RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 NAT10Q9H0A0 1025 aaKnown RBP12.8□□□□□ -0.36
TCF4-232ENST00000566286 VRTNQ9H8Y1 702 aa12.8□□□□□ -0.36
TCF4-232ENST00000566286 CCDC69A6NI79 296 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 RNMTO43148 476 aaKnown RBP12.79□□□□□ -0.36
TCF4-232ENST00000566286 ATP5JP18859 108 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 DHX8Q14562 1220 aaKnown RBP12.79□□□□□ -0.36
TCF4-232ENST00000566286 PROSER3Q2NL68 480 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 SLFNL1Q499Z3 407 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 CEP57L1Q8IYX8 460 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 KRT222Q8N1A0 295 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 ZNF396Q96N95 335 aaPredicted RBP12.79□□□□□ -0.36
TCF4-232ENST00000566286 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
TCF4-232ENST00000566286 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.79□□□□□ -0.36
TCF4-232ENST00000566286 RGPD5Q99666 1765 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 PFKFB2O60825 505 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 ABL2P42684 1182 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 FAM160A1Q05DH4 1040 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 LRRC59Q96AG4 307 aaKnown RBP12.79□□□□□ -0.36
TCF4-232ENST00000566286 CHMP4CQ96CF2 233 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 SIL1Q9H173 461 aa12.79□□□□□ -0.36
TCF4-232ENST00000566286 DDX21Q9NR30 783 aaKnown RBP eCLIP12.79□□□□□ -0.36
TCF4-232ENST00000566286 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
TCF4-232ENST00000566286 GRXCR2A6NFK2 248 aa12.78□□□□□ -0.36
TCF4-232ENST00000566286 ADD1P35611 737 aaKnown RBP12.78□□□□□ -0.36
TCF4-232ENST00000566286 CCZ1BP86790 482 aa12.78□□□□□ -0.36
TCF4-232ENST00000566286 CCZ1P86791 482 aaPredicted RBP12.78□□□□□ -0.36
TCF4-232ENST00000566286 FGD1P98174 961 aa12.78□□□□□ -0.36
TCF4-232ENST00000566286 HIC1Q14526 733 aa12.78□□□□□ -0.36
TCF4-232ENST00000566286 IMPACTQ9P2X3 320 aa12.78□□□□□ -0.36
TCF4-232ENST00000566286 FAM193AP78312 1265 aa12.77□□□□□ -0.36
TCF4-232ENST00000566286 NEXNQ0ZGT2 675 aa12.77□□□□□ -0.36
TCF4-232ENST00000566286 SCRN1Q12765 414 aa12.77□□□□□ -0.36
TCF4-232ENST00000566286 DHX40Q8IX18 779 aaKnown RBP12.77□□□□□ -0.36
TCF4-232ENST00000566286 CCAR2Q8N163 923 aaKnown RBP12.77□□□□□ -0.36
TCF4-232ENST00000566286 SREK1Q8WXA9 508 aaKnown RBP12.77□□□□□ -0.36
TCF4-232ENST00000566286 DDX11Q96FC9 970 aa12.77□□□□□ -0.36
TCF4-232ENST00000566286 ZNF215Q9UL58 517 aaPredicted RBP12.77□□□□□ -0.36
TCF4-232ENST00000566286 SIPA1L3O60292 1781 aaPredicted RBP12.77□□□□□ -0.37
TCF4-232ENST00000566286 USP27XA6NNY8 438 aa12.77□□□□□ -0.37
TCF4-232ENST00000566286 SLU7O95391 586 aaKnown RBP12.77□□□□□ -0.37
TCF4-232ENST00000566286 TUBB4AP04350 444 aa12.77□□□□□ -0.37
TCF4-232ENST00000566286 SNW1Q13573 536 aaKnown RBP12.77□□□□□ -0.37
TCF4-232ENST00000566286 NAA30Q147X3 362 aaPredicted RBP12.77□□□□□ -0.37
TCF4-232ENST00000566286 MCMDC2Q4G0Z9 681 aa12.77□□□□□ -0.37
TCF4-232ENST00000566286 FILIP1Q7Z7B0 1213 aa12.77□□□□□ -0.37
TCF4-232ENST00000566286 BANK1Q8NDB2 785 aa12.77□□□□□ -0.37
TCF4-232ENST00000566286 DDX17Q92841 729 aaKnown RBP12.77□□□□□ -0.37
TCF4-232ENST00000566286 COL15A1P39059 1388 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 CYP21A2P08686 494 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 TCF3P15923 654 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 CEBPZQ03701 1054 aaKnown RBP12.76□□□□□ -0.37
TCF4-232ENST00000566286 NSUN7Q8NE18 718 aaKnown RBP12.76□□□□□ -0.37
TCF4-232ENST00000566286 ENGASEQ8NFI3 743 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 ANKRD24Q8TF21 1146 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 OSBPL5Q9H0X9 879 aaPredicted RBP12.76□□□□□ -0.37
TCF4-232ENST00000566286 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 USP16Q9Y5T5 823 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 LAMA4Q16363 1823 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 PXDNQ92626 1479 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 NRDCO43847 1150 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 RFC5P40937 340 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 ARID5BQ14865 1188 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 PPP1R15BQ5SWA1 713 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 DHX32Q7L7V1 743 aaKnown RBP12.76□□□□□ -0.37
TCF4-232ENST00000566286 RIC3Q7Z5B4 369 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 ANKRD13AQ8IZ07 590 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 GOLPH3LQ9H4A5 285 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 ZNF609O15014 1411 aa12.76□□□□□ -0.37
TCF4-232ENST00000566286 PTPDC1A2A3K4 754 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 IGKV5-2P06315 115 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 SLFN14P0C7P3 912 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 KCNJ6P48051 423 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 TNNI3KQ59H18 835 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 TICAM2Q86XR7 235 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 CREBRFQ8IUR6 639 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 CCDC150Q8NCX0 1101 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 USP28Q96RU2 1077 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 DBNLQ9UJU6 430 aaKnown RBP12.75□□□□□ -0.37
TCF4-232ENST00000566286 FPGT-TNNI3KV9GXZ4 949 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 COL18A1P39060 1754 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 SH3TC1Q8TE82 1336 aa12.75□□□□□ -0.37
TCF4-232ENST00000566286 TNS3Q68CZ2 1445 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 TERF2Q15554 542 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 ZRSR1Q15695 479 aaKnown RBP12.74□□□□□ -0.37
TCF4-232ENST00000566286 AOPEPQ8N6M6 819 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 FSIP1Q8NA03 581 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 MTMR14Q8NCE2 650 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 EDC3Q96F86 508 aaKnown RBP12.74□□□□□ -0.37
TCF4-232ENST00000566286 BPIFA3Q9BQP9 254 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 AGXT2Q9BYV1 514 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 FAM53CQ9NYF3 392 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 NEURL1BA8MQ27 555 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 ME1P48163 572 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 AIMP1Q12904 312 aaKnown RBP12.74□□□□□ -0.37
TCF4-232ENST00000566286 GCKRQ14397 625 aa12.74□□□□□ -0.37
TCF4-232ENST00000566286 KLHDC4Q8TBB5 520 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms