RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 ZAP70P43403 619 aa9.15□□□□□ -0.94
CHD9-214ENST00000565119 PAOXQ6QHF9 649 aa9.15□□□□□ -0.94
CHD9-214ENST00000565119 FNBP4Q8N3X1 1017 aaPredicted RBP9.15□□□□□ -0.94
CHD9-214ENST00000565119 SMG8Q8ND04 991 aaKnown RBP9.15□□□□□ -0.94
CHD9-214ENST00000565119 AGBL5Q8NDL9 886 aa9.15□□□□□ -0.94
CHD9-214ENST00000565119 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
CHD9-214ENST00000565119 FBLIM1Q8WUP2 373 aa9.14□□□□□ -0.95
CHD9-214ENST00000565119 SUGCTQ9HAC7 445 aa9.14□□□□□ -0.95
CHD9-214ENST00000565119 KANSL3Q9P2N6 904 aa9.14□□□□□ -0.95
CHD9-214ENST00000565119 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
CHD9-214ENST00000565119 FAM170BA6NMN3 283 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 DBX1A6NMT0 343 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 DLGAP3O95886 979 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 DRD2P14416 443 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 C19orf57Q0VDD7 668 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 ZAR1Q86SH2 424 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 HHIPQ96QV1 700 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 KRTAP4-5Q9BYR2 181 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 TMEM63CQ9P1W3 806 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 PRKAG2Q9UGJ0 569 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 SOX13Q9UN79 622 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 CARMIL2Q6F5E8 1435 aa9.13□□□□□ -0.95
CHD9-214ENST00000565119 KRTAP9-7A8MTY7 169 aa9.12□□□□□ -0.95
CHD9-214ENST00000565119 CAPN12Q6ZSI9 719 aa9.12□□□□□ -0.95
CHD9-214ENST00000565119 GATA6Q92908 595 aa9.12□□□□□ -0.95
CHD9-214ENST00000565119 TBC1D32Q96NH3 1257 aa9.12□□□□□ -0.95
CHD9-214ENST00000565119 CNTN3Q9P232 1028 aa9.12□□□□□ -0.95
CHD9-214ENST00000565119 SALL4Q9UJQ4 1053 aa9.12□□□□□ -0.95
CHD9-214ENST00000565119 ZBTB39O15060 712 aa9.11□□□□□ -0.95
CHD9-214ENST00000565119 PRMT3O60678 531 aa9.11□□□□□ -0.95
CHD9-214ENST00000565119 TRPA1O75762 1119 aa9.11□□□□□ -0.95
CHD9-214ENST00000565119 USP11P51784 963 aa9.11□□□□□ -0.95
CHD9-214ENST00000565119 OCLNQ16625 522 aa9.11□□□□□ -0.95
CHD9-214ENST00000565119 ELP3Q9H9T3 547 aa9.11□□□□□ -0.95
CHD9-214ENST00000565119 DZANK1Q9NVP4 752 aa9.11□□□□□ -0.95
CHD9-214ENST00000565119 LOC100289279A0A1B0GTE1 492 aa9.1□□□□□ -0.95
CHD9-214ENST00000565119 PDE2AO00408 941 aaPredicted RBP9.1□□□□□ -0.95
CHD9-214ENST00000565119 ARL4DP49703 201 aa9.1□□□□□ -0.95
CHD9-214ENST00000565119 TPRNQ4KMQ1 711 aa9.1□□□□□ -0.95
CHD9-214ENST00000565119 CALR3Q96L12 384 aaKnown RBP9.1□□□□□ -0.95
CHD9-214ENST00000565119 USP26Q9BXU7 913 aa9.1□□□□□ -0.95
CHD9-214ENST00000565119 CYP4F12Q9HCS2 524 aa9.1□□□□□ -0.95
CHD9-214ENST00000565119 ZC3H7BQ9UGR2 993 aaKnown RBP9.1□□□□□ -0.95
CHD9-214ENST00000565119 SOX1O00570 391 aaPredicted RBP9.09□□□□□ -0.95
CHD9-214ENST00000565119 C2CD4AQ8NCU7 369 aaPredicted RBP9.09□□□□□ -0.95
CHD9-214ENST00000565119 CLUAP1Q96AJ1 413 aa9.09□□□□□ -0.95
CHD9-214ENST00000565119 PROSER2Q86WR7 435 aaPredicted RBP9.08□□□□□ -0.96
CHD9-214ENST00000565119 EZH1Q92800 747 aaPredicted RBP9.08□□□□□ -0.96
CHD9-214ENST00000565119 NAA30Q147X3 362 aaPredicted RBP9.07□□□□□ -0.96
CHD9-214ENST00000565119 PDE12Q6L8Q7 609 aaKnown RBP9.07□□□□□ -0.96
CHD9-214ENST00000565119 WFDC3Q8IUB2 231 aa9.07□□□□□ -0.96
CHD9-214ENST00000565119 LRRC4CQ9HCJ2 640 aa9.07□□□□□ -0.96
CHD9-214ENST00000565119 CDCA8Q53HL2 280 aa9.06□□□□□ -0.96
CHD9-214ENST00000565119 ZNF574Q6ZN55 896 aaPredicted RBP9.06□□□□□ -0.96
CHD9-214ENST00000565119 VN1R5Q7Z5H4 357 aa9.06□□□□□ -0.96
CHD9-214ENST00000565119 MKNK1Q9BUB5 465 aa9.06□□□□□ -0.96
CHD9-214ENST00000565119 NOVA2Q9UNW9 492 aaKnown RBP9.06□□□□□ -0.96
CHD9-214ENST00000565119 IKBKEQ14164 716 aa9.05□□□□□ -0.96
CHD9-214ENST00000565119 SWI5Q1ZZU3 235 aa9.05□□□□□ -0.96
CHD9-214ENST00000565119 ZNF792Q3KQV3 632 aa9.05□□□□□ -0.96
CHD9-214ENST00000565119 C1orf127Q8N9H9 656 aa9.05□□□□□ -0.96
CHD9-214ENST00000565119 BCL7CQ8WUZ0 217 aaPredicted RBP9.05□□□□□ -0.96
CHD9-214ENST00000565119 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
CHD9-214ENST00000565119 FARP2O94887 1054 aaPredicted RBP9.04□□□□□ -0.96
CHD9-214ENST00000565119 SOX4Q06945 474 aaPredicted RBP9.04□□□□□ -0.96
CHD9-214ENST00000565119 PLCL1Q15111 1095 aa9.04□□□□□ -0.96
CHD9-214ENST00000565119 EXOSC6Q5RKV6 272 aaKnown RBP9.04□□□□□ -0.96
CHD9-214ENST00000565119 CFAP70Q5T0N1 1121 aa9.04□□□□□ -0.96
CHD9-214ENST00000565119 ZNF438Q7Z4V0 828 aa9.04□□□□□ -0.96
CHD9-214ENST00000565119 TMEM102Q8N9M5 508 aaPredicted RBP9.04□□□□□ -0.96
CHD9-214ENST00000565119 CCER1Q8TC90 406 aaPredicted RBP9.04□□□□□ -0.96
CHD9-214ENST00000565119 NUDT16Q96DE0 195 aaKnown RBP9.04□□□□□ -0.96
CHD9-214ENST00000565119 STIM2Q9P246 746 aa9.04□□□□□ -0.96
CHD9-214ENST00000565119 BIN1O00499 593 aa9.03□□□□□ -0.96
CHD9-214ENST00000565119 CES1P23141 567 aa9.03□□□□□ -0.96
CHD9-214ENST00000565119 FAM69CQ0P6D2 419 aa9.03□□□□□ -0.96
CHD9-214ENST00000565119 DUSP27Q5VZP5 1158 aa9.03□□□□□ -0.96
CHD9-214ENST00000565119 ZNF765Q7L2R6 523 aa9.03□□□□□ -0.96
CHD9-214ENST00000565119 SPRED2Q7Z698 418 aa9.03□□□□□ -0.96
CHD9-214ENST00000565119 SLC5A6Q9Y289 635 aa9.03□□□□□ -0.96
CHD9-214ENST00000565119 RFX1P22670 979 aa9.02□□□□□ -0.97
CHD9-214ENST00000565119 TMEM132AQ24JP5 1023 aa9.02□□□□□ -0.97
CHD9-214ENST00000565119 BSNDQ8WZ55 320 aa9.02□□□□□ -0.97
CHD9-214ENST00000565119 NXPE3Q969Y0 559 aa9.02□□□□□ -0.97
CHD9-214ENST00000565119 NFICP08651 508 aa9.01□□□□□ -0.97
CHD9-214ENST00000565119 YIPF2Q9BWQ6 316 aa9.01□□□□□ -0.97
CHD9-214ENST00000565119 PKN1Q16512 942 aa9□□□□□ -0.97
CHD9-214ENST00000565119 SOX17Q9H6I2 414 aaPredicted RBP9□□□□□ -0.97
CHD9-214ENST00000565119 CXXC1Q9P0U4 656 aaPredicted RBP9□□□□□ -0.97
CHD9-214ENST00000565119 CYP27A1Q02318 531 aa8.99□□□□□ -0.97
CHD9-214ENST00000565119 ATCAYQ86WG3 371 aa8.99□□□□□ -0.97
CHD9-214ENST00000565119 ABTB2Q8N961 1025 aa8.99□□□□□ -0.97
CHD9-214ENST00000565119 OSMRQ99650 979 aa8.99□□□□□ -0.97
CHD9-214ENST00000565119 CHRDQ9H2X0 955 aa8.99□□□□□ -0.97
CHD9-214ENST00000565119 ACTL7BQ9Y614 415 aa8.99□□□□□ -0.97
CHD9-214ENST00000565119 ADH5P11766 374 aa8.98□□□□□ -0.97
CHD9-214ENST00000565119 XKR5Q6UX68 686 aa8.98□□□□□ -0.97
CHD9-214ENST00000565119 ATG4DQ86TL0 474 aaPredicted RBP8.98□□□□□ -0.97
CHD9-214ENST00000565119 KSR1Q8IVT5 923 aa8.98□□□□□ -0.97
CHD9-214ENST00000565119 GLIS3Q8NEA6 775 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms