RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 TCRBV5S4A2TA0A5A2 114 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 CASTP20810 708 aaKnown RBP13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 GPSM2P81274 684 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 FBXO33Q7Z6M2 555 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 HSPD1P10809 573 aaKnown RBP13.1□□□□□ -0.31
PDXDC1-216ENST00000569715 VPS37DQ86XT2 251 aa13.1□□□□□ -0.31
PDXDC1-216ENST00000569715 LRRFIP1Q32MZ4 808 aaKnown RBP13.1□□□□□ -0.31
PDXDC1-216ENST00000569715 LTBP1Q14766 1721 aa13.1□□□□□ -0.31
PDXDC1-216ENST00000569715 XDHP47989 1333 aa13.1□□□□□ -0.31
PDXDC1-216ENST00000569715 RPAP1Q9BWH6 1393 aaPredicted RBP13.1□□□□□ -0.31
PDXDC1-216ENST00000569715 MAGEB6Q8N7X4 407 aa13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 TTC14Q96N46 770 aa13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 GPAA1O43292 621 aa13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 CYP21A2P08686 494 aa13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 SRGNP10124 158 aa13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 ZKSCAN1P17029 563 aaPredicted RBP13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 CRAMP1Q96RY5 1269 aa13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 DSCC1Q9BVC3 393 aa13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 GNL3LQ9NVN8 582 aaKnown RBP13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
PDXDC1-216ENST00000569715 HIBADHP31937 336 aaKnown RBP13.08□□□□□ -0.31
PDXDC1-216ENST00000569715 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.31
PDXDC1-216ENST00000569715 ZSCAN25Q6NSZ9 544 aa13.08□□□□□ -0.31
PDXDC1-216ENST00000569715 OLFM4Q6UX06 510 aa13.08□□□□□ -0.31
PDXDC1-216ENST00000569715 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.31
PDXDC1-216ENST00000569715 NSFL1CQ9UNZ2 370 aaKnown RBP13.08□□□□□ -0.31
PDXDC1-216ENST00000569715 JAG2Q9Y219 1238 aa13.08□□□□□ -0.31
PDXDC1-216ENST00000569715 HSP90AA1P07900 732 aaKnown RBP13.08□□□□□ -0.32
PDXDC1-216ENST00000569715 DDIT3P35638 169 aa13.08□□□□□ -0.32
PDXDC1-216ENST00000569715 MAP3K12Q12852 859 aa13.08□□□□□ -0.32
PDXDC1-216ENST00000569715 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
PDXDC1-216ENST00000569715 ZSWIM6Q9HCJ5 1215 aa13.08□□□□□ -0.32
PDXDC1-216ENST00000569715 ABCF2Q9UG63 623 aa13.08□□□□□ -0.32
PDXDC1-216ENST00000569715 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 BBOX1O75936 387 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 TMX3Q96JJ7 454 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 LRP2BPQ9P2M1 347 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 LEMD3Q9Y2U8 911 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 UFL1O94874 794 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 AK2P54819 239 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 STOX1Q6ZVD7 989 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 TCEANC2Q96MN5 208 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 DENND2AQ9ULE3 1009 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 ADGRA1Q86SQ6 560 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 TM6SF1Q9BZW5 370 aa13.07□□□□□ -0.32
PDXDC1-216ENST00000569715 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 DUOX1Q9NRD9 1551 aa13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 NPR1P16066 1061 aa13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 PDE6BP35913 854 aa13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 TSGA10IPQ3SY00 556 aa13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 RUFY3Q7L099 469 aa13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 ZNF384Q8TF68 577 aa13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 ZGPATQ8N5A5 531 aaKnown RBP13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 CYP46A1Q9Y6A2 500 aa13.06□□□□□ -0.32
PDXDC1-216ENST00000569715 MBD4O95243 580 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 NBR1Q14596 966 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 PDRG1Q9NUG6 133 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 RAI14Q9P0K7 980 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 GGA1Q9UJY5 639 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 MIGA1Q8NAN2 632 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 ARMT1Q9H993 441 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 SEMA3EO15041 775 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 FGAP02671 866 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 HAND2P61296 217 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 TBC1D16Q8TBP0 767 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 AIDAQ96BJ3 306 aa13.05□□□□□ -0.32
PDXDC1-216ENST00000569715 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 MCM2P49736 904 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 LCORLQ8N3X6 602 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 STRBPQ96SI9 672 aaKnown RBP13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 ATP6V0A2Q9Y487 856 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 LARGE1O95461 756 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 CHRNA5P30532 468 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 MASTLQ96GX5 879 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 ANP32EQ9BTT0 268 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 PODXL2Q9NZ53 605 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 MAST2Q6P0Q8 1798 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 CYP7A1P22680 504 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 RPS6KB1P23443 525 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 ATP2B4P23634 1241 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 PRDX5P30044 214 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 SP8Q8IXZ3 490 aa13.04□□□□□ -0.32
PDXDC1-216ENST00000569715 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.324e-7■■□□□ 13.6
PDXDC1-216ENST00000569715 PSMA5P28066 241 aa13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 CCDC88AQ3V6T2 1871 aa13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 CHD4Q14839 1912 aa13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 PDS5AQ29RF7 1337 aaKnown RBP13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 PRKAB2O43741 272 aa13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 C15orf52Q6ZUT6 534 aaKnown RBP13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 ILDR1Q86SU0 546 aaPredicted RBP13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 NEK1Q96PY6 1258 aa13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 EPB41L4AQ9HCS5 686 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms