RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
TCF4-243ENST00000569357 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
TCF4-243ENST00000569357 SOX1O00570 391 aaPredicted RBP11.85□□□□□ -0.51
TCF4-243ENST00000569357 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
TCF4-243ENST00000569357 GJA5P36382 358 aa11.85□□□□□ -0.51
TCF4-243ENST00000569357 TAF1CQ15572 869 aaPredicted RBP11.85□□□□□ -0.51
TCF4-243ENST00000569357 PLBD2Q8NHP8 589 aa11.85□□□□□ -0.51
TCF4-243ENST00000569357 HTATIP2Q9BUP3 242 aa11.85□□□□□ -0.51
TCF4-243ENST00000569357 ZFYVE28Q9HCC9 887 aa11.85□□□□□ -0.51
TCF4-243ENST00000569357 NR2E3Q9Y5X4 410 aa11.85□□□□□ -0.51
TCF4-243ENST00000569357 IREB2P48200 963 aaKnown RBP11.84□□□□□ -0.51
TCF4-243ENST00000569357 KIF22Q14807 665 aa11.84□□□□□ -0.51
TCF4-243ENST00000569357 MAP3K11Q16584 847 aa11.84□□□□□ -0.51
TCF4-243ENST00000569357 CCDC152Q4G0S7 254 aa11.84□□□□□ -0.51
TCF4-243ENST00000569357 STRIP1Q5VSL9 837 aa11.84□□□□□ -0.51
TCF4-243ENST00000569357 ANKRD18AQ8IVF6 992 aa11.84□□□□□ -0.51
TCF4-243ENST00000569357 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
TCF4-243ENST00000569357 ELP3Q9H9T3 547 aa11.84□□□□□ -0.51
TCF4-243ENST00000569357 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
TCF4-243ENST00000569357 MAPK8IP3Q9UPT6 1336 aa11.84□□□□□ -0.51
TCF4-243ENST00000569357 MTFR1Q15390 333 aa11.83□□□□□ -0.52
TCF4-243ENST00000569357 DLGAP5Q15398 846 aa11.83□□□□□ -0.52
TCF4-243ENST00000569357 SUPT20HL1Q3ZLR7 823 aa11.83□□□□□ -0.52
TCF4-243ENST00000569357 TTLL5Q6EMB2 1281 aa11.83□□□□□ -0.52
TCF4-243ENST00000569357 JARID2Q92833 1246 aaPredicted RBP11.83□□□□□ -0.52
TCF4-243ENST00000569357 ARHGAP39Q9C0H5 1083 aa11.83□□□□□ -0.52
TCF4-243ENST00000569357 VEZTQ9HBM0 779 aa11.83□□□□□ -0.52
TCF4-243ENST00000569357 CLRN2A0PK11 232 aa11.82□□□□□ -0.52
TCF4-243ENST00000569357 HSP90B1P14625 803 aaKnown RBP11.82□□□□□ -0.52
TCF4-243ENST00000569357 KRT24Q2M2I5 525 aa11.82□□□□□ -0.52
TCF4-243ENST00000569357 NBPF12Q5TAG4 269 aaPredicted RBP11.82□□□□□ -0.52
TCF4-243ENST00000569357 ANKRD13AQ8IZ07 590 aa11.82□□□□□ -0.52
TCF4-243ENST00000569357 OPTNQ96CV9 577 aa11.82□□□□□ -0.52
TCF4-243ENST00000569357 SHISA4Q96DD7 197 aa11.82□□□□□ -0.52
TCF4-243ENST00000569357 PRO3102Q9H379 93 aa11.82□□□□□ -0.52
TCF4-243ENST00000569357 HTTP42858 3142 aa11.82□□□□□ -0.52
TCF4-243ENST00000569357 CCL15-CCL14A0A0B4J2E2 113 aa11.81□□□□□ -0.52
TCF4-243ENST00000569357 TESPA1A2RU30 521 aaPredicted RBP11.81□□□□□ -0.52
TCF4-243ENST00000569357 F8W031 263 aaPredicted RBP11.81□□□□□ -0.52
TCF4-243ENST00000569357 USP2O75604 605 aaPredicted RBP11.81□□□□□ -0.52
TCF4-243ENST00000569357 WDHD1O75717 1129 aaPredicted RBP11.81□□□□□ -0.52
TCF4-243ENST00000569357 GTF2IP78347 998 aa11.81□□□□□ -0.52
TCF4-243ENST00000569357 CCL15Q16663 113 aa11.81□□□□□ -0.52
TCF4-243ENST00000569357 RIC3Q7Z5B4 369 aa11.81□□□□□ -0.52
TCF4-243ENST00000569357 ZBTB38Q8NAP3 1195 aaPredicted RBP11.81□□□□□ -0.52
TCF4-243ENST00000569357 NKX2-3Q8TAU0 364 aa11.81□□□□□ -0.52
TCF4-243ENST00000569357 COL25A1Q9BXS0 654 aaPredicted RBP11.81□□□□□ -0.52
TCF4-243ENST00000569357 COA1Q9GZY4 146 aa11.81□□□□□ -0.52
TCF4-243ENST00000569357 MED23Q9ULK4 1368 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 UNCXA6NJT0 531 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 ZBTB7BO15156 539 aaPredicted RBP11.8□□□□□ -0.52
TCF4-243ENST00000569357 MYO1BO43795 1136 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 PDE8AO60658 829 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 MMP14P50281 582 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 CCT4P50991 539 aaKnown RBP11.8□□□□□ -0.52
TCF4-243ENST00000569357 HDGFL1Q5TGJ6 251 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 FAM43AQ8N2R8 423 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 BRI3BPQ8WY22 251 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 ZBED3Q96IU2 234 aaPredicted RBP11.8□□□□□ -0.52
TCF4-243ENST00000569357 MS4A4AQ96JQ5 239 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 BIN2Q9UBW5 565 aaPredicted RBP11.8□□□□□ -0.52
TCF4-243ENST00000569357 STAP2Q9UGK3 403 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
TCF4-243ENST00000569357 PCDHAC2Q9Y5I4 1007 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 PPP2R3BQ9Y5P8 575 aa11.8□□□□□ -0.52
TCF4-243ENST00000569357 SSC5DA1L4H1 1573 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 SZT2Q5T011 3432 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 COL1A1P02452 1464 aaPredicted RBP11.79□□□□□ -0.52
TCF4-243ENST00000569357 A0A1W2PPC1 479 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 EVI5O60447 810 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 RBM5P52756 815 aaKnown RBP eCLIP11.79□□□□□ -0.52
TCF4-243ENST00000569357 RIPK4P57078 832 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 IER5LQ5T953 404 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 Q7L0L9 218 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 TXNRD3Q86VQ6 643 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 MIER1Q8N108 512 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 DEFB123Q8N688 67 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
TCF4-243ENST00000569357 MYD88Q99836 296 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 RNF208Q9H0X6 261 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 CENPFP49454 3210 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 PSME4Q14997 1843 aa11.79□□□□□ -0.52
TCF4-243ENST00000569357 DLG5Q8TDM6 1919 aa11.78□□□□□ -0.52
TCF4-243ENST00000569357 BRCA2P51587 3418 aa11.78□□□□□ -0.52
TCF4-243ENST00000569357 FARP2O94887 1054 aaPredicted RBP11.78□□□□□ -0.52
TCF4-243ENST00000569357 GTF2A2P52657 109 aa11.78□□□□□ -0.52
TCF4-243ENST00000569357 LACTBP83111 547 aaPredicted RBP11.78□□□□□ -0.52
TCF4-243ENST00000569357 TRIM28Q13263 835 aaKnown RBP11.78□□□□□ -0.52
TCF4-243ENST00000569357 RAET1EQ8TD07 263 aa11.78□□□□□ -0.52
TCF4-243ENST00000569357 PNNQ9H307 717 aaKnown RBP11.78□□□□□ -0.52
TCF4-243ENST00000569357 DBF4Q9UBU7 674 aaPredicted RBP11.78□□□□□ -0.52
TCF4-243ENST00000569357 MINPP1Q9UNW1 487 aa11.78□□□□□ -0.52
TCF4-243ENST00000569357 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
TCF4-243ENST00000569357 CLSPNQ9HAW4 1339 aa11.78□□□□□ -0.52
TCF4-243ENST00000569357 CCL5P13501 91 aa11.77□□□□□ -0.53
TCF4-243ENST00000569357 GJA8P48165 433 aa11.77□□□□□ -0.53
TCF4-243ENST00000569357 RASA3Q14644 834 aa11.77□□□□□ -0.53
TCF4-243ENST00000569357 CFAP100Q494V2 611 aa11.77□□□□□ -0.53
TCF4-243ENST00000569357 BABAM1Q9NWV8 329 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms