RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 GTF2IP78347 998 aa18.3■□□□□ 0.52
PPP4R1-206ENST00000577779 TAF1CQ15572 869 aaPredicted RBP18.3■□□□□ 0.52
PPP4R1-206ENST00000577779 CCDC191Q8NCU4 936 aa18.3■□□□□ 0.52
PPP4R1-206ENST00000577779 ZFYVE28Q9HCC9 887 aa18.3■□□□□ 0.52
PPP4R1-206ENST00000577779 ECM29Q5VYK3 1845 aa18.3■□□□□ 0.52
PPP4R1-206ENST00000577779 ZNF804BA4D1E1 1349 aa18.29■□□□□ 0.52
PPP4R1-206ENST00000577779 USP2O75604 605 aaPredicted RBP18.29■□□□□ 0.52
PPP4R1-206ENST00000577779 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
PPP4R1-206ENST00000577779 NBPF12Q5TAG4 269 aaPredicted RBP18.29■□□□□ 0.52
PPP4R1-206ENST00000577779 OPTNQ96CV9 577 aa18.29■□□□□ 0.52
PPP4R1-206ENST00000577779 ELP3Q9H9T3 547 aa18.29■□□□□ 0.52
PPP4R1-206ENST00000577779 CWC25Q9NXE8 425 aaPredicted RBP18.29■□□□□ 0.52
PPP4R1-206ENST00000577779 CLRN2A0PK11 232 aa18.28■□□□□ 0.52
PPP4R1-206ENST00000577779 MYO1BO43795 1136 aa18.28■□□□□ 0.52
PPP4R1-206ENST00000577779 CTSWP56202 376 aa18.28■□□□□ 0.52
PPP4R1-206ENST00000577779 MS4A4AQ96JQ5 239 aa18.28■□□□□ 0.52
PPP4R1-206ENST00000577779 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
PPP4R1-206ENST00000577779 LEMD3Q9Y2U8 911 aa18.28■□□□□ 0.52
PPP4R1-206ENST00000577779 MNX1P50219 401 aaPredicted RBP18.27■□□□□ 0.52
PPP4R1-206ENST00000577779 KIF22Q14807 665 aa18.27■□□□□ 0.52
PPP4R1-206ENST00000577779 MTMR14Q8NCE2 650 aa18.27■□□□□ 0.52
PPP4R1-206ENST00000577779 BRI3BPQ8WY22 251 aa18.27■□□□□ 0.52
PPP4R1-206ENST00000577779 SHISA4Q96DD7 197 aa18.27■□□□□ 0.52
PPP4R1-206ENST00000577779 PRO3102Q9H379 93 aa18.27■□□□□ 0.52
PPP4R1-206ENST00000577779 PCDHAC2Q9Y5I4 1007 aa18.27■□□□□ 0.52
PPP4R1-206ENST00000577779 OTOFQ9HC10 1997 aa18.27■□□□□ 0.52
PPP4R1-206ENST00000577779 CCL15-CCL14A0A0B4J2E2 113 aa18.26■□□□□ 0.51
PPP4R1-206ENST00000577779 KLRK1P26718 216 aa18.26■□□□□ 0.51
PPP4R1-206ENST00000577779 NEUROD2Q15784 382 aa18.26■□□□□ 0.51
PPP4R1-206ENST00000577779 CCL15Q16663 113 aa18.26■□□□□ 0.51
PPP4R1-206ENST00000577779 HTATIP2Q9BUP3 242 aa18.26■□□□□ 0.51
PPP4R1-206ENST00000577779 GREM2Q9H772 168 aa18.26■□□□□ 0.51
PPP4R1-206ENST00000577779 WDHD1O75717 1129 aaPredicted RBP18.25■□□□□ 0.51
PPP4R1-206ENST00000577779 DUSP27Q5VZP5 1158 aa18.25■□□□□ 0.51
PPP4R1-206ENST00000577779 ARHGAP39Q9C0H5 1083 aa18.25■□□□□ 0.51
PPP4R1-206ENST00000577779 PHAXQ9H814 394 aaKnown RBP18.25■□□□□ 0.51
PPP4R1-206ENST00000577779 NR2E3Q9Y5X4 410 aa18.25■□□□□ 0.51
PPP4R1-206ENST00000577779 ZSWIM8A7E2V4 1837 aa18.25■□□□□ 0.51
PPP4R1-206ENST00000577779 MYH3P11055 1940 aa18.24■□□□□ 0.51
PPP4R1-206ENST00000577779 SPDYE2BA6NHP3 402 aa18.24■□□□□ 0.51
PPP4R1-206ENST00000577779 SPDYE6P0CI01 402 aa18.24■□□□□ 0.51
PPP4R1-206ENST00000577779 GTF2A2P52657 109 aa18.24■□□□□ 0.51
PPP4R1-206ENST00000577779 RASA3Q14644 834 aa18.24■□□□□ 0.51
PPP4R1-206ENST00000577779 CFAP100Q494V2 611 aa18.24■□□□□ 0.51
PPP4R1-206ENST00000577779 FAM43AQ8N2R8 423 aa18.24■□□□□ 0.51
PPP4R1-206ENST00000577779 CERS5Q8N5B7 392 aa18.24■□□□□ 0.51
PPP4R1-206ENST00000577779 TTLL11Q8NHH1 800 aa18.24■□□□□ 0.51
PPP4R1-206ENST00000577779 F8W031 263 aaPredicted RBP18.23■□□□□ 0.51
PPP4R1-206ENST00000577779 GNRH1P01148 92 aa18.23■□□□□ 0.51
PPP4R1-206ENST00000577779 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
PPP4R1-206ENST00000577779 LACTBP83111 547 aaPredicted RBP18.23■□□□□ 0.51
PPP4R1-206ENST00000577779 MTFR1Q15390 333 aa18.23■□□□□ 0.51
PPP4R1-206ENST00000577779 NKX2-3Q8TAU0 364 aa18.23■□□□□ 0.51
PPP4R1-206ENST00000577779 PRMT6Q96LA8 375 aaPredicted RBP18.23■□□□□ 0.51
PPP4R1-206ENST00000577779 ANKRD2Q9GZV1 360 aa18.23■□□□□ 0.51
PPP4R1-206ENST00000577779 A0A1W2PPC1 479 aa18.22■□□□□ 0.51
PPP4R1-206ENST00000577779 SOX1O00570 391 aaPredicted RBP18.22■□□□□ 0.51
PPP4R1-206ENST00000577779 IGHMBP2P38935 993 aaKnown RBP18.22■□□□□ 0.51
PPP4R1-206ENST00000577779 KCNJ4P48050 445 aa18.22■□□□□ 0.51
PPP4R1-206ENST00000577779 PRMT2P55345 433 aa18.22■□□□□ 0.51
PPP4R1-206ENST00000577779 CD209Q9NNX6 404 aa18.22■□□□□ 0.51
PPP4R1-206ENST00000577779 AOX1Q06278 1338 aa18.22■□□□□ 0.51
PPP4R1-206ENST00000577779 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
PPP4R1-206ENST00000577779 TLR2O60603 784 aa18.21■□□□□ 0.51
PPP4R1-206ENST00000577779 RBM5P52756 815 aaKnown RBP eCLIP18.21■□□□□ 0.51
PPP4R1-206ENST00000577779 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.21■□□□□ 0.51
PPP4R1-206ENST00000577779 LRCH3Q96II8 777 aa18.21■□□□□ 0.51
PPP4R1-206ENST00000577779 METTL22Q9BUU2 404 aaPredicted RBP18.21■□□□□ 0.51
PPP4R1-206ENST00000577779 UBE2Q1Q7Z7E8 422 aa18.2■□□□□ 0.5
PPP4R1-206ENST00000577779 ECM2O94769 699 aaPredicted RBP18.19■□□□□ 0.5
PPP4R1-206ENST00000577779 GJA8P48165 433 aa18.19■□□□□ 0.5
PPP4R1-206ENST00000577779 TNFAIP1Q13829 316 aa18.19■□□□□ 0.5
PPP4R1-206ENST00000577779 VGLL4Q14135 290 aa18.19■□□□□ 0.5
PPP4R1-206ENST00000577779 TRIM35Q9UPQ4 493 aa18.19■□□□□ 0.5
PPP4R1-206ENST00000577779 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
PPP4R1-206ENST00000577779 GJB1P08034 283 aa18.18■□□□□ 0.5
PPP4R1-206ENST00000577779 MAP3K9P80192 1104 aa18.18■□□□□ 0.5
PPP4R1-206ENST00000577779 MPHOSPH8Q99549 860 aa18.18■□□□□ 0.5
PPP4R1-206ENST00000577779 CSADQ9Y600 493 aa18.18■□□□□ 0.5
PPP4R1-206ENST00000577779 VCANP13611 3396 aa18.17■□□□□ 0.5
PPP4R1-206ENST00000577779 CETPP11597 493 aa18.17■□□□□ 0.5
PPP4R1-206ENST00000577779 CCL5P13501 91 aa18.17■□□□□ 0.5
PPP4R1-206ENST00000577779 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
PPP4R1-206ENST00000577779 RAET1EQ8TD07 263 aa18.17■□□□□ 0.5
PPP4R1-206ENST00000577779 MAP3K2Q9Y2U5 619 aa18.17■□□□□ 0.5
PPP4R1-206ENST00000577779 LAMA2P24043 3122 aaKnown RBP18.16■□□□□ 0.5
PPP4R1-206ENST00000577779 GRK4P32298 578 aa18.16■□□□□ 0.5
PPP4R1-206ENST00000577779 CDAN1Q8IWY9 1227 aa18.16■□□□□ 0.5
PPP4R1-206ENST00000577779 RNF208Q9H0X6 261 aa18.16■□□□□ 0.5
PPP4R1-206ENST00000577779 ZCCHC17Q9NP64 241 aaKnown RBP18.16■□□□□ 0.5
PPP4R1-206ENST00000577779 BIN2Q9UBW5 565 aaPredicted RBP18.16■□□□□ 0.5
PPP4R1-206ENST00000577779 ZNF70Q9UC06 446 aaPredicted RBP18.16■□□□□ 0.5
PPP4R1-206ENST00000577779 SRRDQ9UH36 339 aa18.16■□□□□ 0.5
PPP4R1-206ENST00000577779 RIPOR2Q9Y4F9 1068 aa18.16■□□□□ 0.5
PPP4R1-206ENST00000577779 BTBD19C9JJ37 291 aa18.15■□□□□ 0.5
PPP4R1-206ENST00000577779 EVI5O60447 810 aa18.15■□□□□ 0.5
PPP4R1-206ENST00000577779 FARP2O94887 1054 aaPredicted RBP18.15■□□□□ 0.5
PPP4R1-206ENST00000577779 IGKV5-2P06315 115 aa18.15■□□□□ 0.5
PPP4R1-206ENST00000577779 ITGA6P23229 1130 aa18.15■□□□□ 0.5
PPP4R1-206ENST00000577779 PSMC4P43686 418 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms