RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 PARP3Q9Y6F1 533 aa16.57■□□□□ 0.24
TVP23A-207ENST00000573360 GNL3LQ9NVN8 582 aaKnown RBP16.56■□□□□ 0.24
TVP23A-207ENST00000573360 PTMSP20962 102 aa16.56■□□□□ 0.24
TVP23A-207ENST00000573360 MAP3K12Q12852 859 aa16.56■□□□□ 0.24
TVP23A-207ENST00000573360 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
TVP23A-207ENST00000573360 CYP7A1P22680 504 aa16.56■□□□□ 0.24
TVP23A-207ENST00000573360 NUCB2P80303 420 aa16.56■□□□□ 0.24
TVP23A-207ENST00000573360 MBD4O95243 580 aa16.55■□□□□ 0.24
TVP23A-207ENST00000573360 INCENPQ9NQS7 918 aa16.55■□□□□ 0.24
TVP23A-207ENST00000573360 MINDY4BA8MYZ0 360 aa16.55■□□□□ 0.24
TVP23A-207ENST00000573360 BSDC1Q9NW68 430 aaPredicted RBP16.55■□□□□ 0.24
TVP23A-207ENST00000573360 CARMIL3Q8ND23 1372 aa16.55■□□□□ 0.24
TVP23A-207ENST00000573360 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
TVP23A-207ENST00000573360 UQCRFS1P1P0C7P4 283 aa16.55■□□□□ 0.24
TVP23A-207ENST00000573360 HSPD1P10809 573 aaKnown RBP16.55■□□□□ 0.24
TVP23A-207ENST00000573360 SF3B3Q15393 1217 aaKnown RBP16.55■□□□□ 0.24
TVP23A-207ENST00000573360 PRKAB2O43741 272 aa16.54■□□□□ 0.24
TVP23A-207ENST00000573360 CYP21A2P08686 494 aa16.54■□□□□ 0.24
TVP23A-207ENST00000573360 PDE6AP16499 860 aa16.54■□□□□ 0.24
TVP23A-207ENST00000573360 LRRFIP1Q32MZ4 808 aaKnown RBP16.54■□□□□ 0.24
TVP23A-207ENST00000573360 MAP4K1Q92918 833 aa16.54■□□□□ 0.24
TVP23A-207ENST00000573360 CHRNA5P30532 468 aa16.54■□□□□ 0.24
TVP23A-207ENST00000573360 HIBADHP31937 336 aaKnown RBP16.54■□□□□ 0.24
TVP23A-207ENST00000573360 TMX4Q9H1E5 349 aaPredicted RBP16.54■□□□□ 0.24
TVP23A-207ENST00000573360 STK32BQ9NY57 414 aa16.54■□□□□ 0.24
TVP23A-207ENST00000573360 FBXO3Q9UK99 471 aa16.54■□□□□ 0.24
TVP23A-207ENST00000573360 FBXO41Q8TF61 875 aa16.53■□□□□ 0.24
TVP23A-207ENST00000573360 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
TVP23A-207ENST00000573360 ZNF804BA4D1E1 1349 aa16.53■□□□□ 0.24
TVP23A-207ENST00000573360 TDO2P48775 406 aa16.53■□□□□ 0.24
TVP23A-207ENST00000573360 SDR42E1Q8WUS8 393 aa16.53■□□□□ 0.24
TVP23A-207ENST00000573360 MTMR7Q9Y216 660 aa16.53■□□□□ 0.24
TVP23A-207ENST00000573360 BTAF1O14981 1849 aa16.53■□□□□ 0.24
TVP23A-207ENST00000573360 DDX11Q96FC9 970 aa16.52■□□□□ 0.24
TVP23A-207ENST00000573360 RBM27Q9P2N5 1060 aaKnown RBP16.52■□□□□ 0.24
TVP23A-207ENST00000573360 TJP1Q07157 1748 aa16.52■□□□□ 0.24
TVP23A-207ENST00000573360 ZBTB7AO95365 584 aa16.52■□□□□ 0.24
TVP23A-207ENST00000573360 LARGE1O95461 756 aa16.52■□□□□ 0.24
TVP23A-207ENST00000573360 CCT2P78371 535 aaKnown RBP16.52■□□□□ 0.24
TVP23A-207ENST00000573360 ZMYM1Q5SVZ6 1142 aa16.52■□□□□ 0.24
TVP23A-207ENST00000573360 FAM84BQ96KN1 310 aaPredicted RBP16.52■□□□□ 0.24
TVP23A-207ENST00000573360 NUP98P52948 1817 aa16.52■□□□□ 0.23
TVP23A-207ENST00000573360 MSNP26038 577 aaKnown RBP16.52■□□□□ 0.23
TVP23A-207ENST00000573360 NECTIN1Q15223 517 aa16.52■□□□□ 0.23
TVP23A-207ENST00000573360 DOK7Q18PE1 504 aa16.52■□□□□ 0.23
TVP23A-207ENST00000573360 NLGN1Q8N2Q7 840 aa16.52■□□□□ 0.23
TVP23A-207ENST00000573360 BRF1Q92994 677 aa16.52■□□□□ 0.23
TVP23A-207ENST00000573360 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.23
TVP23A-207ENST00000573360 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.23
TVP23A-207ENST00000573360 APPBP2Q92624 585 aa16.51■□□□□ 0.23
TVP23A-207ENST00000573360 NEK1Q96PY6 1258 aa16.51■□□□□ 0.23
TVP23A-207ENST00000573360 DENND2AQ9ULE3 1009 aa16.51■□□□□ 0.23
TVP23A-207ENST00000573360 FGAP02671 866 aa16.51■□□□□ 0.23
TVP23A-207ENST00000573360 ADRA2BP18089 450 aa16.51■□□□□ 0.23
TVP23A-207ENST00000573360 PRDX5P30044 214 aa16.51■□□□□ 0.23
TVP23A-207ENST00000573360 VPS37CA5D8V6 355 aaPredicted RBP16.51■□□□□ 0.23
TVP23A-207ENST00000573360 CLCN1P35523 988 aa16.51■□□□□ 0.23
TVP23A-207ENST00000573360 DDIT3P35638 169 aa16.51■□□□□ 0.23
TVP23A-207ENST00000573360 RALYLQ86SE5 291 aaKnown RBP16.51■□□□□ 0.23
TVP23A-207ENST00000573360 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
TVP23A-207ENST00000573360 GRAPQ13588 217 aa16.5■□□□□ 0.23
TVP23A-207ENST00000573360 TTF1Q15361 905 aaPredicted RBP16.5■□□□□ 0.23
TVP23A-207ENST00000573360 GRAPLQ8TC17 118 aaPredicted RBP16.5■□□□□ 0.23
TVP23A-207ENST00000573360 SLC4A4Q9Y6R1 1079 aa16.5■□□□□ 0.23
TVP23A-207ENST00000573360 U3KPZ7 1027 aaPredicted RBP16.5■□□□□ 0.23
TVP23A-207ENST00000573360 FGFR2P21802 821 aa16.5■□□□□ 0.23
TVP23A-207ENST00000573360 BAG6P46379 1132 aa16.5■□□□□ 0.23
TVP23A-207ENST00000573360 DYNLL1P63167 89 aaKnown RBP16.5■□□□□ 0.23
TVP23A-207ENST00000573360 CCDC144CPQ8IYA2 1237 aa16.5■□□□□ 0.23
TVP23A-207ENST00000573360 NAPBQ9H115 298 aa16.5■□□□□ 0.23
TVP23A-207ENST00000573360 AATFQ9NY61 560 aaKnown RBP eCLIP16.5■□□□□ 0.23
TVP23A-207ENST00000573360 POLRMTO00411 1230 aaKnown RBP16.5■□□□□ 0.23
TVP23A-207ENST00000573360 RXRAP19793 462 aa16.5■□□□□ 0.23
TVP23A-207ENST00000573360 PSMA5P28066 241 aa16.5■□□□□ 0.23
TVP23A-207ENST00000573360 DZIP1Q86YF9 867 aaKnown RBP16.5■□□□□ 0.23
TVP23A-207ENST00000573360 RBM17Q96I25 401 aaKnown RBP16.5■□□□□ 0.23
TVP23A-207ENST00000573360 ZNF213O14771 459 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 GPSM2P81274 684 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 Q6ZUG5 572 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 ZKSCAN3Q9BRR0 538 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 CTDSPL2Q05D32 466 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
TVP23A-207ENST00000573360 NAA16Q6N069 864 aaPredicted RBP16.49■□□□□ 0.23
TVP23A-207ENST00000573360 ZSCAN25Q6NSZ9 544 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 SMC3Q9UQE7 1217 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 PRDM1O75626 825 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 ANAPC15P60006 121 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 DIXDC1Q155Q3 683 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 FERMT3Q86UX7 667 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 HELLSQ9NRZ9 838 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 ISY1Q9ULR0 285 aaKnown RBP16.49■□□□□ 0.23
TVP23A-207ENST00000573360 TAF1P21675 1872 aa16.49■□□□□ 0.23
TVP23A-207ENST00000573360 CYP2D7A0A087X1C5 515 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 ADD2P35612 726 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 UBE4AQ14139 1066 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 KLHL40Q2TBA0 621 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 SLC10A5Q5PT55 438 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 SMIM22K7EJ46 135 aa16.48■□□□□ 0.23
TVP23A-207ENST00000573360 PLSCR1O15162 318 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms