RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CHAF1AQ13111 956 aaPredicted RBP29.11■■■□□ 2.25
ATPAF1-213ENST00000574428 DIAPH3Q9NSV4 1193 aa29.11■■■□□ 2.25
ATPAF1-213ENST00000574428 JAG2Q9Y219 1238 aa29.11■■■□□ 2.25
ATPAF1-213ENST00000574428 CHGBP05060 677 aa29.11■■■□□ 2.25
ATPAF1-213ENST00000574428 TTF1Q15361 905 aaPredicted RBP29.11■■■□□ 2.25
ATPAF1-213ENST00000574428 SUPT20HQ8NEM7 779 aa29.11■■■□□ 2.25
ATPAF1-213ENST00000574428 IL1R1P14778 569 aa29.1■■■□□ 2.25
ATPAF1-213ENST00000574428 DOK7Q18PE1 504 aa29.1■■■□□ 2.25
ATPAF1-213ENST00000574428 PSMD1Q99460 953 aa29.1■■■□□ 2.25
ATPAF1-213ENST00000574428 SYT17Q9BSW7 474 aa29.09■■■□□ 2.25
ATPAF1-213ENST00000574428 COA1Q9GZY4 146 aa29.09■■■□□ 2.25
ATPAF1-213ENST00000574428 RFX7Q2KHR2 1363 aa29.09■■■□□ 2.25
ATPAF1-213ENST00000574428 PDS5AQ29RF7 1337 aaKnown RBP29.09■■■□□ 2.25
ATPAF1-213ENST00000574428 AOC3Q16853 763 aa29.08■■■□□ 2.25
ATPAF1-213ENST00000574428 MYO5AQ9Y4I1 1855 aaKnown RBP29.08■■■□□ 2.25
ATPAF1-213ENST00000574428 IDH1O75874 414 aaKnown RBP29.08■■■□□ 2.25
ATPAF1-213ENST00000574428 CWC27Q6UX04 472 aaKnown RBP29.08■■■□□ 2.25
ATPAF1-213ENST00000574428 G3V3G9 751 aa29.07■■■□□ 2.24
ATPAF1-213ENST00000574428 HIP1O00291 1037 aa29.07■■■□□ 2.24
ATPAF1-213ENST00000574428 ZBTB22O15209 634 aa29.07■■■□□ 2.24
ATPAF1-213ENST00000574428 NMIQ13287 307 aaPredicted RBP29.07■■■□□ 2.24
ATPAF1-213ENST00000574428 SLFNL1Q499Z3 407 aa29.07■■■□□ 2.24
ATPAF1-213ENST00000574428 DCAF8Q5TAQ9 597 aa29.07■■■□□ 2.24
ATPAF1-213ENST00000574428 FAM227BQ96M60 508 aa29.07■■■□□ 2.24
ATPAF1-213ENST00000574428 DOCK2Q92608 1830 aa29.07■■■□□ 2.24
ATPAF1-213ENST00000574428 KIAA2012Q0VF49 1180 aa29.06■■■□□ 2.24
ATPAF1-213ENST00000574428 ESYT1Q9BSJ8 1104 aa29.06■■■□□ 2.24
ATPAF1-213ENST00000574428 DBNDD1Q9H9R9 158 aa29.06■■■□□ 2.24
ATPAF1-213ENST00000574428 ZNF277Q9NRM2 450 aaPredicted RBP29.06■■■□□ 2.24
ATPAF1-213ENST00000574428 ABCF2Q9UG63 623 aa29.06■■■□□ 2.24
ATPAF1-213ENST00000574428 ARFGEF1Q9Y6D6 1849 aa29.06■■■□□ 2.24
ATPAF1-213ENST00000574428 PPIP5K2O43314 1243 aa29.06■■■□□ 2.24
ATPAF1-213ENST00000574428 IL25Q9H293 177 aa29.06■■■□□ 2.24
ATPAF1-213ENST00000574428 FER1L6Q2WGJ9 1857 aa29.05■■■□□ 2.24
ATPAF1-213ENST00000574428 MFAP1P55081 439 aaKnown RBP29.05■■■□□ 2.24
ATPAF1-213ENST00000574428 A0A0D9SFI3 127 aa29.04■■■□□ 2.24
ATPAF1-213ENST00000574428 RNF113AO15541 343 aaKnown RBP29.04■■■□□ 2.24
ATPAF1-213ENST00000574428 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.04■■■□□ 2.24
ATPAF1-213ENST00000574428 LRP2BPQ9P2M1 347 aa29.04■■■□□ 2.24
ATPAF1-213ENST00000574428 MYH7P12883 1935 aa29.04■■■□□ 2.24
ATPAF1-213ENST00000574428 SRCAPQ6ZRS2 3230 aa29.03■■■□□ 2.24
ATPAF1-213ENST00000574428 CHD4Q14839 1912 aa29.03■■■□□ 2.24
ATPAF1-213ENST00000574428 NFKBIEO00221 500 aa29.03■■■□□ 2.24
ATPAF1-213ENST00000574428 TAOK3Q9H2K8 898 aa29.03■■■□□ 2.24
ATPAF1-213ENST00000574428 ECE2O60344 883 aa29.02■■■□□ 2.24
ATPAF1-213ENST00000574428 MAP3K12Q12852 859 aa29.02■■■□□ 2.24
ATPAF1-213ENST00000574428 LRRFIP1Q32MZ4 808 aaKnown RBP29.02■■■□□ 2.24
ATPAF1-213ENST00000574428 SLC9C2Q5TAH2 1124 aa29.02■■■□□ 2.24
ATPAF1-213ENST00000574428 WDR66Q8TBY9 1149 aa29.02■■■□□ 2.24
ATPAF1-213ENST00000574428 SGSM2O43147 1006 aa29.01■■■□□ 2.23
ATPAF1-213ENST00000574428 TICAM2Q86XR7 235 aa29.01■■■□□ 2.23
ATPAF1-213ENST00000574428 RUFY2Q8WXA3 655 aa29.01■■■□□ 2.23
ATPAF1-213ENST00000574428 ZFYP08048 801 aaPredicted RBP29.01■■■□□ 2.23
ATPAF1-213ENST00000574428 PDE6AP16499 860 aa29.01■■■□□ 2.23
ATPAF1-213ENST00000574428 GTF2IP78347 998 aa29.01■■■□□ 2.23
ATPAF1-213ENST00000574428 FBXW7Q969H0 707 aa29.01■■■□□ 2.23
ATPAF1-213ENST00000574428 RAI14Q9P0K7 980 aa29.01■■■□□ 2.23
ATPAF1-213ENST00000574428 COL4A5P29400 1685 aa29■■■□□ 2.23
ATPAF1-213ENST00000574428 ADD2P35612 726 aa29■■■□□ 2.23
ATPAF1-213ENST00000574428 ZSCAN25Q6NSZ9 544 aa29■■■□□ 2.23
ATPAF1-213ENST00000574428 PODNQ7Z5L7 613 aa29■■■□□ 2.23
ATPAF1-213ENST00000574428 LARGE2Q8N3Y3 721 aa29■■■□□ 2.23
ATPAF1-213ENST00000574428 SEC62Q99442 399 aaKnown RBP29■■■□□ 2.23
ATPAF1-213ENST00000574428 FAM205AQ6ZU69 1335 aa29■■■□□ 2.23
ATPAF1-213ENST00000574428 SALL1Q9NSC2 1324 aa29■■■□□ 2.23
ATPAF1-213ENST00000574428 ZMYM1Q5SVZ6 1142 aa28.99■■■□□ 2.23
ATPAF1-213ENST00000574428 MAGEB6Q8N7X4 407 aa28.99■■■□□ 2.23
ATPAF1-213ENST00000574428 KCNQ5Q9NR82 932 aa28.99■■■□□ 2.23
ATPAF1-213ENST00000574428 PRDX5P30044 214 aa28.98■■■□□ 2.23
ATPAF1-213ENST00000574428 IARSP41252 1262 aaKnown RBP28.98■■■□□ 2.23
ATPAF1-213ENST00000574428 ZNF532Q9HCE3 1301 aa28.98■■■□□ 2.23
ATPAF1-213ENST00000574428 RASSF7Q02833 373 aa28.98■■■□□ 2.23
ATPAF1-213ENST00000574428 ERICH6Q7L0X2 663 aa28.98■■■□□ 2.23
ATPAF1-213ENST00000574428 TCRBV5S4A2TA0A5A2 114 aa28.97■■■□□ 2.23
ATPAF1-213ENST00000574428 GRIK5Q16478 980 aa28.97■■■□□ 2.23
ATPAF1-213ENST00000574428 MFSD14BQ5SR56 506 aa28.97■■■□□ 2.23
ATPAF1-213ENST00000574428 ZGPATQ8N5A5 531 aaKnown RBP28.97■■■□□ 2.23
ATPAF1-213ENST00000574428 VPS33BQ9H267 617 aa28.97■■■□□ 2.23
ATPAF1-213ENST00000574428 TTLL5Q6EMB2 1281 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 CCDC129Q6ZRS4 1044 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 ZNF589Q86UQ0 364 aaPredicted RBP28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 OSBP2Q969R2 916 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 RAD50Q92878 1312 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 SCN9AQ15858 1988 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 M0R2C6 588 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 REC8O95072 547 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 UBE3CQ15386 1083 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 MCMDC2Q4G0Z9 681 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 APPBP2Q92624 585 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 ANO2Q9NQ90 1003 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 HELLSQ9NRZ9 838 aa28.96■■■□□ 2.23
ATPAF1-213ENST00000574428 MAST3O60307 1309 aa28.95■■■□□ 2.23
ATPAF1-213ENST00000574428 LTBP3Q9NS15 1303 aa28.95■■■□□ 2.23
ATPAF1-213ENST00000574428 YDJCA8MPS7 323 aa28.95■■■□□ 2.22
ATPAF1-213ENST00000574428 LDHBP07195 334 aaKnown RBP28.95■■■□□ 2.22
ATPAF1-213ENST00000574428 SPTY2D1Q68D10 685 aaPredicted RBP28.95■■■□□ 2.22
ATPAF1-213ENST00000574428 ZNF384Q8TF68 577 aa28.95■■■□□ 2.22
ATPAF1-213ENST00000574428 TBC1D22AQ8WUA7 517 aa28.95■■■□□ 2.22
ATPAF1-213ENST00000574428 MAST2Q6P0Q8 1798 aa28.95■■■□□ 2.22
ATPAF1-213ENST00000574428 MECOMQ03112 1051 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms