RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 NCOA7Q8NI08 942 aa14.32□□□□□ -0.12
TMEM170A-205ENST00000568559 FBXO41Q8TF61 875 aa14.32□□□□□ -0.12
TMEM170A-205ENST00000568559 TMX3Q96JJ7 454 aa14.32□□□□□ -0.12
TMEM170A-205ENST00000568559 RNF41Q9H4P4 317 aaPredicted RBP14.32□□□□□ -0.12
TMEM170A-205ENST00000568559 PTH1RQ03431 593 aa14.31□□□□□ -0.12
TMEM170A-205ENST00000568559 MFSD6Q6ZSS7 791 aa14.31□□□□□ -0.12
TMEM170A-205ENST00000568559 ARMT1Q9H993 441 aa14.31□□□□□ -0.12
TMEM170A-205ENST00000568559 PES1O00541 588 aaKnown RBP14.31□□□□□ -0.12
TMEM170A-205ENST00000568559 CCDC82Q8N4S0 544 aa14.31□□□□□ -0.12
TMEM170A-205ENST00000568559 BRPF3Q9ULD4 1205 aa14.31□□□□□ -0.12
TMEM170A-205ENST00000568559 USP42Q9H9J4 1324 aaKnown RBP14.31□□□□□ -0.12
TMEM170A-205ENST00000568559 GRAPQ13588 217 aa14.31□□□□□ -0.12
TMEM170A-205ENST00000568559 GRAPLQ8TC17 118 aaPredicted RBP14.31□□□□□ -0.12
TMEM170A-205ENST00000568559 BRF1Q92994 677 aa14.31□□□□□ -0.12
TMEM170A-205ENST00000568559 IFIT3O14879 490 aaKnown RBP14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 RAB11FIP4Q86YS3 637 aa14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 SH2B1Q9NRF2 756 aaPredicted RBP14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 RIPOR2Q9Y4F9 1068 aa14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 CCT2P78371 535 aaKnown RBP14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 CHST3Q7LGC8 479 aa14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 TMOD2Q9NZR1 351 aa14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 SNX14Q9Y5W7 946 aa14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 SLC27A2O14975 620 aa14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 BBOX1O75936 387 aa14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 SNX21Q969T3 373 aa14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 MINPP1Q9UNW1 487 aa14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 DISP2A7MBM2 1401 aa14.3□□□□□ -0.12
TMEM170A-205ENST00000568559 LRP10Q7Z4F1 713 aa14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 ATP2B4P23634 1241 aa14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 WDR66Q8TBY9 1149 aa14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 XDHP47989 1333 aa14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 GNAT2P19087 354 aa14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 HSPA4P34932 840 aa14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 CASP7P55210 303 aa14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 EZH2Q15910 746 aaKnown RBP14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 PARP4Q9UKK3 1724 aaKnown RBP14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 PDE6AP16499 860 aa14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 MCM5P33992 734 aa14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 NECAB1Q8N987 351 aa14.29□□□□□ -0.12
TMEM170A-205ENST00000568559 PPEF1O14829 653 aaPredicted RBP14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 PRR5LQ6MZQ0 368 aa14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 IQCA1Q86XH1 822 aa14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 PALD1Q9ULE6 856 aa14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 AK2P54819 239 aa14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 SAFBQ15424 915 aaKnown RBP eCLIP14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 DEFB132Q7Z7B7 95 aa14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 ZNF444Q8N0Y2 327 aaPredicted RBP14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 SYAP1Q96A49 352 aaPredicted RBP14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 LEMD3Q9Y2U8 911 aa14.28□□□□□ -0.12
TMEM170A-205ENST00000568559 WDR33Q9C0J8 1336 aaKnown RBP14.27□□□□□ -0.12
TMEM170A-205ENST00000568559 SF3B3Q15393 1217 aaKnown RBP14.27□□□□□ -0.12
TMEM170A-205ENST00000568559 TMEM67Q5HYA8 995 aa14.27□□□□□ -0.12
TMEM170A-205ENST00000568559 Q6ZUG5 572 aa14.27□□□□□ -0.12
TMEM170A-205ENST00000568559 RNF214Q8ND24 703 aa14.27□□□□□ -0.12
TMEM170A-205ENST00000568559 ZNF287Q9HBT7 754 aa14.27□□□□□ -0.12
TMEM170A-205ENST00000568559 MCAMP43121 646 aa14.27□□□□□ -0.12
TMEM170A-205ENST00000568559 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.12
TMEM170A-205ENST00000568559 CRACR2BQ8N4Y2 399 aaPredicted RBP14.27□□□□□ -0.12
TMEM170A-205ENST00000568559 FAM208AQ9UK61 1670 aaKnown RBP14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 GOLGA8BA8MQT2 603 aa14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 RASGRF1Q13972 1273 aa14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 ZNF589Q86UQ0 364 aaPredicted RBP14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 CNKSR1Q969H4 720 aa14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 LRRC4BQ9NT99 713 aa14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 MCM9Q9NXL9 1143 aa14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 AATFQ9NY61 560 aaKnown RBP eCLIP14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 ECM2O94769 699 aaPredicted RBP14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 GTF2IP78347 998 aa14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 PICALMQ13492 652 aa14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 RUFY3Q7L099 469 aa14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 GPR101Q96P66 508 aaPredicted RBP14.27□□□□□ -0.13
TMEM170A-205ENST00000568559 MRC1P22897 1456 aa14.26□□□□□ -0.13
TMEM170A-205ENST00000568559 DOK7Q18PE1 504 aa14.26□□□□□ -0.13
TMEM170A-205ENST00000568559 SLC12A7Q9Y666 1083 aa14.26□□□□□ -0.13
TMEM170A-205ENST00000568559 GYS1P13807 737 aa14.26□□□□□ -0.13
TMEM170A-205ENST00000568559 PDE4BQ07343 736 aa14.26□□□□□ -0.13
TMEM170A-205ENST00000568559 LSG1Q9H089 658 aaKnown RBP14.26□□□□□ -0.13
TMEM170A-205ENST00000568559 TSPY2A6NKD2 308 aa14.26□□□□□ -0.13
TMEM170A-205ENST00000568559 SLFNL1Q499Z3 407 aa14.26□□□□□ -0.13
TMEM170A-205ENST00000568559 CCDC144CPQ8IYA2 1237 aa14.26□□□□□ -0.13
TMEM170A-205ENST00000568559 MPHOSPH10O00566 681 aaKnown RBP14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 NHSL1Q5SYE7 1610 aa14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 PRC1O43663 620 aa14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 HSPD1P10809 573 aaKnown RBP14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 NPR1P16066 1061 aa14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 XBP1P17861 261 aa14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 SKOR2Q2VWA4 1001 aaPredicted RBP14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 MFSD14BQ5SR56 506 aa14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 ZMYM1Q5SVZ6 1142 aa14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 DHX32Q7L7V1 743 aaKnown RBP14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 FERMT3Q86UX7 667 aa14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 MICU3Q86XE3 530 aa14.25□□□□□ -0.13
TMEM170A-205ENST00000568559 FIBPO43427 364 aa14.24□□□□□ -0.13
TMEM170A-205ENST00000568559 PRPF40AO75400 957 aaKnown RBP14.24□□□□□ -0.13
TMEM170A-205ENST00000568559 CDKL5O76039 1030 aa14.24□□□□□ -0.13
TMEM170A-205ENST00000568559 TTLL5Q6EMB2 1281 aa14.24□□□□□ -0.13
TMEM170A-205ENST00000568559 COL23A1Q86Y22 540 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms