RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 RGPD2P0DJD1 1756 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 PPIP5K2O43314 1243 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 HIP1RO75146 1068 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 PHKG2P15735 406 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 MARCH10Q8NA82 808 aaPredicted RBP7.84□□□□□ -1.15
SMG1-217ENST00000569764 SUPT20HL1Q3ZLR7 823 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 SYCP2LQ5T4T6 812 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 PCMTD1Q96MG8 357 aaPredicted RBP7.84□□□□□ -1.15
SMG1-217ENST00000569764 VPS33BQ9H267 617 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 AS3MTQ9HBK9 375 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 SPC25Q9HBM1 224 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 DBF4Q9UBU7 674 aaPredicted RBP7.84□□□□□ -1.15
SMG1-217ENST00000569764 MRPL42Q9Y6G3 142 aaKnown RBP7.84□□□□□ -1.15
SMG1-217ENST00000569764 PABPC4Q13310 644 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMG1-217ENST00000569764 CCDC57Q2TAC2 916 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 MAP9Q49MG5 647 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 TNS4Q8IZW8 715 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 ZGPATQ8N5A5 531 aaKnown RBP7.83□□□□□ -1.16
SMG1-217ENST00000569764 CNNM1Q9NRU3 951 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 NARFQ9UHQ1 456 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 DNAJA1P31689 397 aaKnown RBP7.83□□□□□ -1.16
SMG1-217ENST00000569764 EGFLAMQ63HQ2 1017 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 ANKRD18AQ8IVF6 992 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 FRAT1Q92837 279 aaPredicted RBP7.83□□□□□ -1.16
SMG1-217ENST00000569764 PPP4CP60510 307 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 KRT24Q2M2I5 525 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 NFATC2IPQ8NCF5 419 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 VRTNQ9H8Y1 702 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 SLC52A2Q9HAB3 445 aa7.83□□□□□ -1.16
SMG1-217ENST00000569764 IFIT1P09914 478 aaKnown RBP7.82□□□□□ -1.16
SMG1-217ENST00000569764 DHX8Q14562 1220 aaKnown RBP7.82□□□□□ -1.16
SMG1-217ENST00000569764 TTC39BQ5VTQ0 682 aaPredicted RBP7.82□□□□□ -1.16
SMG1-217ENST00000569764 FAM13BQ9NYF5 915 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 IP6K2Q9UHH9 426 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 INTUQ9ULD6 942 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 CNTNAP4Q9C0A0 1308 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 CTCFP49711 727 aaPredicted RBP7.82□□□□□ -1.16
SMG1-217ENST00000569764 SSH1Q8WYL5 1049 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 GCC1Q96CN9 775 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 CEP126Q9P2H0 1117 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 BIN2Q9UBW5 565 aaPredicted RBP7.82□□□□□ -1.16
SMG1-217ENST00000569764 TLDC2A0PJX2 215 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 GOLGA6L6A8MZA4 724 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 RNMTO43148 476 aaKnown RBP7.82□□□□□ -1.16
SMG1-217ENST00000569764 C1QTNF8P60827 252 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 CCT2P78371 535 aaKnown RBP7.82□□□□□ -1.16
SMG1-217ENST00000569764 AIMP1Q12904 312 aaKnown RBP7.82□□□□□ -1.16
SMG1-217ENST00000569764 STYK1Q6J9G0 422 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 CCDC102AQ96A19 550 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 RABL2BQ9UNT1 228 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 PCDHB15Q9Y5E8 787 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 LTN1O94822 1766 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 SLIT2O94813 1529 aa7.82□□□□□ -1.16
SMG1-217ENST00000569764 GLRX3O76003 335 aaKnown RBP7.81□□□□□ -1.16
SMG1-217ENST00000569764 ALDH1A1P00352 501 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 TNNT1P13805 278 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 CIAPIN1Q6FI81 312 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 ZNF804AQ7Z570 1209 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 ZSCAN30Q86W11 494 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 IL17RAQ96F46 866 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 EYA1Q99502 592 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 CCDC94Q9BW85 323 aaPredicted RBP7.81□□□□□ -1.16
SMG1-217ENST00000569764 GEMIN8Q9NWZ8 242 aaKnown RBP7.81□□□□□ -1.16
SMG1-217ENST00000569764 TNS2Q63HR2 1409 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 CASQ1P31415 396 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 DCAF15Q66K64 600 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 SUGP1Q8IWZ8 645 aaKnown RBP7.81□□□□□ -1.16
SMG1-217ENST00000569764 API5Q9BZZ5 524 aaKnown RBP7.81□□□□□ -1.16
SMG1-217ENST00000569764 SH3TC1Q8TE82 1336 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 MYO3BQ8WXR4 1341 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 ATICP31939 592 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 BRD3Q15059 726 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 PLEKHG6Q3KR16 790 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 ZNF408Q9H9D4 720 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 ELL2O00472 640 aaPredicted RBP7.81□□□□□ -1.16
SMG1-217ENST00000569764 FAM200BP0CF97 657 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 PDAP1Q13442 181 aaKnown RBP7.81□□□□□ -1.16
SMG1-217ENST00000569764 PARP9Q8IXQ6 854 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 VPS37AQ8NEZ2 397 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 PBXIP1Q96AQ6 731 aa7.81□□□□□ -1.16
SMG1-217ENST00000569764 CRKLP46109 303 aaKnown RBP7.8□□□□□ -1.16
SMG1-217ENST00000569764 KANK3Q6NY19 840 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 ATRIPQ8WXE1 791 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 PRKAG2Q9UGJ0 569 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 PRC1O43663 620 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 HOXB7P09629 217 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 ZNF853P0CG23 659 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 FKBP5Q13451 457 aaPredicted RBP7.8□□□□□ -1.16
SMG1-217ENST00000569764 ODR4Q5SWX8 454 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 CHADLQ6NUI6 762 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 MICALL1Q8N3F8 863 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 ARPC5LQ9BPX5 153 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 IFT57Q9NWB7 429 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 CARMIL3Q8ND23 1372 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 ANKRD18BA2A2Z9 1011 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 HSPA6P17066 643 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 SREBF2Q12772 1141 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 NOM1Q5C9Z4 860 aaKnown RBP7.8□□□□□ -1.16
SMG1-217ENST00000569764 MCM10Q7L590 875 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 C8orf58Q8NAV2 365 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 284.4 ms