RNA–Protein interactions for RNA: ENST00000567010.1

CDR2-205, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 2

Gene CDR2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-205ENST00000567010 DCTPP1Q9H773 170 aa6.41□□□□□ -1.38
CDR2-205ENST00000567010 SEC31BQ9NQW1 1179 aa6.41□□□□□ -1.38
CDR2-205ENST00000567010 PPP1R1BQ9UD71 204 aaPredicted RBP6.41□□□□□ -1.38
CDR2-205ENST00000567010 CDHR2Q9BYE9 1310 aa6.41□□□□□ -1.38
CDR2-205ENST00000567010 TNS1Q9HBL0 1735 aaKnown RBP6.41□□□□□ -1.38
CDR2-205ENST00000567010 TAF1LQ8IZX4 1826 aa6.41□□□□□ -1.38
CDR2-205ENST00000567010 COL5A3P25940 1745 aaPredicted RBP6.4□□□□□ -1.38
CDR2-205ENST00000567010 APBB1O00213 710 aa6.4□□□□□ -1.38
CDR2-205ENST00000567010 ITGA6P23229 1130 aa6.4□□□□□ -1.38
CDR2-205ENST00000567010 SLC4A3P48751 1232 aa6.4□□□□□ -1.38
CDR2-205ENST00000567010 CTSWP56202 376 aa6.4□□□□□ -1.38
CDR2-205ENST00000567010 RPS8P62241 208 aaKnown RBP6.4□□□□□ -1.38
CDR2-205ENST00000567010 HDAC1Q13547 482 aaPredicted RBP6.4□□□□□ -1.38
CDR2-205ENST00000567010 RABL6Q3YEC7 729 aaPredicted RBP6.4□□□□□ -1.38
CDR2-205ENST00000567010 SWT1Q5T5J6 900 aaKnown RBP6.4□□□□□ -1.38
CDR2-205ENST00000567010 ANKRD45Q5TZF3 282 aa6.4□□□□□ -1.38
CDR2-205ENST00000567010 DDX46Q7L014 1031 aaKnown RBP6.4□□□□□ -1.38
CDR2-205ENST00000567010 C2CD5Q86YS7 1000 aa6.4□□□□□ -1.38
CDR2-205ENST00000567010 KLHDC4Q8TBB5 520 aa6.4□□□□□ -1.38
CDR2-205ENST00000567010 SSH3Q8TE77 659 aa6.4□□□□□ -1.38
CDR2-205ENST00000567010 ZNF622Q969S3 477 aaKnown RBP eCLIP6.4□□□□□ -1.38
CDR2-205ENST00000567010 RBM17Q96I25 401 aaKnown RBP6.4□□□□□ -1.38
CDR2-205ENST00000567010 SIL1Q9H173 461 aa6.4□□□□□ -1.38
CDR2-205ENST00000567010 SPON1Q9HCB6 807 aa6.4□□□□□ -1.38
CDR2-205ENST00000567010 PA2G4Q9UQ80 394 aaKnown RBP6.4□□□□□ -1.38
CDR2-205ENST00000567010 CARMIL3Q8ND23 1372 aa6.4□□□□□ -1.39
CDR2-205ENST00000567010 LAMB4A4D0S4 1761 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 NUP98P52948 1817 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 A0A0G2JLW4 131 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 KLRG2A4D1S0 409 aaPredicted RBP6.39□□□□□ -1.39
CDR2-205ENST00000567010 DDX11L8A8MPP1 907 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 BBOX1O75936 387 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 ALDH1B1P30837 517 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 RFX5P48382 616 aaPredicted RBP6.39□□□□□ -1.39
CDR2-205ENST00000567010 PTPN12Q05209 780 aaKnown RBP6.39□□□□□ -1.39
CDR2-205ENST00000567010 OS9Q13438 667 aaPredicted RBP6.39□□□□□ -1.39
CDR2-205ENST00000567010 MTX1Q13505 466 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 SKIV2LQ15477 1246 aaKnown RBP6.39□□□□□ -1.39
CDR2-205ENST00000567010 LDHAL6AQ6ZMR3 332 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 ERICH6Q7L0X2 663 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 SLF2Q8IX21 1173 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 RPGRQ92834 1020 aaKnown RBP6.39□□□□□ -1.39
CDR2-205ENST00000567010 MPHOSPH8Q99549 860 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 PUS3Q9BZE2 481 aaKnown RBP6.39□□□□□ -1.39
CDR2-205ENST00000567010 COPRSQ9NQ92 184 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 CNNM1Q9NRU3 951 aa6.39□□□□□ -1.39
CDR2-205ENST00000567010 IBTKQ9P2D0 1353 aaPredicted RBP6.39□□□□□ -1.39
CDR2-205ENST00000567010 SMARCA5O60264 1052 aaPredicted RBP6.38□□□□□ -1.39
CDR2-205ENST00000567010 RAB11FIP3O75154 756 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 CHRNA5P30532 468 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 GJA5P36382 358 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 IGHMBP2P38935 993 aaKnown RBP6.38□□□□□ -1.39
CDR2-205ENST00000567010 TGFB2P61812 414 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 LRRC24Q50LG9 513 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 HSP90AB4PQ58FF6 505 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 ANKRD18AQ8IVF6 992 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 C16orf71Q8IYS4 520 aaPredicted RBP6.38□□□□□ -1.39
CDR2-205ENST00000567010 CELF1Q92879 486 aaKnown RBP6.38□□□□□ -1.39
CDR2-205ENST00000567010 GCC1Q96CN9 775 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 MASTLQ96GX5 879 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 ZFRQ96KR1 1074 aaKnown RBP6.38□□□□□ -1.39
CDR2-205ENST00000567010 CRAMP1Q96RY5 1269 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 EXOC6BQ9Y2D4 811 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 NOP58Q9Y2X3 529 aaKnown RBP6.38□□□□□ -1.39
CDR2-205ENST00000567010 RIPOR2Q9Y4F9 1068 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 RREB1Q92766 1687 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 UBR3Q6ZT12 1888 aa6.38□□□□□ -1.39
CDR2-205ENST00000567010 PXDNLA1KZ92 1463 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 EYA2O00167 538 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 SASH1O94885 1247 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 SRGNP10124 158 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 NPR1P16066 1061 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 DPEP1P16444 411 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 HOXA10P31260 410 aaPredicted RBP6.37□□□□□ -1.39
CDR2-205ENST00000567010 IL15P40933 162 aaPredicted RBP6.37□□□□□ -1.39
CDR2-205ENST00000567010 TIMM10P62072 90 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 TFCP2Q12800 502 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 TUSC1Q2TAM9 212 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 MYSM1Q5VVJ2 828 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 CENPQQ7L2Z9 268 aaPredicted RBP6.37□□□□□ -1.39
CDR2-205ENST00000567010 SAMD7Q7Z3H4 446 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 SMC5Q8IY18 1101 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 HELBQ8NG08 1087 aaPredicted RBP6.37□□□□□ -1.39
CDR2-205ENST00000567010 SPIRE2Q8WWL2 714 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 PCMTD1Q96MG8 357 aaPredicted RBP6.37□□□□□ -1.39
CDR2-205ENST00000567010 NEUROD6Q96NK8 337 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 CDC5LQ99459 802 aaKnown RBP6.37□□□□□ -1.39
CDR2-205ENST00000567010 TBC1D2Q9BYX2 928 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 TMX4Q9H1E5 349 aaPredicted RBP6.37□□□□□ -1.39
CDR2-205ENST00000567010 CEP126Q9P2H0 1117 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 MINPP1Q9UNW1 487 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 PDZRN3Q9UPQ7 1066 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 CD2APQ9Y5K6 639 aa6.37□□□□□ -1.39
CDR2-205ENST00000567010 CICQ96RK0 1608 aaPredicted RBP6.36□□□□□ -1.39
CDR2-205ENST00000567010 ABCC12Q96J65 1359 aa6.36□□□□□ -1.39
CDR2-205ENST00000567010 TAF5LO75529 589 aa6.36□□□□□ -1.39
CDR2-205ENST00000567010 SLC10A3P09131 477 aa6.36□□□□□ -1.39
CDR2-205ENST00000567010 KCNA3P22001 575 aa6.36□□□□□ -1.39
CDR2-205ENST00000567010 GCGRP47871 477 aa6.36□□□□□ -1.39
CDR2-205ENST00000567010 USP46P62068 366 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms