RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
PDXDC1-214ENST00000566633 PNPLA7Q6ZV29 1317 aa12.86□□□□□ -0.35
PDXDC1-214ENST00000566633 ZSCAN22P10073 491 aaPredicted RBP12.86□□□□□ -0.35
PDXDC1-214ENST00000566633 CAMKK2Q96RR4 588 aa12.86□□□□□ -0.35
PDXDC1-214ENST00000566633 SMC3Q9UQE7 1217 aa12.86□□□□□ -0.35
PDXDC1-214ENST00000566633 STX6O43752 255 aa12.86□□□□□ -0.35
PDXDC1-214ENST00000566633 PSMA5P28066 241 aa12.86□□□□□ -0.35
PDXDC1-214ENST00000566633 UBR3Q6ZT12 1888 aa12.86□□□□□ -0.35
PDXDC1-214ENST00000566633 TSGA10IPQ3SY00 556 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 RNF20Q5VTR2 975 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 USP48Q86UV5 1035 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 PPP1R9BQ96SB3 815 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 RBSNQ9H1K0 784 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 HMG20BQ9P0W2 317 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 MMP10P09238 476 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 ST5P78524 1137 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 RASGRF1Q13972 1273 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 COL9A3Q14050 684 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 ME3Q16798 604 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 CCDC83Q8IWF9 413 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 TAF6LQ9Y6J9 622 aa12.85□□□□□ -0.35
PDXDC1-214ENST00000566633 CCDC173Q0VFZ6 552 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 ST3GAL1Q11201 340 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 LRSAM1Q6UWE0 723 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 GPR101Q96P66 508 aaPredicted RBP12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 ALDH8A1Q9H2A2 487 aaPredicted RBP12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 PIH1D3Q9NQM4 214 aaKnown RBP12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 TPCN1Q9ULQ1 816 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 SRCAPQ6ZRS2 3230 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 GADD45BO75293 160 aaPredicted RBP12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 GJB2P29033 226 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 WASHC4Q2M389 1173 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 MCMDC2Q4G0Z9 681 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 TXNRD3Q86VQ6 643 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 RPGRQ92834 1020 aaKnown RBP12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 OSBP2Q969R2 916 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 RFX7Q2KHR2 1363 aa12.84□□□□□ -0.35
PDXDC1-214ENST00000566633 SYCE3A1L190 88 aa12.83□□□□□ -0.35
PDXDC1-214ENST00000566633 SLC15A2Q16348 729 aa12.83□□□□□ -0.35
PDXDC1-214ENST00000566633 NLGN1Q8N2Q7 840 aa12.83□□□□□ -0.35
PDXDC1-214ENST00000566633 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.83□□□□□ -0.35
PDXDC1-214ENST00000566633 JAG2Q9Y219 1238 aa12.83□□□□□ -0.35
PDXDC1-214ENST00000566633 M0R2C6 588 aa12.83□□□□□ -0.36
PDXDC1-214ENST00000566633 RNF113AO15541 343 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-214ENST00000566633 F13A1P00488 732 aa12.83□□□□□ -0.36
PDXDC1-214ENST00000566633 SPATA5Q8NB90 893 aa12.83□□□□□ -0.36
PDXDC1-214ENST00000566633 PUS7LQ9H0K6 701 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-214ENST00000566633 ANKIB1Q9P2G1 1089 aa12.83□□□□□ -0.36
PDXDC1-214ENST00000566633 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 ARID4AP29374 1257 aaPredicted RBP12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 SLC9C2Q5TAH2 1124 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 BLOC1S2Q6QNY1 142 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 VPS37DQ86XT2 251 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 NECAB1Q8N987 351 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 ANP32BQ92688 251 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 TRIM44Q96DX7 344 aaPredicted RBP12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 A0A0G2JLW4 131 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 GRAPQ13588 217 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 ANKRD1Q15327 319 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 GRAPLQ8TC17 118 aaPredicted RBP12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 MTMR6Q9Y217 621 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 CNPY2Q9Y2B0 182 aa12.82□□□□□ -0.36
PDXDC1-214ENST00000566633 TNRC6CQ9HCJ0 1690 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 ESPNB1AK53 854 aa12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 CLCN1P35523 988 aa12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 ZMYM1Q5SVZ6 1142 aa12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 OLFM4Q6UX06 510 aa12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 FAM84BQ96KN1 310 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 ATP6V1DQ9Y5K8 247 aa12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 LRP5O75197 1615 aa12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 MAST3O60307 1309 aa12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 TCHHQ07283 1943 aa12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 TOB2Q14106 344 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 SYAP1Q96A49 352 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 ABCF2Q9UG63 623 aa12.81□□□□□ -0.36
PDXDC1-214ENST00000566633 DTNBO60941 627 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 UQCRFS1P1P0C7P4 283 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 UBE4AQ14139 1066 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 CRY2Q49AN0 593 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 STK32BQ9NY57 414 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 COL24A1Q17RW2 1714 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 KRT32Q14532 448 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 CAVIN4Q5BKX8 364 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 ZNF512BQ96KM6 892 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 TCEANC2Q96MN5 208 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 PARP3Q9Y6F1 533 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 ZNF804BA4D1E1 1349 aa12.8□□□□□ -0.36
PDXDC1-214ENST00000566633 TTLL5Q6EMB2 1281 aa12.79□□□□□ -0.36
PDXDC1-214ENST00000566633 FLAD1Q8NFF5 587 aa12.79□□□□□ -0.36
PDXDC1-214ENST00000566633 U3KPZ7 1027 aaPredicted RBP12.79□□□□□ -0.36
PDXDC1-214ENST00000566633 ZNF532Q9HCE3 1301 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms