■□□□□ 0.83
SREBF1-218ENST00000578469 UPF3BQ9BZI7 483 aaKnown RBP20.24■□□□□ 0.83
SREBF1-218ENST00000578469 CIZ1Q9ULV3 898 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-218ENST00000578469 MAST3O60307 1309 aa20.24■□□□□ 0.83
SREBF1-218ENST00000578469 COL4A1P02462 1669 aa20.23■□□□□ 0.83
SREBF1-218ENST00000578469 IQCA1LA6NCM1 817 aa20.23■□□□□ 0.83
SREBF1-218ENST00000578469 IDH1O75874 414 aaKnown RBP20.23■□□□□ 0.83
SREBF1-218ENST00000578469 ADD2P35612 726 aa20.23■□□□□ 0.83
SREBF1-218ENST00000578469 MAP3K12Q12852 859 aa20.23■□□□□ 0.83
SREBF1-218ENST00000578469 RASGRF1Q13972 1273 aa20.23■□□□□ 0.83
SREBF1-218ENST00000578469 UBE3CQ15386 1083 aa20.23■□□□□ 0.83
SREBF1-218ENST00000578469 CRY2Q49AN0 593 aa20.23■□□□□ 0.83
SREBF1-218ENST00000578469 STYK1Q6J9G0 422 aa20.23■□□□□ 0.83
SREBF1-218ENST00000578469 JAKMIP1Q96N16 626 aaKnown RBP20.23■□□□□ 0.83
SREBF1-218ENST00000578469 PIH1D3Q9NQM4 214 aaKnown RBP20.23■□□□□ 0.83
SREBF1-218ENST00000578469 CYP46A1Q9Y6A2 500 aa20.23■□□□□ 0.83
SREBF1-218ENST00000578469 AKAP11Q9UKA4 1901 aa20.22■□□□□ 0.83
SREBF1-218ENST00000578469 CHGBP05060 677 aa20.22■□□□□ 0.83
SREBF1-218ENST00000578469 TSGA10IPQ3SY00 556 aa20.22■□□□□ 0.83
SREBF1-218ENST00000578469 SLC9C2Q5TAH2 1124 aa20.22■□□□□ 0.83
SREBF1-218ENST00000578469 OSBP2Q969R2 916 aa20.22■□□□□ 0.83
SREBF1-218ENST00000578469 ZSWIM6Q9HCJ5 1215 aa20.22■□□□□ 0.83
SREBF1-218ENST00000578469 ZNF804BA4D1E1 1349 aa20.22■□□□□ 0.83
SREBF1-218ENST00000578469 A0A1B0GUL6 1792 aa20.21■□□□□ 0.83
SREBF1-218ENST00000578469 M0R2C6 588 aa20.21■□□□□ 0.83
SREBF1-218ENST00000578469 SEMA3EO15041 775 aa20.21■□□□□ 0.83
SREBF1-218ENST00000578469 CASTP20810 708 aaKnown RBP20.21■□□□□ 0.83
SREBF1-218ENST00000578469 MASTLQ96GX5 879 aa20.21■□□□□ 0.83
SREBF1-218ENST00000578469 MKRN1Q9UHC7 482 aaKnown RBP20.21■□□□□ 0.83
SREBF1-218ENST00000578469 CTNNA3Q9UI47 895 aa20.21■□□□□ 0.83
SREBF1-218ENST00000578469 DENND2AQ9ULE3 1009 aa20.21■□□□□ 0.83
SREBF1-218ENST00000578469 LEMD3Q9Y2U8 911 aa20.21■□□□□ 0.83
SREBF1-218ENST00000578469 CACNA1SQ13698 1873 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms