RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 BTG4Q9NY30 223 aa18.89■□□□□ 0.61
LINC00554-201ENST00000564841 LRRC37A3O60309 1634 aa18.89■□□□□ 0.61
LINC00554-201ENST00000564841 A0A0D9SFI3 127 aa18.89■□□□□ 0.61
LINC00554-201ENST00000564841 SECISBP2LQ93073 1101 aaKnown RBP18.89■□□□□ 0.61
LINC00554-201ENST00000564841 A0A1B0GVL5 298 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 KINO60870 393 aaKnown RBP18.88■□□□□ 0.61
LINC00554-201ENST00000564841 LMOD1P29536 600 aaPredicted RBP18.88■□□□□ 0.61
LINC00554-201ENST00000564841 ADD1P35611 737 aaKnown RBP18.88■□□□□ 0.61
LINC00554-201ENST00000564841 GSDMDP57764 484 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 SKIDA1Q1XH10 827 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 CEP57L1Q8IYX8 460 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 FSIP1Q8NA03 581 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 RUFY2Q8WXA3 655 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 UTP14AQ9BVJ6 771 aaKnown RBP18.88■□□□□ 0.61
LINC00554-201ENST00000564841 PLEKHA4Q9H4M7 779 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 EFCC1Q9HA90 598 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 ANO10Q9NW15 660 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 DCCP43146 1447 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 ATP1A3P13637 1013 aa18.88■□□□□ 0.61
LINC00554-201ENST00000564841 GLRX3O76003 335 aaKnown RBP18.87■□□□□ 0.61
LINC00554-201ENST00000564841 ADAMTS2O95450 1211 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 HOXB7P09629 217 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 DDX21Q9NR30 783 aaKnown RBP eCLIP18.87■□□□□ 0.61
LINC00554-201ENST00000564841 PARP3Q9Y6F1 533 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 ALS2Q96Q42 1657 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 RPS6KB1P23443 525 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 ME1P48163 572 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 MAP4K1Q92918 833 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 SDF4Q9BRK5 362 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 HSP90B1P14625 803 aaKnown RBP18.87■□□□□ 0.61
LINC00554-201ENST00000564841 GPS2Q13227 327 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 SART3Q15020 963 aaKnown RBP18.87■□□□□ 0.61
LINC00554-201ENST00000564841 CCDC73Q6ZRK6 1079 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 ZNF589Q86UQ0 364 aaPredicted RBP18.87■□□□□ 0.61
LINC00554-201ENST00000564841 PACS2Q86VP3 889 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 FBXO18Q8NFZ0 1043 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 EAF2Q96CJ1 260 aaPredicted RBP18.87■□□□□ 0.61
LINC00554-201ENST00000564841 SUCLG2Q96I99 432 aa18.87■□□□□ 0.61
LINC00554-201ENST00000564841 WDR17Q8IZU2 1322 aa18.86■□□□□ 0.61
LINC00554-201ENST00000564841 DDX58O95786 925 aaKnown RBP18.86■□□□□ 0.61
LINC00554-201ENST00000564841 CAVIN2O95810 425 aa18.86■□□□□ 0.61
LINC00554-201ENST00000564841 PDIA6Q15084 440 aa18.86■□□□□ 0.61
LINC00554-201ENST00000564841 KCNB2Q92953 911 aa18.86■□□□□ 0.61
LINC00554-201ENST00000564841 DRC1Q96MC2 740 aa18.86■□□□□ 0.61
LINC00554-201ENST00000564841 WDR24Q96S15 920 aa18.86■□□□□ 0.61
LINC00554-201ENST00000564841 PARD6BQ9BYG5 372 aa18.86■□□□□ 0.61
LINC00554-201ENST00000564841 BICC1Q9H694 974 aaKnown RBP18.86■□□□□ 0.61
LINC00554-201ENST00000564841 KCND1Q9NSA2 647 aa18.86■□□□□ 0.61
LINC00554-201ENST00000564841 FAM208AQ9UK61 1670 aaKnown RBP18.86■□□□□ 0.61
LINC00554-201ENST00000564841 SOS2Q07890 1332 aaPredicted RBP18.86■□□□□ 0.61
LINC00554-201ENST00000564841 PSDA5PKW4 1024 aaPredicted RBP18.85■□□□□ 0.61
LINC00554-201ENST00000564841 N4BP1O75113 896 aaKnown RBP18.85■□□□□ 0.61
LINC00554-201ENST00000564841 PIP4K2BP78356 416 aa18.85■□□□□ 0.61
LINC00554-201ENST00000564841 DPF2Q92785 391 aa18.85■□□□□ 0.61
LINC00554-201ENST00000564841 FUT8Q9BYC5 575 aa18.85■□□□□ 0.61
LINC00554-201ENST00000564841 SNRPA1P09661 255 aaKnown RBP18.85■□□□□ 0.61
LINC00554-201ENST00000564841 HSP90AA4PQ58FG1 418 aa18.85■□□□□ 0.61
LINC00554-201ENST00000564841 WWC2Q6AWC2 1192 aa18.85■□□□□ 0.61
LINC00554-201ENST00000564841 ENGASEQ8NFI3 743 aa18.85■□□□□ 0.61
LINC00554-201ENST00000564841 SUGCTQ9HAC7 445 aa18.85■□□□□ 0.61
LINC00554-201ENST00000564841 ECHDC1Q9NTX5 307 aa18.85■□□□□ 0.61
LINC00554-201ENST00000564841 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
LINC00554-201ENST00000564841 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
LINC00554-201ENST00000564841 A1BGP04217 495 aa18.84■□□□□ 0.61
LINC00554-201ENST00000564841 IL2RBP14784 551 aa18.84■□□□□ 0.61
LINC00554-201ENST00000564841 MCM6Q14566 821 aa18.84■□□□□ 0.61
LINC00554-201ENST00000564841 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
LINC00554-201ENST00000564841 VPS18Q9P253 973 aa18.84■□□□□ 0.61
LINC00554-201ENST00000564841 ICE2Q659A1 982 aa18.84■□□□□ 0.61
LINC00554-201ENST00000564841 CCDC129Q6ZRS4 1044 aa18.84■□□□□ 0.61
LINC00554-201ENST00000564841 FSD1Q9BTV5 496 aa18.84■□□□□ 0.61
LINC00554-201ENST00000564841 STRCQ7RTU9 1775 aa18.84■□□□□ 0.61
LINC00554-201ENST00000564841 CFAP45Q9UL16 551 aa18.84■□□□□ 0.61
LINC00554-201ENST00000564841 SASH1O94885 1247 aa18.83■□□□□ 0.61
LINC00554-201ENST00000564841 PSMA5P28066 241 aa18.83■□□□□ 0.61
LINC00554-201ENST00000564841 NEXNQ0ZGT2 675 aa18.83■□□□□ 0.61
LINC00554-201ENST00000564841 E2F4Q16254 413 aa18.83■□□□□ 0.61
LINC00554-201ENST00000564841 CAMTA1Q9Y6Y1 1673 aa18.83■□□□□ 0.6
LINC00554-201ENST00000564841 EFCAB8A8MWE9 144 aa18.83■□□□□ 0.6
LINC00554-201ENST00000564841 GOLGA5Q8TBA6 731 aa18.83■□□□□ 0.6
LINC00554-201ENST00000564841 PHACTR2O75167 634 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 CCDC158Q5M9N0 1113 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 ANKRD13DQ6ZTN6 518 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 GPATCH11Q8N954 259 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 ZBTB3Q9H5J0 574 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 PDE11AQ9HCR9 933 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 ARFGAP3Q9NP61 516 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 NCAPD2Q15021 1401 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 GRM8O00222 908 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 IGKV5-2P06315 115 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 PRR29P0C7W0 189 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 CCT2P78371 535 aaKnown RBP18.82■□□□□ 0.6
LINC00554-201ENST00000564841 LRRFIP1Q32MZ4 808 aaKnown RBP18.82■□□□□ 0.6
LINC00554-201ENST00000564841 Q6ZUG5 572 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 CCDC150Q8NCX0 1101 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 NDUFA8P51970 172 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 FAM160A1Q05DH4 1040 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 SCRN1Q12765 414 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 TSGA10IPQ3SY00 556 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 KAZALD1Q96I82 304 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms