RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 GDAP1L1Q96MZ0 367 aa13.13□□□□□ -0.31
EDC4-207ENST00000573992 JADE2Q9NQC1 790 aa13.13□□□□□ -0.31
EDC4-207ENST00000573992 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
EDC4-207ENST00000573992 CDKL5O76039 1030 aa13.13□□□□□ -0.31
EDC4-207ENST00000573992 ZRANB2O95218 330 aaKnown RBP eCLIP13.13□□□□□ -0.31
EDC4-207ENST00000573992 CCDC121Q6ZUS5 278 aa13.13□□□□□ -0.31
EDC4-207ENST00000573992 NUTM2AQ8IVF1 878 aaPredicted RBP13.13□□□□□ -0.31
EDC4-207ENST00000573992 PI4KAP2A4QPH2 592 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
EDC4-207ENST00000573992 DHX40Q8IX18 779 aaKnown RBP13.12□□□□□ -0.31
EDC4-207ENST00000573992 PI4KAP1Q8N8J0 262 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 CAPZA3Q96KX2 299 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 CEP89Q96ST8 783 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 PCDHA7Q9UN72 937 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 TTF2Q9UNY4 1162 aaKnown RBP13.12□□□□□ -0.31
EDC4-207ENST00000573992 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 RESTQ13127 1097 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
EDC4-207ENST00000573992 WHAMMP3Q1A5X7 153 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 PLCD4Q9BRC7 762 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 MYO6Q9UM54 1294 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 GUCA1BQ9UMX6 200 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 GOLGA8BA8MQT2 603 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 NDUFA8P51970 172 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 GNGT1P63211 74 aa13.12□□□□□ -0.31
EDC4-207ENST00000573992 FTOQ9C0B1 505 aaKnown RBP eCLIP13.12□□□□□ -0.31
EDC4-207ENST00000573992 N4BP3O15049 544 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 MYO1BO43795 1136 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 SSBP05455 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
EDC4-207ENST00000573992 WWC2Q6AWC2 1192 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 DHX32Q7L7V1 743 aaKnown RBP13.11□□□□□ -0.31
EDC4-207ENST00000573992 PACS2Q86VP3 889 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 EHBP1Q8NDI1 1231 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 CAPS2Q9BXY5 557 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 FUT8Q9BYC5 575 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 PAFAH1B1P43034 410 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 MATR3P43243 847 aaKnown RBP eCLIP13.11□□□□□ -0.31
EDC4-207ENST00000573992 CEP85LQ5SZL2 805 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 BRAPQ7Z569 592 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 CROCC2H7BZ55 1655 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 IKBKBO14920 756 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 ATP2C2O75185 946 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 GIGYF1O75420 1035 aaPredicted RBP13.11□□□□□ -0.31
EDC4-207ENST00000573992 SSR1P43307 286 aaKnown RBP13.11□□□□□ -0.31
EDC4-207ENST00000573992 MLECQ14165 292 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 IGSF22Q8N9C0 903 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
EDC4-207ENST00000573992 RSRC1Q96IZ7 334 aaKnown RBP13.11□□□□□ -0.31
EDC4-207ENST00000573992 CTAGE1Q96RT6 745 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 MAGEC2Q9UBF1 373 aaPredicted RBP13.11□□□□□ -0.31
EDC4-207ENST00000573992 PA2G4Q9UQ80 394 aaKnown RBP13.11□□□□□ -0.31
EDC4-207ENST00000573992 NFE2L3Q9Y4A8 694 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 CCDC61Q9Y6R9 512 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 FAM169AQ9Y6X4 670 aa13.11□□□□□ -0.31
EDC4-207ENST00000573992 ATP1A3P13637 1013 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 CNGA4Q8IV77 575 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 FANCLQ9NW38 375 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 CDC42BPAQ5VT25 1732 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 MAP4K1Q92918 833 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 MRFAP1Q9Y605 127 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 PARP3Q9Y6F1 533 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 WAPLQ7Z5K2 1190 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 ANKRD18AQ8IVF6 992 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 ODF2LQ9ULJ1 636 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 SHROOM2Q13796 1616 aa13.1□□□□□ -0.31
EDC4-207ENST00000573992 RBM43Q6ZSC3 357 aaKnown RBP13.09□□□□□ -0.31
EDC4-207ENST00000573992 NCOA5Q9HCD5 579 aaKnown RBP13.09□□□□□ -0.31
EDC4-207ENST00000573992 VSTM4Q8IW00 320 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 WDR24Q96S15 920 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 ATP10DQ9P241 1426 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 A0A1W2PQ27 194 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 A0A1W2PQ64 194 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 A0A1W2PQD8 194 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 MAP3K9P80192 1104 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 EIF4A2Q14240 407 aaKnown RBP13.09□□□□□ -0.31
EDC4-207ENST00000573992 NECTIN1Q15223 517 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 SLC52A1Q9NWF4 448 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 MADDQ8WXG6 1647 aa13.09□□□□□ -0.31
EDC4-207ENST00000573992 SASH3O75995 380 aa13.08□□□□□ -0.31
EDC4-207ENST00000573992 NUDT16Q96DE0 195 aaKnown RBP13.08□□□□□ -0.31
EDC4-207ENST00000573992 TTC21BQ7Z4L5 1316 aa13.08□□□□□ -0.32
EDC4-207ENST00000573992 SPA17Q15506 151 aa13.08□□□□□ -0.32
EDC4-207ENST00000573992 OTUD7BQ6GQQ9 843 aa13.08□□□□□ -0.32
EDC4-207ENST00000573992 KANK3Q6NY19 840 aa13.08□□□□□ -0.32
EDC4-207ENST00000573992 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.32
EDC4-207ENST00000573992 CCDC50Q8IVM0 306 aa13.08□□□□□ -0.32
EDC4-207ENST00000573992 PI4K2BQ8TCG2 481 aa13.08□□□□□ -0.32
EDC4-207ENST00000573992 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
EDC4-207ENST00000573992 N4BP2L2Q92802 583 aaPredicted RBP13.08□□□□□ -0.32
EDC4-207ENST00000573992 NAA15Q9BXJ9 866 aaKnown RBP13.08□□□□□ -0.32
EDC4-207ENST00000573992 PLEKHG2Q9H7P9 1386 aa13.08□□□□□ -0.32
EDC4-207ENST00000573992 CUTAO60888 179 aa13.08□□□□□ -0.32
EDC4-207ENST00000573992 SPATS2Q86XZ4 545 aaKnown RBP13.08□□□□□ -0.32
EDC4-207ENST00000573992 CCDC47Q96A33 483 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms