RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 GPSM3Q9Y4H4 160 aa8.28□□□□□ -1.08
NUP88-212ENST00000576708 PCDHB9Q9Y5E1 797 aa8.28□□□□□ -1.08
NUP88-212ENST00000576708 NFKBIEO00221 500 aa8.27□□□□□ -1.09
NUP88-212ENST00000576708 LCE2BO14633 110 aa8.27□□□□□ -1.09
NUP88-212ENST00000576708 HTRA3P83110 453 aa8.27□□□□□ -1.09
NUP88-212ENST00000576708 ERFEQ4G0M1 354 aa8.27□□□□□ -1.09
NUP88-212ENST00000576708 NBPF10Q6P3W6 841 aaKnown RBP8.27□□□□□ -1.09
NUP88-212ENST00000576708 DZIP3Q86Y13 1208 aaKnown RBP8.27□□□□□ -1.09
NUP88-212ENST00000576708 NBPF15Q8N660 670 aa8.27□□□□□ -1.09
NUP88-212ENST00000576708 RTF1Q92541 710 aaKnown RBP8.27□□□□□ -1.09
NUP88-212ENST00000576708 MRGPRX2Q96LB1 330 aa8.27□□□□□ -1.09
NUP88-212ENST00000576708 ANKRD31Q8N7Z5 1873 aa8.27□□□□□ -1.09
NUP88-212ENST00000576708 SCN7AQ01118 1682 aa8.27□□□□□ -1.09
NUP88-212ENST00000576708 CEP350Q5VT06 3117 aa8.27□□□□□ -1.09
NUP88-212ENST00000576708 TNFRSF10AO00220 468 aa8.26□□□□□ -1.09
NUP88-212ENST00000576708 WNT7AO00755 349 aa8.26□□□□□ -1.09
NUP88-212ENST00000576708 C21orf2O43822 256 aa8.26□□□□□ -1.09
NUP88-212ENST00000576708 SNRPA1P09661 255 aaKnown RBP8.26□□□□□ -1.09
NUP88-212ENST00000576708 Q6ZNB5 142 aa8.26□□□□□ -1.09
NUP88-212ENST00000576708 SETDB2Q96T68 719 aa8.26□□□□□ -1.09
NUP88-212ENST00000576708 THUMPD2Q9BTF0 503 aaKnown RBP8.26□□□□□ -1.09
NUP88-212ENST00000576708 BRIP1Q9BX63 1249 aa8.26□□□□□ -1.09
NUP88-212ENST00000576708 COL11A2P13942 1736 aaPredicted RBP8.26□□□□□ -1.09
NUP88-212ENST00000576708 SBF1O95248 1867 aa8.26□□□□□ -1.09
NUP88-212ENST00000576708 DLEC1Q9Y238 1755 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 LMNB1P20700 586 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 VARSP26640 1264 aaKnown RBP8.25□□□□□ -1.09
NUP88-212ENST00000576708 ARID5BQ14865 1188 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 TAF7Q15545 349 aaPredicted RBP8.25□□□□□ -1.09
NUP88-212ENST00000576708 NPM2Q86SE8 214 aaKnown RBP8.25□□□□□ -1.09
NUP88-212ENST00000576708 C16orf71Q8IYS4 520 aaPredicted RBP8.25□□□□□ -1.09
NUP88-212ENST00000576708 NGEFQ8N5V2 710 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 CNBD1Q8NA66 436 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 FAM174AQ8TBP5 190 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 ADAMTS19Q8TE59 1207 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 PKD2L1Q9P0L9 805 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 TLL2Q9Y6L7 1015 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 KDM2BQ8NHM5 1336 aa8.25□□□□□ -1.09
NUP88-212ENST00000576708 NPHP1O15259 732 aa8.24□□□□□ -1.09
NUP88-212ENST00000576708 PDE6BP35913 854 aa8.24□□□□□ -1.09
NUP88-212ENST00000576708 HLFQ16534 295 aa8.24□□□□□ -1.09
NUP88-212ENST00000576708 DNAJC5GQ8N7S2 189 aa8.24□□□□□ -1.09
NUP88-212ENST00000576708 PLEKHF1Q96S99 279 aa8.24□□□□□ -1.09
NUP88-212ENST00000576708 C1QTNF2Q9BXJ5 285 aa8.24□□□□□ -1.09
NUP88-212ENST00000576708 BCORQ6W2J9 1755 aa8.23□□□□□ -1.09
NUP88-212ENST00000576708 GLTPD2A6NH11 291 aa8.23□□□□□ -1.09
NUP88-212ENST00000576708 HTATSF1O43719 755 aaKnown RBP8.23□□□□□ -1.09
NUP88-212ENST00000576708 SRGNP10124 158 aa8.23□□□□□ -1.09
NUP88-212ENST00000576708 ST5P78524 1137 aa8.23□□□□□ -1.09
NUP88-212ENST00000576708 SEMA3FQ13275 785 aa8.23□□□□□ -1.09
NUP88-212ENST00000576708 NFE2L2Q16236 605 aa8.23□□□□□ -1.09
NUP88-212ENST00000576708 HDGFL1Q5TGJ6 251 aa8.23□□□□□ -1.09
NUP88-212ENST00000576708 OLFM4Q6UX06 510 aa8.23□□□□□ -1.09
NUP88-212ENST00000576708 TRIM67Q6ZTA4 783 aa8.23□□□□□ -1.09
NUP88-212ENST00000576708 NBPF5PQ86XG9 351 aaPredicted RBP8.23□□□□□ -1.09
NUP88-212ENST00000576708 SLC10A4Q96EP9 437 aa8.23□□□□□ -1.09
NUP88-212ENST00000576708 NIP7Q9Y221 180 aaKnown RBP eCLIP8.23□□□□□ -1.09
NUP88-212ENST00000576708 POTECB2RU33 542 aa8.22□□□□□ -1.09
NUP88-212ENST00000576708 GDF9O60383 454 aa8.22□□□□□ -1.09
NUP88-212ENST00000576708 STYK1Q6J9G0 422 aa8.22□□□□□ -1.09
NUP88-212ENST00000576708 PRPF40BQ6NWY9 871 aaKnown RBP8.22□□□□□ -1.09
NUP88-212ENST00000576708 GLMNQ92990 594 aa8.22□□□□□ -1.09
NUP88-212ENST00000576708 RRP7AQ9Y3A4 280 aaKnown RBP8.22□□□□□ -1.09
NUP88-212ENST00000576708 SLX4Q8IY92 1834 aa8.22□□□□□ -1.09
NUP88-212ENST00000576708 CCDC88AQ3V6T2 1871 aa8.21□□□□□ -1.09
NUP88-212ENST00000576708 DLG5Q8TDM6 1919 aa8.21□□□□□ -1.09
NUP88-212ENST00000576708 TIAM2Q8IVF5 1701 aa8.21□□□□□ -1.09
NUP88-212ENST00000576708 SIAH2O43255 324 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 MYL6BP14649 208 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 VEGFAP15692 232 aaPredicted RBP8.21□□□□□ -1.1
NUP88-212ENST00000576708 RAB15P59190 212 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 EIF4A1P60842 406 aaKnown RBP8.21□□□□□ -1.1
NUP88-212ENST00000576708 FSTL1Q12841 308 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 CLEC4GQ6UXB4 293 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 TTLL7Q6ZT98 887 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 SLC51AQ86UW1 340 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 CNKSR1Q969H4 720 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 MASTLQ96GX5 879 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 CALR3Q96L12 384 aaKnown RBP8.21□□□□□ -1.1
NUP88-212ENST00000576708 ALG2Q9H553 416 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 C1orf115Q9H7X2 142 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 PDZRN3Q9UPQ7 1066 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 ZNF652Q9Y2D9 606 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 CACNA1SQ13698 1873 aa8.21□□□□□ -1.1
NUP88-212ENST00000576708 TNRC6CQ9HCJ0 1690 aaKnown RBP8.21□□□□□ -1.1
NUP88-212ENST00000576708 DDNO94850 711 aaPredicted RBP8.2□□□□□ -1.1
NUP88-212ENST00000576708 ALDH1A1P00352 501 aa8.2□□□□□ -1.1
NUP88-212ENST00000576708 NEFMP07197 916 aa8.2□□□□□ -1.1
NUP88-212ENST00000576708 GPTP24298 496 aa8.2□□□□□ -1.1
NUP88-212ENST00000576708 TPTE2Q6XPS3 522 aa8.2□□□□□ -1.1
NUP88-212ENST00000576708 VASH1Q7L8A9 365 aaPredicted RBP8.2□□□□□ -1.1
NUP88-212ENST00000576708 TRMT44Q8IYL2 757 aaKnown RBP8.2□□□□□ -1.1
NUP88-212ENST00000576708 SMC1BQ8NDV3 1235 aa8.2□□□□□ -1.1
NUP88-212ENST00000576708 C7orf43Q8WVR3 580 aa8.2□□□□□ -1.1
NUP88-212ENST00000576708 TAOK3Q9H2K8 898 aa8.2□□□□□ -1.1
NUP88-212ENST00000576708 MAPK8IP3Q9UPT6 1336 aa8.2□□□□□ -1.1
NUP88-212ENST00000576708 WDR90Q96KV7 1748 aa8.2□□□□□ -1.1
NUP88-212ENST00000576708 KDM3BQ7LBC6 1761 aa8.2□□□□□ -1.1
NUP88-212ENST00000576708 FER1L6Q2WGJ9 1857 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms