RNA–Protein interactions for RNA: ENST00000565982.1

TM6SF1-208, Transcript of transmembrane 6 superfamily member 1, human

TSL 3

Gene TM6SF1, Length 856 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM6SF1-208	ENST00000565982	ZGPAT	Q8N5A5	531 aa	Known RBP	32.95	■■■□□ 2.87
TM6SF1-208	ENST00000565982	SNRK	Q9NRH2	765 aa		32.95	■■■□□ 2.87
TM6SF1-208	ENST00000565982	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.95	■■■□□ 2.87
TM6SF1-208	ENST00000565982	ARHGAP27	Q6ZUM4	889 aa		32.94	■■■□□ 2.86
TM6SF1-208	ENST00000565982	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	32.94	■■■□□ 2.86
TM6SF1-208	ENST00000565982	FER1L6	Q2WGJ9	1857 aa		32.93	■■■□□ 2.86
TM6SF1-208	ENST00000565982	DOK7	Q18PE1	504 aa		32.93	■■■□□ 2.86
TM6SF1-208	ENST00000565982	KBTBD3	Q8NAB2	608 aa		32.93	■■■□□ 2.86
TM6SF1-208	ENST00000565982	TBC1D22A	Q8WUA7	517 aa		32.93	■■■□□ 2.86
TM6SF1-208	ENST00000565982	HIP1	O00291	1037 aa		32.92	■■■□□ 2.86
TM6SF1-208	ENST00000565982	ECE2	O60344	883 aa		32.92	■■■□□ 2.86
TM6SF1-208	ENST00000565982	MAP4K4	O95819	1239 aa	Predicted RBP	32.92	■■■□□ 2.86
TM6SF1-208	ENST00000565982	NIM1K	Q8IY84	436 aa		32.92	■■■□□ 2.86
TM6SF1-208	ENST00000565982	JDP2	Q8WYK2	163 aa		32.92	■■■□□ 2.86
TM6SF1-208	ENST00000565982	FAM205A	Q6ZU69	1335 aa		32.92	■■■□□ 2.86
TM6SF1-208	ENST00000565982	CYP2E1	P05181	493 aa	Predicted RBP	32.91	■■■□□ 2.86
TM6SF1-208	ENST00000565982	SPTY2D1	Q68D10	685 aa	Predicted RBP	32.91	■■■□□ 2.86
TM6SF1-208	ENST00000565982	CASC1	Q6TDU7	716 aa		32.91	■■■□□ 2.86
TM6SF1-208	ENST00000565982	FSD1	Q9BTV5	496 aa		32.91	■■■□□ 2.86
TM6SF1-208	ENST00000565982	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	32.91	■■■□□ 2.86
TM6SF1-208	ENST00000565982	SALL1	Q9NSC2	1324 aa		32.91	■■■□□ 2.86
TM6SF1-208	ENST00000565982	RFX7	Q2KHR2	1363 aa		32.91	■■■□□ 2.86
TM6SF1-208	ENST00000565982	GRIN3B	O60391	1043 aa		32.9	■■■□□ 2.86
TM6SF1-208	ENST00000565982	GPR162	Q16538	588 aa		32.9	■■■□□ 2.86
TM6SF1-208	ENST00000565982	ZSCAN25	Q6NSZ9	544 aa		32.9	■■■□□ 2.86
TM6SF1-208	ENST00000565982	TMED8	Q6PL24	325 aa	Predicted RBP	32.9	■■■□□ 2.86
TM6SF1-208	ENST00000565982	PI16	Q6UXB8	463 aa		32.9	■■■□□ 2.86
TM6SF1-208	ENST00000565982	DBNDD1	Q9H9R9	158 aa		32.9	■■■□□ 2.86
TM6SF1-208	ENST00000565982	CHAF1A	Q13111	956 aa	Predicted RBP	32.89	■■■□□ 2.86
TM6SF1-208	ENST00000565982	CDC45	O75419	566 aa		32.88	■■■□□ 2.85
TM6SF1-208	ENST00000565982	YBX3	P16989	372 aa	Known RBP eCLIP	32.88	■■■□□ 2.85
TM6SF1-208	ENST00000565982	ZNRF3	Q9ULT6	936 aa		32.88	■■■□□ 2.85
TM6SF1-208	ENST00000565982	NDUFB9	Q9Y6M9	179 aa		32.88	■■■□□ 2.85
TM6SF1-208	ENST00000565982	EIF5B	O60841	1220 aa	Known RBP	32.87	■■■□□ 2.85
TM6SF1-208	ENST00000565982	ZFY	P08048	801 aa	Predicted RBP	32.87	■■■□□ 2.85
TM6SF1-208	ENST00000565982	MAP3K12	Q12852	859 aa		32.87	■■■□□ 2.85
TM6SF1-208	ENST00000565982	LRP2BP	Q9P2M1	347 aa		32.87	■■■□□ 2.85
TM6SF1-208	ENST00000565982	LMNB1	P20700	586 aa		32.86	■■■□□ 2.85
TM6SF1-208	ENST00000565982	FKBP1A	P62942	108 aa	Known RBP	32.86	■■■□□ 2.85
TM6SF1-208	ENST00000565982	STRIP1	Q5VSL9	837 aa		32.86	■■■□□ 2.85
TM6SF1-208	ENST00000565982	TTLL5	Q6EMB2	1281 aa		32.86	■■■□□ 2.85
TM6SF1-208	ENST00000565982	EDC3	Q96F86	508 aa	Known RBP	32.86	■■■□□ 2.85
TM6SF1-208	ENST00000565982	ANTXR1	Q9H6X2	564 aa		32.86	■■■□□ 2.85
TM6SF1-208	ENST00000565982	SUGT1	Q9Y2Z0	365 aa		32.86	■■■□□ 2.85
TM6SF1-208	ENST00000565982	AKAP11	Q9UKA4	1901 aa		32.85	■■■□□ 2.85
TM6SF1-208	ENST00000565982	USP17L3	A6NCW0	530 aa		32.85	■■■□□ 2.85
TM6SF1-208	ENST00000565982	USP17L4	A6NCW7	530 aa		32.85	■■■□□ 2.85
TM6SF1-208	ENST00000565982	GTF2I	P78347	998 aa		32.85	■■■□□ 2.85
TM6SF1-208	ENST00000565982	RASSF7	Q02833	373 aa		32.85	■■■□□ 2.85
TM6SF1-208	ENST00000565982	USP17L1	Q7RTZ2	530 aa		32.85	■■■□□ 2.85
TM6SF1-208	ENST00000565982	COL1A1	P02452	1464 aa	Predicted RBP	32.85	■■■□□ 2.85
TM6SF1-208	ENST00000565982	PIH1D3	Q9NQM4	214 aa	Known RBP	32.84	■■■□□ 2.85
TM6SF1-208	ENST00000565982	ABCF2	Q9UG63	623 aa		32.84	■■■□□ 2.85
TM6SF1-208	ENST00000565982	IDH1	O75874	414 aa	Known RBP	32.83	■■■□□ 2.85
TM6SF1-208	ENST00000565982	ERICH6	Q7L0X2	663 aa		32.83	■■■□□ 2.85
TM6SF1-208	ENST00000565982	DIAPH3	Q9NSV4	1193 aa		32.83	■■■□□ 2.85
TM6SF1-208	ENST00000565982	TBC1D9	Q6ZT07	1266 aa		32.82	■■■□□ 2.84
TM6SF1-208	ENST00000565982	RUFY2	Q8WXA3	655 aa		32.82	■■■□□ 2.84
TM6SF1-208	ENST00000565982	LDHB	P07195	334 aa	Known RBP	32.81	■■■□□ 2.84
TM6SF1-208	ENST00000565982	MFSD14B	Q5SR56	506 aa		32.81	■■■□□ 2.84
TM6SF1-208	ENST00000565982	FBXW7	Q969H0	707 aa		32.81	■■■□□ 2.84
TM6SF1-208	ENST00000565982	RAI14	Q9P0K7	980 aa		32.8	■■■□□ 2.84
TM6SF1-208	ENST00000565982	MYO3B	Q8WXR4	1341 aa		32.79	■■■□□ 2.84
TM6SF1-208	ENST00000565982	MYH13	Q9UKX3	1938 aa		32.79	■■■□□ 2.84
TM6SF1-208	ENST00000565982	RNF113A	O15541	343 aa	Known RBP	32.79	■■■□□ 2.84
TM6SF1-208	ENST00000565982	CHML	P26374	656 aa		32.79	■■■□□ 2.84
TM6SF1-208	ENST00000565982	TNIP1	Q15025	636 aa		32.79	■■■□□ 2.84
TM6SF1-208	ENST00000565982	DCAF8L1	A6NGE4	600 aa		32.78	■■■□□ 2.84
TM6SF1-208	ENST00000565982	YDJC	A8MPS7	323 aa		32.78	■■■□□ 2.84
TM6SF1-208	ENST00000565982	UBE3C	Q15386	1083 aa		32.78	■■■□□ 2.84
TM6SF1-208	ENST00000565982	SLC9C2	Q5TAH2	1124 aa		32.78	■■■□□ 2.84
TM6SF1-208	ENST00000565982	EIF6	P56537	245 aa	Known RBP	32.77	■■■□□ 2.84
TM6SF1-208	ENST00000565982	GSTO1	P78417	241 aa		32.77	■■■□□ 2.84
TM6SF1-208	ENST00000565982	DACT2	Q5SW24	774 aa		32.77	■■■□□ 2.84
TM6SF1-208	ENST00000565982	SLF2	Q8IX21	1173 aa		32.77	■■■□□ 2.84
TM6SF1-208	ENST00000565982	JAG2	Q9Y219	1238 aa		32.77	■■■□□ 2.84
TM6SF1-208	ENST00000565982	MAST3	O60307	1309 aa		32.77	■■■□□ 2.84
TM6SF1-208	ENST00000565982	ADD2	P35612	726 aa		32.76	■■■□□ 2.83
TM6SF1-208	ENST00000565982	DZIP1	Q86YF9	867 aa	Known RBP	32.76	■■■□□ 2.83
TM6SF1-208	ENST00000565982	FZD9	O00144	591 aa		32.75	■■■□□ 2.83
TM6SF1-208	ENST00000565982	VIL1	P09327	827 aa	Known RBP	32.75	■■■□□ 2.83
TM6SF1-208	ENST00000565982	PDE6A	P16499	860 aa		32.75	■■■□□ 2.83
TM6SF1-208	ENST00000565982	CIAPIN1	Q6FI81	312 aa		32.75	■■■□□ 2.83
TM6SF1-208	ENST00000565982	NAA16	Q6N069	864 aa	Predicted RBP	32.74	■■■□□ 2.83
TM6SF1-208	ENST00000565982	HELLS	Q9NRZ9	838 aa		32.74	■■■□□ 2.83
TM6SF1-208	ENST00000565982	RAD50	Q92878	1312 aa		32.74	■■■□□ 2.83
TM6SF1-208	ENST00000565982	AK9	Q5TCS8	1911 aa		32.73	■■■□□ 2.83
TM6SF1-208	ENST00000565982	LDHC	P07864	332 aa		32.73	■■■□□ 2.83
TM6SF1-208	ENST00000565982	PRDX5	P30044	214 aa		32.73	■■■□□ 2.83
TM6SF1-208	ENST00000565982	MAGEB6	Q8N7X4	407 aa		32.73	■■■□□ 2.83
TM6SF1-208	ENST00000565982	APPBP2	Q92624	585 aa		32.73	■■■□□ 2.83
TM6SF1-208	ENST00000565982	KCNQ5	Q9NR82	932 aa		32.73	■■■□□ 2.83
TM6SF1-208	ENST00000565982	COL4A5	P29400	1685 aa		32.72	■■■□□ 2.83
TM6SF1-208	ENST00000565982	RAD17	O75943	681 aa		32.72	■■■□□ 2.83
TM6SF1-208	ENST00000565982	MMP14	P50281	582 aa		32.72	■■■□□ 2.83
TM6SF1-208	ENST00000565982	PRELP	P51888	382 aa		32.72	■■■□□ 2.83
TM6SF1-208	ENST00000565982	MFAP1	P55081	439 aa	Known RBP	32.72	■■■□□ 2.83
TM6SF1-208	ENST00000565982	MECOM	Q03112	1051 aa		32.72	■■■□□ 2.83
TM6SF1-208	ENST00000565982	CXCL9	Q07325	125 aa		32.72	■■■□□ 2.83
TM6SF1-208	ENST00000565982	C8orf34	Q49A92	452 aa		32.72	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms