RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 GPTP24298 496 aa13.47□□□□□ -0.25
LYRM1-210ENST00000568820 PARP10Q53GL7 1025 aa13.47□□□□□ -0.25
LYRM1-210ENST00000568820 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
LYRM1-210ENST00000568820 NEUROD6Q96NK8 337 aa13.47□□□□□ -0.25
LYRM1-210ENST00000568820 PHOX2BQ99453 314 aa13.47□□□□□ -0.25
LYRM1-210ENST00000568820 HAUS7Q99871 368 aa13.47□□□□□ -0.25
LYRM1-210ENST00000568820 SNRKQ9NRH2 765 aa13.47□□□□□ -0.25
LYRM1-210ENST00000568820 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.47□□□□□ -0.25
LYRM1-210ENST00000568820 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
LYRM1-210ENST00000568820 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
LYRM1-210ENST00000568820 IRS4O14654 1257 aaPredicted RBP13.46□□□□□ -0.26
LYRM1-210ENST00000568820 CTSWP56202 376 aa13.46□□□□□ -0.26
LYRM1-210ENST00000568820 SWT1Q5T5J6 900 aaKnown RBP13.46□□□□□ -0.26
LYRM1-210ENST00000568820 DBNDD2Q9BQY9 259 aa13.46□□□□□ -0.26
LYRM1-210ENST00000568820 ANKRD18BA2A2Z9 1011 aa13.45□□□□□ -0.26
LYRM1-210ENST00000568820 ZKSCAN1P17029 563 aaPredicted RBP13.45□□□□□ -0.26
LYRM1-210ENST00000568820 BCAMP50895 628 aa13.45□□□□□ -0.26
LYRM1-210ENST00000568820 MEX3CQ5U5Q3 659 aaKnown RBP13.45□□□□□ -0.26
LYRM1-210ENST00000568820 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.45□□□□□ -0.26
LYRM1-210ENST00000568820 IL25Q9H293 177 aa13.45□□□□□ -0.26
LYRM1-210ENST00000568820 ZNF609O15014 1411 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 LRRFIP1Q32MZ4 808 aaKnown RBP13.44□□□□□ -0.26
LYRM1-210ENST00000568820 LRRC24Q50LG9 513 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 CCDC158Q5M9N0 1113 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 RNF20Q5VTR2 975 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 ZNF594Q96JF6 807 aaPredicted RBP13.44□□□□□ -0.26
LYRM1-210ENST00000568820 GBP4Q96PP9 640 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 PALD1Q9ULE6 856 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 CCDC171Q6TFL3 1326 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.44□□□□□ -0.26
LYRM1-210ENST00000568820 A0A1B0GUL7 405 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 PTMSP20962 102 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 NUCB2P80303 420 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 NMIQ13287 307 aaPredicted RBP13.44□□□□□ -0.26
LYRM1-210ENST00000568820 ITPK1Q13572 414 aa13.44□□□□□ -0.26
LYRM1-210ENST00000568820 UTP14AQ9BVJ6 771 aaKnown RBP13.44□□□□□ -0.26
LYRM1-210ENST00000568820 ANKRD36CQ5JPF3 1778 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 SH3TC1Q8TE82 1336 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 ZNF831Q5JPB2 1677 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 KCNQ2O43526 872 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 ITGA6P23229 1130 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 KCNJ4P48050 445 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 TIMM10P62072 90 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 RAB3GAP1Q15042 981 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 GORABQ5T7V8 394 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 LDHAL6AQ6ZMR3 332 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 KBTBD3Q8NAB2 608 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 DNAJC2Q99543 621 aaKnown RBP13.43□□□□□ -0.26
LYRM1-210ENST00000568820 SNX14Q9Y5W7 946 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 RREB1Q92766 1687 aa13.43□□□□□ -0.26
LYRM1-210ENST00000568820 DDX11L8A8MPP1 907 aa13.42□□□□□ -0.26
LYRM1-210ENST00000568820 CAMTA2O94983 1202 aa13.42□□□□□ -0.26
LYRM1-210ENST00000568820 MCM4P33991 863 aa13.42□□□□□ -0.26
LYRM1-210ENST00000568820 MAP4K1Q92918 833 aa13.42□□□□□ -0.26
LYRM1-210ENST00000568820 KCNB2Q92953 911 aa13.42□□□□□ -0.26
LYRM1-210ENST00000568820 INTS4Q96HW7 963 aaKnown RBP13.42□□□□□ -0.26
LYRM1-210ENST00000568820 FAM227BQ96M60 508 aa13.42□□□□□ -0.26
LYRM1-210ENST00000568820 PUS3Q9BZE2 481 aaKnown RBP13.42□□□□□ -0.26
LYRM1-210ENST00000568820 TM6SF1Q9BZW5 370 aa13.42□□□□□ -0.26
LYRM1-210ENST00000568820 HCSTQ9UBK5 93 aa13.42□□□□□ -0.26
LYRM1-210ENST00000568820 UBN2Q6ZU65 1347 aa13.42□□□□□ -0.26
LYRM1-210ENST00000568820 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
LYRM1-210ENST00000568820 PSMA5P28066 241 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 METTL24Q5JXM2 366 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 SLF2Q8IX21 1173 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 GREM2Q9H772 168 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 CNNM1Q9NRU3 951 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 PAG1Q9NWQ8 432 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 HMG20BQ9P0W2 317 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 CNTNAP4Q9C0A0 1308 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 ABCC12Q96J65 1359 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 MED23Q9ULK4 1368 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 NUP98P52948 1817 aa13.41□□□□□ -0.26
LYRM1-210ENST00000568820 PTH1RQ03431 593 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 NECTIN1Q15223 517 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 TTC39AQ5SRH9 613 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 TMX3Q96JJ7 454 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
LYRM1-210ENST00000568820 RIPOR2Q9Y4F9 1068 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 A0A0D9SFI3 127 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 CUL4AQ13619 759 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 MCMDC2Q4G0Z9 681 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 RC3H1Q5TC82 1133 aaKnown RBP13.4□□□□□ -0.26
LYRM1-210ENST00000568820 SUSD4Q5VX71 490 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
LYRM1-210ENST00000568820 UPF3BQ9BZI7 483 aaKnown RBP13.4□□□□□ -0.26
LYRM1-210ENST00000568820 SLC24A3Q9HC58 644 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 HELLSQ9NRZ9 838 aa13.4□□□□□ -0.26
LYRM1-210ENST00000568820 TSR3Q9UJK0 312 aaKnown RBP13.4□□□□□ -0.26
LYRM1-210ENST00000568820 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
LYRM1-210ENST00000568820 RBM8AQ9Y5S9 174 aaKnown RBP13.4□□□□□ -0.26
LYRM1-210ENST00000568820 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
LYRM1-210ENST00000568820 GOLGA6L22H0YM25 854 aa13.39□□□□□ -0.27
LYRM1-210ENST00000568820 ATP2B3Q16720 1220 aa13.39□□□□□ -0.27
LYRM1-210ENST00000568820 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
LYRM1-210ENST00000568820 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
LYRM1-210ENST00000568820 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
LYRM1-210ENST00000568820 TNPO1Q92973 898 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms