RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 TM6SF1Q9BZW5 370 aa13.57□□□□□ -0.24
LINC00562-201ENST00000566385 CYP46A1Q9Y6A2 500 aa13.57□□□□□ -0.24
LINC00562-201ENST00000566385 U3KPZ7 1027 aaPredicted RBP13.57□□□□□ -0.24
LINC00562-201ENST00000566385 DOCK2Q92608 1830 aa13.57□□□□□ -0.24
LINC00562-201ENST00000566385 TSGA10IPQ3SY00 556 aa13.57□□□□□ -0.24
LINC00562-201ENST00000566385 MAGEB6Q8N7X4 407 aa13.57□□□□□ -0.24
LINC00562-201ENST00000566385 GPR101Q96P66 508 aaPredicted RBP13.57□□□□□ -0.24
LINC00562-201ENST00000566385 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC00562-201ENST00000566385 PDRG1Q9NUG6 133 aa13.57□□□□□ -0.24
LINC00562-201ENST00000566385 MCM2P49736 904 aa13.56□□□□□ -0.24
LINC00562-201ENST00000566385 CUL4AQ13619 759 aa13.56□□□□□ -0.24
LINC00562-201ENST00000566385 RPGRQ92834 1020 aaKnown RBP13.56□□□□□ -0.24
LINC00562-201ENST00000566385 FGAP02671 866 aa13.56□□□□□ -0.24
LINC00562-201ENST00000566385 LRRFIP1Q32MZ4 808 aaKnown RBP13.56□□□□□ -0.24
LINC00562-201ENST00000566385 CAVIN4Q5BKX8 364 aa13.56□□□□□ -0.24
LINC00562-201ENST00000566385 VPS37DQ86XT2 251 aa13.56□□□□□ -0.24
LINC00562-201ENST00000566385 CAMKK2Q96RR4 588 aa13.56□□□□□ -0.24
LINC00562-201ENST00000566385 ANKIB1Q9P2G1 1089 aa13.56□□□□□ -0.24
LINC00562-201ENST00000566385 ABCF2Q9UG63 623 aa13.56□□□□□ -0.24
LINC00562-201ENST00000566385 HAND2P61296 217 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 UBE3CQ15386 1083 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 FBXO33Q7Z6M2 555 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 NLGN1Q8N2Q7 840 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 JAG2Q9Y219 1238 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 ANKRD31Q8N7Z5 1873 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 LAMA4Q16363 1823 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 MMP10P09238 476 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 BLOC1S2Q6QNY1 142 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 ADGRA1Q86SQ6 560 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 TNPO1Q92973 898 aaKnown RBP13.55□□□□□ -0.24
LINC00562-201ENST00000566385 PDGFDQ9GZP0 370 aaPredicted RBP13.55□□□□□ -0.24
LINC00562-201ENST00000566385 ANKRD2Q9GZV1 360 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 IRS2Q9Y4H2 1338 aa13.55□□□□□ -0.24
LINC00562-201ENST00000566385 RPS6KB1P23443 525 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 DEFB132Q7Z7B7 95 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 NEK1Q96PY6 1258 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 LRRC2Q9BYS8 371 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 LRP2BPQ9P2M1 347 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 PSMA5P28066 241 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 MAP3K12Q12852 859 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 TOB2Q14106 344 aaPredicted RBP13.54□□□□□ -0.24
LINC00562-201ENST00000566385 RAB3GAP1Q15042 981 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 ZSCAN25Q6NSZ9 544 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 TPCN1Q9ULQ1 816 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 SRCAPQ6ZRS2 3230 aa13.54□□□□□ -0.24
LINC00562-201ENST00000566385 KLRG2A4D1S0 409 aaPredicted RBP13.53□□□□□ -0.24
LINC00562-201ENST00000566385 HIBADHP31937 336 aaKnown RBP13.53□□□□□ -0.24
LINC00562-201ENST00000566385 GPSM2P81274 684 aa13.53□□□□□ -0.24
LINC00562-201ENST00000566385 ME3Q16798 604 aa13.53□□□□□ -0.24
LINC00562-201ENST00000566385 MIGA1Q8NAN2 632 aa13.53□□□□□ -0.24
LINC00562-201ENST00000566385 ZNF384Q8TF68 577 aa13.53□□□□□ -0.24
LINC00562-201ENST00000566385 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
LINC00562-201ENST00000566385 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
LINC00562-201ENST00000566385 E7EWF7 191 aa13.53□□□□□ -0.24
LINC00562-201ENST00000566385 ST3GAL1Q11201 340 aa13.53□□□□□ -0.24
LINC00562-201ENST00000566385 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
LINC00562-201ENST00000566385 STRBPQ96SI9 672 aaKnown RBP13.53□□□□□ -0.24
LINC00562-201ENST00000566385 ARMT1Q9H993 441 aa13.53□□□□□ -0.24
LINC00562-201ENST00000566385 SLC15A2Q16348 729 aa13.52□□□□□ -0.24
LINC00562-201ENST00000566385 CHST3Q7LGC8 479 aa13.52□□□□□ -0.24
LINC00562-201ENST00000566385 NECAB1Q8N987 351 aa13.52□□□□□ -0.24
LINC00562-201ENST00000566385 NKX2-3Q8TAU0 364 aa13.52□□□□□ -0.24
LINC00562-201ENST00000566385 GNL3LQ9NVN8 582 aaKnown RBP13.52□□□□□ -0.24
LINC00562-201ENST00000566385 DENND2AQ9ULE3 1009 aa13.52□□□□□ -0.24
LINC00562-201ENST00000566385 ZDHHC9Q9Y397 364 aa13.52□□□□□ -0.24
LINC00562-201ENST00000566385 PRKAB2O43741 272 aa13.52□□□□□ -0.25
LINC00562-201ENST00000566385 MBD4O95243 580 aa13.52□□□□□ -0.25
LINC00562-201ENST00000566385 HOXA10P31260 410 aaPredicted RBP13.52□□□□□ -0.25
LINC00562-201ENST00000566385 AIDAQ96BJ3 306 aa13.52□□□□□ -0.25
LINC00562-201ENST00000566385 RBM17Q96I25 401 aaKnown RBP13.52□□□□□ -0.25
LINC00562-201ENST00000566385 RGPD3A6NKT7 1758 aaPredicted RBP13.52□□□□□ -0.25
LINC00562-201ENST00000566385 RGPD4Q7Z3J3 1758 aa13.52□□□□□ -0.25
LINC00562-201ENST00000566385 NRXN2Q9P2S2 1712 aa13.52□□□□□ -0.25
LINC00562-201ENST00000566385 MYH13Q9UKX3 1938 aa13.52□□□□□ -0.25
LINC00562-201ENST00000566385 APPP05067 770 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 KRT32Q14532 448 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 LCORLQ8N3X6 602 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 FLAD1Q8NFF5 587 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 NBPF3Q9H094 633 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 RAI14Q9P0K7 980 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 XDHP47989 1333 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 CACNA1SQ13698 1873 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 SRGNP10124 158 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 CHAF1AQ13111 956 aaPredicted RBP13.51□□□□□ -0.25
LINC00562-201ENST00000566385 FOXD4L5Q5VV16 416 aaPredicted RBP13.51□□□□□ -0.25
LINC00562-201ENST00000566385 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 FOXD4L4Q8WXT5 416 aaPredicted RBP13.51□□□□□ -0.25
LINC00562-201ENST00000566385 INTS4Q96HW7 963 aaKnown RBP13.51□□□□□ -0.25
LINC00562-201ENST00000566385 CHAMP1Q96JM3 812 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 BRIP1Q9BX63 1249 aa13.51□□□□□ -0.25
LINC00562-201ENST00000566385 CWC22Q9HCG8 908 aaKnown RBP13.51□□□□□ -0.25
LINC00562-201ENST00000566385 HMGB2P26583 209 aaKnown RBP13.5□□□□□ -0.25
LINC00562-201ENST00000566385 PRDX5P30044 214 aa13.5□□□□□ -0.25
LINC00562-201ENST00000566385 Q6ZUG5 572 aa13.5□□□□□ -0.25
LINC00562-201ENST00000566385 EPB41L4AQ9HCS5 686 aaPredicted RBP13.5□□□□□ -0.25
LINC00562-201ENST00000566385 PARP3Q9Y6F1 533 aa13.5□□□□□ -0.25
LINC00562-201ENST00000566385 CYP7A1P22680 504 aa13.5□□□□□ -0.25
LINC00562-201ENST00000566385 INCENPQ9NQS7 918 aa13.5□□□□□ -0.25
LINC00562-201ENST00000566385 POLLQ9UGP5 575 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms