RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 ZNF827Q17R98 1081 aa30.06■■■□□ 2.4
LINC01003-201ENST00000564834 GRAPLQ8TC17 118 aaPredicted RBP30.06■■■□□ 2.4
LINC01003-201ENST00000564834 ZSCAN31Q96LW9 406 aaPredicted RBP30.06■■■□□ 2.4
LINC01003-201ENST00000564834 NEK1Q96PY6 1258 aa30.06■■■□□ 2.4
LINC01003-201ENST00000564834 TFCP2L1Q9NZI6 479 aa30.06■■■□□ 2.4
LINC01003-201ENST00000564834 ANKRD1Q15327 319 aa30.05■■■□□ 2.4
LINC01003-201ENST00000564834 SH2B1Q9NRF2 756 aaPredicted RBP30.05■■■□□ 2.4
LINC01003-201ENST00000564834 WWC3Q9ULE0 1092 aa30.05■■■□□ 2.4
LINC01003-201ENST00000564834 ZNF532Q9HCE3 1301 aa30.05■■■□□ 2.4
LINC01003-201ENST00000564834 TCRBV5S4A2TA0A5A2 114 aa30.05■■■□□ 2.4
LINC01003-201ENST00000564834 CTNNA3Q9UI47 895 aa30.05■■■□□ 2.4
LINC01003-201ENST00000564834 FOXP2O15409 715 aa30.04■■■□□ 2.4
LINC01003-201ENST00000564834 GYG1P46976 350 aa30.04■■■□□ 2.4
LINC01003-201ENST00000564834 CRY2Q49AN0 593 aa30.04■■■□□ 2.4
LINC01003-201ENST00000564834 POLRMTO00411 1230 aaKnown RBP30.03■■■□□ 2.4
LINC01003-201ENST00000564834 GBP4Q96PP9 640 aa30.03■■■□□ 2.4
LINC01003-201ENST00000564834 HMGB1P09429 215 aaKnown RBP30.03■■■□□ 2.4
LINC01003-201ENST00000564834 DDR1Q08345 913 aa30.03■■■□□ 2.4
LINC01003-201ENST00000564834 COL9A3Q14050 684 aaPredicted RBP30.03■■■□□ 2.4
LINC01003-201ENST00000564834 FAM84BQ96KN1 310 aaPredicted RBP30.03■■■□□ 2.4
LINC01003-201ENST00000564834 WTIPA6NIX2 430 aaPredicted RBP30.02■■■□□ 2.4
LINC01003-201ENST00000564834 VPS37DQ86XT2 251 aa30.02■■■□□ 2.4
LINC01003-201ENST00000564834 CLEC17AQ6ZS10 378 aa30.01■■■□□ 2.39
LINC01003-201ENST00000564834 FLAD1Q8NFF5 587 aa30.01■■■□□ 2.39
LINC01003-201ENST00000564834 RPGRQ92834 1020 aaKnown RBP30.01■■■□□ 2.39
LINC01003-201ENST00000564834 STOX1Q6ZVD7 989 aa30■■■□□ 2.39
LINC01003-201ENST00000564834 FBXO33Q7Z6M2 555 aa30■■■□□ 2.39
LINC01003-201ENST00000564834 LARP6Q9BRS8 491 aaKnown RBP30■■■□□ 2.39
LINC01003-201ENST00000564834 SEMA3EO15041 775 aa30■■■□□ 2.39
LINC01003-201ENST00000564834 MAGEB6Q8N7X4 407 aa30■■■□□ 2.39
LINC01003-201ENST00000564834 DENND2AQ9ULE3 1009 aa30■■■□□ 2.39
LINC01003-201ENST00000564834 ZSCAN21Q9Y5A6 473 aaPredicted RBP30■■■□□ 2.39
LINC01003-201ENST00000564834 COL1A1P02452 1464 aaPredicted RBP30■■■□□ 2.39
LINC01003-201ENST00000564834 NRXN2Q9P2S2 1712 aa29.99■■■□□ 2.39
LINC01003-201ENST00000564834 DDX11L8A8MPP1 907 aa29.99■■■□□ 2.39
LINC01003-201ENST00000564834 LARGE1O95461 756 aa29.99■■■□□ 2.39
LINC01003-201ENST00000564834 FGAP02671 866 aa29.99■■■□□ 2.39
LINC01003-201ENST00000564834 PKP1Q13835 747 aa29.98■■■□□ 2.39
LINC01003-201ENST00000564834 TOB2Q14106 344 aaPredicted RBP29.98■■■□□ 2.39
LINC01003-201ENST00000564834 IMMTQ16891 758 aaKnown RBP29.98■■■□□ 2.39
LINC01003-201ENST00000564834 COL23A1Q86Y22 540 aaPredicted RBP29.98■■■□□ 2.39
LINC01003-201ENST00000564834 NLGN1Q8N2Q7 840 aa29.98■■■□□ 2.39
LINC01003-201ENST00000564834 AIDAQ96BJ3 306 aa29.98■■■□□ 2.39
LINC01003-201ENST00000564834 TCEANC2Q96MN5 208 aa29.98■■■□□ 2.39
LINC01003-201ENST00000564834 TPCN1Q9ULQ1 816 aa29.98■■■□□ 2.39
LINC01003-201ENST00000564834 IQSEC3Q9UPP2 1182 aaPredicted RBP29.98■■■□□ 2.39
LINC01003-201ENST00000564834 PDS5AQ29RF7 1337 aaKnown RBP29.97■■■□□ 2.39
LINC01003-201ENST00000564834 E7EWF7 191 aa29.97■■■□□ 2.39
LINC01003-201ENST00000564834 ME3Q16798 604 aa29.97■■■□□ 2.39
LINC01003-201ENST00000564834 TTLL5Q6EMB2 1281 aa29.97■■■□□ 2.39
LINC01003-201ENST00000564834 LRP2BPQ9P2M1 347 aa29.97■■■□□ 2.39
LINC01003-201ENST00000564834 ZBTB22O15209 634 aa29.96■■■□□ 2.39
LINC01003-201ENST00000564834 A0A0G2JLW4 131 aa29.95■■■□□ 2.39
LINC01003-201ENST00000564834 KLRK1P26718 216 aa29.95■■■□□ 2.39
LINC01003-201ENST00000564834 DHX32Q7L7V1 743 aaKnown RBP29.95■■■□□ 2.39
LINC01003-201ENST00000564834 RBM17Q96I25 401 aaKnown RBP29.95■■■□□ 2.39
LINC01003-201ENST00000564834 ANKRD31Q8N7Z5 1873 aa29.95■■■□□ 2.39
LINC01003-201ENST00000564834 KLRG2A4D1S0 409 aaPredicted RBP29.95■■■□□ 2.38
LINC01003-201ENST00000564834 HIBADHP31937 336 aaKnown RBP29.95■■■□□ 2.38
LINC01003-201ENST00000564834 STRBPQ96SI9 672 aaKnown RBP29.95■■■□□ 2.38
LINC01003-201ENST00000564834 LEMD3Q9Y2U8 911 aa29.95■■■□□ 2.38
LINC01003-201ENST00000564834 IRS2Q9Y4H2 1338 aa29.94■■■□□ 2.38
LINC01003-201ENST00000564834 ZDHHC9Q9Y397 364 aa29.94■■■□□ 2.38
LINC01003-201ENST00000564834 CACNA1SQ13698 1873 aa29.94■■■□□ 2.38
LINC01003-201ENST00000564834 XDHP47989 1333 aa29.94■■■□□ 2.38
LINC01003-201ENST00000564834 HOXA10P31260 410 aaPredicted RBP29.93■■■□□ 2.38
LINC01003-201ENST00000564834 CCDC83Q8IWF9 413 aa29.93■■■□□ 2.38
LINC01003-201ENST00000564834 ANKIB1Q9P2G1 1089 aa29.93■■■□□ 2.38
LINC01003-201ENST00000564834 ZMYM6O95789 1325 aa29.93■■■□□ 2.38
LINC01003-201ENST00000564834 Q6ZUG5 572 aa29.92■■■□□ 2.38
LINC01003-201ENST00000564834 ABCF2Q9UG63 623 aa29.92■■■□□ 2.38
LINC01003-201ENST00000564834 MBD4O95243 580 aa29.91■■■□□ 2.38
LINC01003-201ENST00000564834 BRD1O95696 1058 aa29.91■■■□□ 2.38
LINC01003-201ENST00000564834 EXOSC10Q01780 885 aaKnown RBP29.91■■■□□ 2.38
LINC01003-201ENST00000564834 ST3GAL1Q11201 340 aa29.91■■■□□ 2.38
LINC01003-201ENST00000564834 SMC3Q9UQE7 1217 aa29.91■■■□□ 2.38
LINC01003-201ENST00000564834 PNPLA7Q6ZV29 1317 aa29.91■■■□□ 2.38
LINC01003-201ENST00000564834 ZNF213O14771 459 aa29.9■■■□□ 2.38
LINC01003-201ENST00000564834 BAG4O95429 457 aaKnown RBP29.9■■■□□ 2.38
LINC01003-201ENST00000564834 ALX1Q15699 326 aa29.9■■■□□ 2.38
LINC01003-201ENST00000564834 CHD4Q14839 1912 aa29.9■■■□□ 2.38
LINC01003-201ENST00000564834 GNAT2P19087 354 aa29.9■■■□□ 2.38
LINC01003-201ENST00000564834 PTMSP20962 102 aa29.9■■■□□ 2.38
LINC01003-201ENST00000564834 HAND2P61296 217 aa29.9■■■□□ 2.38
LINC01003-201ENST00000564834 CRAMP1Q96RY5 1269 aa29.9■■■□□ 2.38
LINC01003-201ENST00000564834 AGXT2Q9BYV1 514 aa29.9■■■□□ 2.38
LINC01003-201ENST00000564834 CCDC88AQ3V6T2 1871 aa29.89■■■□□ 2.38
LINC01003-201ENST00000564834 PATL2C9JE40 543 aaKnown RBP29.89■■■□□ 2.38
LINC01003-201ENST00000564834 BBOX1O75936 387 aa29.89■■■□□ 2.38
LINC01003-201ENST00000564834 APPP05067 770 aa29.89■■■□□ 2.38
LINC01003-201ENST00000564834 RAI14Q9P0K7 980 aa29.89■■■□□ 2.38
LINC01003-201ENST00000564834 LRRC37AA6NMS7 1700 aa29.89■■■□□ 2.37
LINC01003-201ENST00000564834 MAST2Q6P0Q8 1798 aa29.87■■■□□ 2.37
LINC01003-201ENST00000564834 GOLGA6L22H0YM25 854 aa29.87■■■□□ 2.37
LINC01003-201ENST00000564834 C15orf52Q6ZUT6 534 aaKnown RBP29.87■■■□□ 2.37
LINC01003-201ENST00000564834 TXNRD3Q86VQ6 643 aa29.87■■■□□ 2.37
LINC01003-201ENST00000564834 NECAB1Q8N987 351 aa29.87■■■□□ 2.37
LINC01003-201ENST00000564834 BRIP1Q9BX63 1249 aa29.87■■■□□ 2.37
LINC01003-201ENST00000564834 ARMT1Q9H993 441 aa29.87■■■□□ 2.37
LINC01003-201ENST00000564834 CYP7A1P22680 504 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms