RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 FRMD6Q96NE9 622 aa8.58□□□□□ -1.04
CDC27-219ENST00000576484 ITPKAP23677 461 aa8.57□□□□□ -1.04
CDC27-219ENST00000576484 FCGRTP55899 365 aa8.57□□□□□ -1.04
CDC27-219ENST00000576484 RAC1P63000 192 aa8.57□□□□□ -1.04
CDC27-219ENST00000576484 GRIK4Q16099 956 aa8.57□□□□□ -1.04
CDC27-219ENST00000576484 TXNDC11Q6PKC3 985 aa8.57□□□□□ -1.04
CDC27-219ENST00000576484 VN1R5Q7Z5H4 357 aa8.57□□□□□ -1.04
CDC27-219ENST00000576484 ALYREFQ86V81 257 aaKnown RBP8.57□□□□□ -1.04
CDC27-219ENST00000576484 ZNF428Q96B54 188 aa8.57□□□□□ -1.04
CDC27-219ENST00000576484 AK5Q9Y6K8 562 aa8.57□□□□□ -1.04
CDC27-219ENST00000576484 A0A0A0MRY4 1105 aa8.56□□□□□ -1.04
CDC27-219ENST00000576484 GIPC1O14908 333 aa8.56□□□□□ -1.04
CDC27-219ENST00000576484 APBA3O96018 575 aa8.56□□□□□ -1.04
CDC27-219ENST00000576484 SPATA31C1P0DKV0 1188 aa8.56□□□□□ -1.04
CDC27-219ENST00000576484 EIF4BP23588 611 aaKnown RBP8.56□□□□□ -1.04
CDC27-219ENST00000576484 CDC25BP30305 580 aa8.56□□□□□ -1.04
CDC27-219ENST00000576484 CACTIN-AS1Q8N1I8 211 aa8.56□□□□□ -1.04
CDC27-219ENST00000576484 C3orf58Q8NDZ4 430 aa8.56□□□□□ -1.04
CDC27-219ENST00000576484 SRCIN1Q9C0H9 1055 aa8.56□□□□□ -1.04
CDC27-219ENST00000576484 ZNF576Q9H609 170 aa8.56□□□□□ -1.04
CDC27-219ENST00000576484 UNCXA6NJT0 531 aa8.55□□□□□ -1.04
CDC27-219ENST00000576484 C1QTNF9BB2RNN3 333 aa8.55□□□□□ -1.04
CDC27-219ENST00000576484 USP17L7P0C7H9 530 aa8.55□□□□□ -1.04
CDC27-219ENST00000576484 FAM8A1Q9UBU6 413 aa8.55□□□□□ -1.04
CDC27-219ENST00000576484 PPME1Q9Y570 386 aa8.55□□□□□ -1.04
CDC27-219ENST00000576484 FAM177BA6PVY3 158 aa8.54□□□□□ -1.04
CDC27-219ENST00000576484 H3BRJ5 948 aa8.54□□□□□ -1.04
CDC27-219ENST00000576484 LINC01387J3KSC0 135 aa8.54□□□□□ -1.04
CDC27-219ENST00000576484 SORBS3O60504 671 aa8.54□□□□□ -1.04
CDC27-219ENST00000576484 CHRNA4P43681 627 aa8.54□□□□□ -1.04
CDC27-219ENST00000576484 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
CDC27-219ENST00000576484 DTHD1Q6ZMT9 781 aa8.54□□□□□ -1.04
CDC27-219ENST00000576484 CD163Q86VB7 1156 aa8.54□□□□□ -1.04
CDC27-219ENST00000576484 MRS2Q9HD23 443 aa8.54□□□□□ -1.04
CDC27-219ENST00000576484 MSTNO14793 375 aa8.53□□□□□ -1.04
CDC27-219ENST00000576484 ITGB2P05107 769 aa8.53□□□□□ -1.04
CDC27-219ENST00000576484 GSTT1P30711 240 aa8.53□□□□□ -1.04
CDC27-219ENST00000576484 PTPN12Q05209 780 aaKnown RBP8.53□□□□□ -1.04
CDC27-219ENST00000576484 CLEC4MQ9H2X3 399 aaPredicted RBP8.53□□□□□ -1.04
CDC27-219ENST00000576484 VTI1BQ9UEU0 232 aa8.53□□□□□ -1.04
CDC27-219ENST00000576484 DEAF1O75398 565 aaPredicted RBP8.52□□□□□ -1.05
CDC27-219ENST00000576484 CTSHP09668 335 aa8.52□□□□□ -1.05
CDC27-219ENST00000576484 CABP4P57796 275 aa8.52□□□□□ -1.05
CDC27-219ENST00000576484 PCDH1Q08174 1060 aa8.52□□□□□ -1.05
CDC27-219ENST00000576484 HGSNATQ68CP4 663 aa8.52□□□□□ -1.05
CDC27-219ENST00000576484 SHISA2Q6UWI4 295 aa8.52□□□□□ -1.05
CDC27-219ENST00000576484 SPOCK3Q9BQ16 436 aa8.52□□□□□ -1.05
CDC27-219ENST00000576484 CARD10Q9BWT7 1032 aa8.52□□□□□ -1.05
CDC27-219ENST00000576484 PPP4R2Q9NY27 417 aa8.52□□□□□ -1.05
CDC27-219ENST00000576484 ESRRAP11474 423 aaPredicted RBP8.51□□□□□ -1.05
CDC27-219ENST00000576484 XRCC5P13010 732 aaKnown RBP8.51□□□□□ -1.05
CDC27-219ENST00000576484 FAAP100Q0VG06 881 aa8.51□□□□□ -1.05
CDC27-219ENST00000576484 IKBKEQ14164 716 aa8.51□□□□□ -1.05
CDC27-219ENST00000576484 SETDB1Q15047 1291 aa8.51□□□□□ -1.05
CDC27-219ENST00000576484 ZNF423Q2M1K9 1284 aa8.51□□□□□ -1.05
CDC27-219ENST00000576484 FMR1NBQ8N0W7 255 aaPredicted RBP8.51□□□□□ -1.05
CDC27-219ENST00000576484 AKAP2Q9Y2D5 859 aa8.51□□□□□ -1.05
CDC27-219ENST00000576484 SOX1O00570 391 aaPredicted RBP8.5□□□□□ -1.05
CDC27-219ENST00000576484 TM4SF5O14894 197 aa8.5□□□□□ -1.05
CDC27-219ENST00000576484 FSCN2O14926 492 aa8.5□□□□□ -1.05
CDC27-219ENST00000576484 DTWD1Q8N5C7 304 aa8.5□□□□□ -1.05
CDC27-219ENST00000576484 SLC7A3Q8WY07 619 aa8.5□□□□□ -1.05
CDC27-219ENST00000576484 MRRFQ96E11 262 aaKnown RBP8.5□□□□□ -1.05
CDC27-219ENST00000576484 CRELD1Q96HD1 420 aa8.5□□□□□ -1.05
CDC27-219ENST00000576484 KIAA1522Q9P206 1035 aaPredicted RBP8.5□□□□□ -1.05
CDC27-219ENST00000576484 USP21Q9UK80 565 aa8.5□□□□□ -1.05
CDC27-219ENST00000576484 FBXO24O75426 580 aa8.49□□□□□ -1.05
CDC27-219ENST00000576484 B3GALT4O96024 378 aa8.49□□□□□ -1.05
CDC27-219ENST00000576484 IGHA1P01876 353 aa8.49□□□□□ -1.05
CDC27-219ENST00000576484 ELNP15502 786 aa8.49□□□□□ -1.05
CDC27-219ENST00000576484 RBM25P49756 843 aaKnown RBP8.49□□□□□ -1.05
CDC27-219ENST00000576484 PIP4K2BP78356 416 aa8.49□□□□□ -1.05
CDC27-219ENST00000576484 RPS26P11Q5JNZ5 115 aaPredicted RBP8.49□□□□□ -1.05
CDC27-219ENST00000576484 MEI1Q5TIA1 1274 aa8.49□□□□□ -1.05
CDC27-219ENST00000576484 FAM117BQ6P1L5 589 aa8.49□□□□□ -1.05
CDC27-219ENST00000576484 GALNT11Q8NCW6 608 aa8.49□□□□□ -1.05
CDC27-219ENST00000576484 NACC1Q96RE7 527 aa8.49□□□□□ -1.05
CDC27-219ENST00000576484 FBXO11Q86XK2 927 aa8.48□□□□□ -1.05
CDC27-219ENST00000576484 SRA1Q9HD15 236 aaKnown RBP8.48□□□□□ -1.05
CDC27-219ENST00000576484 SEC31BQ9NQW1 1179 aa8.48□□□□□ -1.05
CDC27-219ENST00000576484 PPM1HQ9ULR3 514 aa8.48□□□□□ -1.05
CDC27-219ENST00000576484 RECKO95980 971 aa8.47□□□□□ -1.05
CDC27-219ENST00000576484 SELPP16109 830 aa8.47□□□□□ -1.05
CDC27-219ENST00000576484 GATA4P43694 442 aa8.47□□□□□ -1.05
CDC27-219ENST00000576484 ZNF157P51786 506 aaPredicted RBP8.47□□□□□ -1.05
CDC27-219ENST00000576484 FOXD4L6Q3SYB3 417 aaPredicted RBP8.47□□□□□ -1.05
CDC27-219ENST00000576484 LDLRAD1Q5T700 205 aa8.47□□□□□ -1.05
CDC27-219ENST00000576484 FOXD4L3Q6VB84 417 aaPredicted RBP8.47□□□□□ -1.05
CDC27-219ENST00000576484 TPTE2Q6XPS3 522 aa8.47□□□□□ -1.05
CDC27-219ENST00000576484 MAP4K3Q8IVH8 894 aa8.47□□□□□ -1.05
CDC27-219ENST00000576484 WNT8BQ93098 351 aa8.47□□□□□ -1.05
CDC27-219ENST00000576484 KLHDC7BQ96G42 594 aa8.47□□□□□ -1.05
CDC27-219ENST00000576484 BCL11AQ9H165 835 aa8.47□□□□□ -1.05
CDC27-219ENST00000576484 ZFYVE1Q9HBF4 777 aa8.47□□□□□ -1.05
CDC27-219ENST00000576484 GPN3Q9UHW5 284 aaPredicted RBP8.47□□□□□ -1.05
CDC27-219ENST00000576484 TTF2Q9UNY4 1162 aaKnown RBP8.47□□□□□ -1.05
CDC27-219ENST00000576484 C9orf172C9J069 976 aa8.46□□□□□ -1.06
CDC27-219ENST00000576484 PROCP04070 461 aa8.46□□□□□ -1.06
CDC27-219ENST00000576484 VAMP1P23763 118 aa8.46□□□□□ -1.06
CDC27-219ENST00000576484 ITGAEP38570 1179 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms