RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 ITGA6P23229 1130 aa13.77□□□□□ -0.21
LPCAT4-208ENST00000569804 RANBP2P49792 3224 aaKnown RBP13.77□□□□□ -0.21
LPCAT4-208ENST00000569804 INHBEP58166 350 aa13.77□□□□□ -0.21
LPCAT4-208ENST00000569804 C15orf52Q6ZUT6 534 aaKnown RBP13.77□□□□□ -0.21
LPCAT4-208ENST00000569804 PTPN18Q99952 460 aa13.77□□□□□ -0.21
LPCAT4-208ENST00000569804 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
LPCAT4-208ENST00000569804 PTPN22Q9Y2R2 807 aa13.77□□□□□ -0.21
LPCAT4-208ENST00000569804 PPP2R3BQ9Y5P8 575 aa13.77□□□□□ -0.21
LPCAT4-208ENST00000569804 CACNA1FO60840 1977 aa13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 UNCXA6NJT0 531 aa13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 IGHMBP2P38935 993 aaKnown RBP13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 FXR1P51114 621 aaKnown RBP eCLIP13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 CHRNDQ07001 517 aa13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 CRHR2Q13324 411 aa13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 INTS3Q68E01 1043 aaKnown RBP13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 G2E3Q7L622 706 aa13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 CD99L2Q8TCZ2 262 aa13.76□□□□□ -0.21
LPCAT4-208ENST00000569804 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
LPCAT4-208ENST00000569804 GCKRQ14397 625 aa13.75□□□□□ -0.21
LPCAT4-208ENST00000569804 SLC10A4Q96EP9 437 aa13.75□□□□□ -0.21
LPCAT4-208ENST00000569804 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
LPCAT4-208ENST00000569804 CLRN2A0PK11 232 aa13.74□□□□□ -0.21
LPCAT4-208ENST00000569804 USP2O75604 605 aaPredicted RBP13.74□□□□□ -0.21
LPCAT4-208ENST00000569804 IL1R1P14778 569 aa13.74□□□□□ -0.21
LPCAT4-208ENST00000569804 EN2P19622 333 aaPredicted RBP13.74□□□□□ -0.21
LPCAT4-208ENST00000569804 DLGAP5Q15398 846 aa13.74□□□□□ -0.21
LPCAT4-208ENST00000569804 CFAP100Q494V2 611 aa13.74□□□□□ -0.21
LPCAT4-208ENST00000569804 NBPF12Q5TAG4 269 aaPredicted RBP13.74□□□□□ -0.21
LPCAT4-208ENST00000569804 ERO1AQ96HE7 468 aa13.74□□□□□ -0.21
LPCAT4-208ENST00000569804 PRMT6Q96LA8 375 aaPredicted RBP13.74□□□□□ -0.21
LPCAT4-208ENST00000569804 FKBP1AP62942 108 aaKnown RBP13.73□□□□□ -0.21
LPCAT4-208ENST00000569804 NEXNQ0ZGT2 675 aa13.73□□□□□ -0.21
LPCAT4-208ENST00000569804 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
LPCAT4-208ENST00000569804 CDAN1Q8IWY9 1227 aa13.73□□□□□ -0.21
LPCAT4-208ENST00000569804 TSR2Q969E8 191 aaKnown RBP13.73□□□□□ -0.21
LPCAT4-208ENST00000569804 ZNF333Q96JL9 665 aa13.73□□□□□ -0.21
LPCAT4-208ENST00000569804 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
LPCAT4-208ENST00000569804 PPP1R12BO60237 982 aaPredicted RBP13.72□□□□□ -0.21
LPCAT4-208ENST00000569804 MPHOSPH8Q99549 860 aa13.72□□□□□ -0.21
LPCAT4-208ENST00000569804 F8W031 263 aaPredicted RBP13.71□□□□□ -0.21
LPCAT4-208ENST00000569804 TAF5LO75529 589 aa13.71□□□□□ -0.21
LPCAT4-208ENST00000569804 RASA3Q14644 834 aa13.71□□□□□ -0.21
LPCAT4-208ENST00000569804 ANKRD13AQ8IZ07 590 aa13.71□□□□□ -0.21
LPCAT4-208ENST00000569804 TEPSINQ96N21 525 aa13.71□□□□□ -0.21
LPCAT4-208ENST00000569804 PRKRIP1Q9H875 184 aaPredicted RBP13.71□□□□□ -0.21
LPCAT4-208ENST00000569804 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
LPCAT4-208ENST00000569804 KCNJ4P48050 445 aa13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 IREB2P48200 963 aaKnown RBP13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 FOXO4P98177 505 aa13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 SP3Q02447 781 aa13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 FLIIQ13045 1269 aa13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 SUPT20HL1Q3ZLR7 823 aa13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 HELBQ8NG08 1087 aaPredicted RBP13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 CNKSR2Q8WXI2 1034 aa13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 BRI3BPQ8WY22 251 aa13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 CHMP4AQ9BY43 222 aa13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 VEZTQ9HBM0 779 aa13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 JAG2Q9Y219 1238 aa13.7□□□□□ -0.22
LPCAT4-208ENST00000569804 TWISTNBQ3B726 338 aaPredicted RBP13.69□□□□□ -0.22
LPCAT4-208ENST00000569804 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
LPCAT4-208ENST00000569804 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.69□□□□□ -0.22
LPCAT4-208ENST00000569804 LINS1Q8NG48 757 aa13.69□□□□□ -0.22
LPCAT4-208ENST00000569804 DNAAF4Q8WXU2 420 aa13.69□□□□□ -0.22
LPCAT4-208ENST00000569804 OPTNQ96CV9 577 aa13.69□□□□□ -0.22
LPCAT4-208ENST00000569804 STK31Q9BXU1 1019 aa13.69□□□□□ -0.22
LPCAT4-208ENST00000569804 ELP3Q9H9T3 547 aa13.69□□□□□ -0.22
LPCAT4-208ENST00000569804 PTCH2Q9Y6C5 1203 aa13.69□□□□□ -0.22
LPCAT4-208ENST00000569804 FAM205AQ6ZU69 1335 aa13.68□□□□□ -0.22
LPCAT4-208ENST00000569804 ANKRD18BA2A2Z9 1011 aa13.68□□□□□ -0.22
LPCAT4-208ENST00000569804 MYO1BO43795 1136 aa13.68□□□□□ -0.22
LPCAT4-208ENST00000569804 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
LPCAT4-208ENST00000569804 OTUD7BQ6GQQ9 843 aa13.68□□□□□ -0.22
LPCAT4-208ENST00000569804 ZNF804AQ7Z570 1209 aa13.68□□□□□ -0.22
LPCAT4-208ENST00000569804 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
LPCAT4-208ENST00000569804 LAMA3Q16787 3333 aa13.67□□□□□ -0.22
LPCAT4-208ENST00000569804 VGLL4Q14135 290 aa13.67□□□□□ -0.22
LPCAT4-208ENST00000569804 EPHA10Q5JZY3 1008 aa13.67□□□□□ -0.22
LPCAT4-208ENST00000569804 FAM43AQ8N2R8 423 aa13.67□□□□□ -0.22
LPCAT4-208ENST00000569804 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.67□□□□□ -0.22
LPCAT4-208ENST00000569804 MYH16Q9H6N6 1097 aa13.67□□□□□ -0.22
LPCAT4-208ENST00000569804 ZNF70Q9UC06 446 aaPredicted RBP13.67□□□□□ -0.22
LPCAT4-208ENST00000569804 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
LPCAT4-208ENST00000569804 TDRD7Q8NHU6 1098 aaKnown RBP13.66□□□□□ -0.22
LPCAT4-208ENST00000569804 OTUD5Q96G74 571 aa13.66□□□□□ -0.22
LPCAT4-208ENST00000569804 SERPINA10Q9UK55 444 aa13.66□□□□□ -0.22
LPCAT4-208ENST00000569804 IFIT5Q13325 482 aaKnown RBP13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 FKBP5Q13451 457 aaPredicted RBP13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 TAF1CQ15572 869 aaPredicted RBP13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 GRIK5Q16478 980 aa13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 MFSD14BQ5SR56 506 aa13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 BEND3Q5T5X7 828 aa13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 WWC1Q8IX03 1113 aa13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 SHISA4Q96DD7 197 aa13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 ZNF594Q96JF6 807 aaPredicted RBP13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 ARHGAP39Q9C0H5 1083 aa13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 TMEM39BQ9GZU3 492 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms