RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 EIF5P55010 431 aaKnown RBP6.22□□□□□ -1.41
CNOT1-219ENST00000569882 EIF4A1P60842 406 aaKnown RBP6.22□□□□□ -1.41
CNOT1-219ENST00000569882 GNAI1P63096 354 aa6.22□□□□□ -1.41
CNOT1-219ENST00000569882 AIMP1Q12904 312 aaKnown RBP6.22□□□□□ -1.41
CNOT1-219ENST00000569882 NFIXQ14938 502 aa6.22□□□□□ -1.41
CNOT1-219ENST00000569882 DALRD3Q5D0E6 543 aaKnown RBP6.22□□□□□ -1.41
CNOT1-219ENST00000569882 RTL5Q5HYW3 569 aaPredicted RBP6.22□□□□□ -1.41
CNOT1-219ENST00000569882 HDGFL1Q5TGJ6 251 aa6.22□□□□□ -1.41
CNOT1-219ENST00000569882 PRPF38BQ5VTL8 546 aaKnown RBP6.22□□□□□ -1.41
CNOT1-219ENST00000569882 ARHGAP27Q6ZUM4 889 aa6.22□□□□□ -1.41
CNOT1-219ENST00000569882 ZNF622Q969S3 477 aaKnown RBP eCLIP6.22□□□□□ -1.417e-10■□□□□ 9.3
CNOT1-219ENST00000569882 TMX4Q9H1E5 349 aaPredicted RBP6.22□□□□□ -1.41
CNOT1-219ENST00000569882 BABAM1Q9NWV8 329 aa6.22□□□□□ -1.41
CNOT1-219ENST00000569882 NIP7Q9Y221 180 aaKnown RBP eCLIP6.22□□□□□ -1.41
CNOT1-219ENST00000569882 AFDNP55196 1824 aaKnown RBP6.22□□□□□ -1.41
CNOT1-219ENST00000569882 CACNA1SQ13698 1873 aa6.22□□□□□ -1.41
CNOT1-219ENST00000569882 BCORQ6W2J9 1755 aa6.21□□□□□ -1.41
CNOT1-219ENST00000569882 POLRMTO00411 1230 aaKnown RBP6.21□□□□□ -1.42
CNOT1-219ENST00000569882 LILRB3O75022 631 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 DPEP1P16444 411 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 PDE6BP35913 854 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 DDR1Q08345 913 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 TBC1D9BQ66K14 1250 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 TPTE2Q6XPS3 522 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 C2CD5Q86YS7 1000 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 ZNF511Q8NB15 262 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 STK31Q9BXU1 1019 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 NYXQ9GZU5 481 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 C10orf71Q711Q0 1435 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 ERBB4Q15303 1308 aa6.21□□□□□ -1.42
CNOT1-219ENST00000569882 KIF13BQ9NQT8 1826 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 ELL2O00472 640 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-219ENST00000569882 F12P00748 615 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-219ENST00000569882 YBX3P16989 372 aaKnown RBP eCLIP6.2□□□□□ -1.424e-11■□□□□ 10.1
CNOT1-219ENST00000569882 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-219ENST00000569882 GPTP24298 496 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 CHRNA5P30532 468 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 XP32Q5T750 250 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 CLEC4GQ6UXB4 293 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 TMEM151AQ8N4L1 468 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 ZNF526Q8TF50 670 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-219ENST00000569882 IFT57Q9NWB7 429 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 TLL2Q9Y6L7 1015 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 PXDNLA1KZ92 1463 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 MAP3K15Q6ZN16 1313 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 NUP98P52948 1817 aa6.2□□□□□ -1.42
CNOT1-219ENST00000569882 CAMTA2O94983 1202 aa6.19□□□□□ -1.42
CNOT1-219ENST00000569882 DDX58O95786 925 aaKnown RBP6.19□□□□□ -1.42
CNOT1-219ENST00000569882 TM4SF1P30408 202 aa6.19□□□□□ -1.42
CNOT1-219ENST00000569882 CLK2P49760 499 aaKnown RBP6.19□□□□□ -1.42
CNOT1-219ENST00000569882 HSP90AB3PQ58FF7 597 aa6.19□□□□□ -1.42
CNOT1-219ENST00000569882 DUSP27Q5VZP5 1158 aa6.19□□□□□ -1.42
CNOT1-219ENST00000569882 PPP1R42Q7Z4L9 355 aa6.19□□□□□ -1.42
CNOT1-219ENST00000569882 TTLL6Q8N841 843 aa6.19□□□□□ -1.42
CNOT1-219ENST00000569882 RPGRQ92834 1020 aaKnown RBP6.19□□□□□ -1.42
CNOT1-219ENST00000569882 FOXJ1Q92949 421 aa6.19□□□□□ -1.42
CNOT1-219ENST00000569882 FAM117AQ9C073 453 aa6.19□□□□□ -1.42
CNOT1-219ENST00000569882 KDM4CQ9H3R0 1056 aa6.19□□□□□ -1.42
CNOT1-219ENST00000569882 MBIPQ9NS73 344 aa6.19□□□□□ -1.42
CNOT1-219ENST00000569882 DBF4Q9UBU7 674 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-219ENST00000569882 NXF1Q9UBU9 619 aaKnown RBP6.19□□□□□ -1.42
CNOT1-219ENST00000569882 ERVV-1B6SEH8 477 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 CHL1O00533 1208 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 ANXA1P04083 346 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 HOXB7P09629 217 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 KCNMA1Q12791 1236 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 KRT24Q2M2I5 525 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 TUSC1Q2TAM9 212 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 CCDC184Q52MB2 194 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 CCDC30Q5VVM6 783 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 PRR5LQ6MZQ0 368 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 NBPF10Q6P3W6 841 aaKnown RBP6.18□□□□□ -1.42
CNOT1-219ENST00000569882 C16orf71Q8IYS4 520 aaPredicted RBP6.18□□□□□ -1.42
CNOT1-219ENST00000569882 NBPF15Q8N660 670 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 XAGE3Q8WTP9 111 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 CNKSR1Q969H4 720 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 BRIP1Q9BX63 1249 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 MYH16Q9H6N6 1097 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 DDX21Q9NR30 783 aaKnown RBP eCLIP6.18□□□□□ -1.42
CNOT1-219ENST00000569882 HYPKQ9NX55 129 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 CHPF2Q9P2E5 772 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 ARFGEF1Q9Y6D6 1849 aa6.18□□□□□ -1.42
CNOT1-219ENST00000569882 DLEC1Q9Y238 1755 aa6.17□□□□□ -1.42
CNOT1-219ENST00000569882 PARP10Q53GL7 1025 aa6.17□□□□□ -1.42
CNOT1-219ENST00000569882 SOGA3Q5TF21 947 aa6.17□□□□□ -1.42
CNOT1-219ENST00000569882 TTLL7Q6ZT98 887 aa6.17□□□□□ -1.42
CNOT1-219ENST00000569882 COPS6Q7L5N1 327 aa6.17□□□□□ -1.42
CNOT1-219ENST00000569882 PROCA1Q8NCQ7 364 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-219ENST00000569882 TSR2Q969E8 191 aaKnown RBP6.17□□□□□ -1.42
CNOT1-219ENST00000569882 MASTLQ96GX5 879 aa6.17□□□□□ -1.42
CNOT1-219ENST00000569882 UTP14AQ9BVJ6 771 aaKnown RBP6.17□□□□□ -1.42
CNOT1-219ENST00000569882 RNF181Q9P0P0 153 aa6.17□□□□□ -1.42
CNOT1-219ENST00000569882 WASF2Q9Y6W5 498 aa6.17□□□□□ -1.42
CNOT1-219ENST00000569882 BRCA1P38398 1863 aaKnown RBP6.17□□□□□ -1.42
CNOT1-219ENST00000569882 NRXN2Q9P2S2 1712 aa6.16□□□□□ -1.42
CNOT1-219ENST00000569882 ANKRD36CQ5JPF3 1778 aa6.16□□□□□ -1.42
CNOT1-219ENST00000569882 C21orf2O43822 256 aa6.16□□□□□ -1.42
CNOT1-219ENST00000569882 GDF11O95390 407 aa6.16□□□□□ -1.42
CNOT1-219ENST00000569882 BMP1P13497 986 aa6.16□□□□□ -1.42
CNOT1-219ENST00000569882 HSP90B1P14625 803 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms