RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 SHANK2Q9UPX8 1470 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 MYBBP1AQ9BQG0 1328 aaKnown RBP6.2□□□□□ -1.42
CAPN3-212ENST00000564503 WASHC2CQ9Y4E1 1318 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 INSRP06213 1382 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 CDC42BPBQ9Y5S2 1711 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 ARHGEF5Q12774 1597 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 MMP20O60882 483 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 PTCD1O75127 700 aaKnown RBP6.19□□□□□ -1.42
CAPN3-212ENST00000564503 RALBP1Q15311 655 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 MSL1Q68DK7 614 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 SHISA2Q6UWI4 295 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 FMR1NBQ8N0W7 255 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-212ENST00000564503 TMC1Q8TDI8 760 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 LENG1Q96BZ8 264 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-212ENST00000564503 CCDC9Q9Y3X0 531 aaKnown RBP6.19□□□□□ -1.42
CAPN3-212ENST00000564503 NUP153P49790 1475 aaKnown RBP6.19□□□□□ -1.42
CAPN3-212ENST00000564503 IQGAP1P46940 1657 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 CLASP1Q7Z460 1538 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 KIAA0586Q9BVV6 1533 aa6.19□□□□□ -1.42
CAPN3-212ENST00000564503 TDRD9Q8NDG6 1382 aaKnown RBP6.18□□□□□ -1.42
CAPN3-212ENST00000564503 UNC13BO14795 1591 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 PDS5BQ9NTI5 1447 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 LOC102724428A0A0B4J2F2 783 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 J3QW42 95 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 NEFMP07197 916 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 PSAPP07602 524 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 ITGB7P26010 798 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 SIK1P57059 783 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 ADGRE1Q14246 886 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 RSPO4Q2I0M5 234 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-212ENST00000564503 NKAPLQ5M9Q1 402 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 BACH2Q9BYV9 841 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 SMG9Q9H0W8 520 aaKnown RBP6.18□□□□□ -1.42
CAPN3-212ENST00000564503 CEP152O94986 1710 aa6.18□□□□□ -1.42
CAPN3-212ENST00000564503 BLMP54132 1417 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-212ENST00000564503 PRDM15P57071 1507 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-212ENST00000564503 DISP1Q96F81 1524 aa6.17□□□□□ -1.42
CAPN3-212ENST00000564503 EIF2AK2P19525 551 aaKnown RBP6.17□□□□□ -1.42
CAPN3-212ENST00000564503 MBTPS1Q14703 1052 aa6.17□□□□□ -1.42
CAPN3-212ENST00000564503 TRIP4Q15650 581 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-212ENST00000564503 NLRP13Q86W25 1043 aa6.17□□□□□ -1.42
CAPN3-212ENST00000564503 WFDC8Q8IUA0 241 aa6.17□□□□□ -1.42
CAPN3-212ENST00000564503 EXOC6Q8TAG9 804 aa6.17□□□□□ -1.42
CAPN3-212ENST00000564503 PIK3R5Q8WYR1 880 aa6.17□□□□□ -1.42
CAPN3-212ENST00000564503 RCAN3Q9UKA8 241 aa6.17□□□□□ -1.42
CAPN3-212ENST00000564503 PREX2Q70Z35 1606 aa6.17□□□□□ -1.42
CAPN3-212ENST00000564503 TROQ12816 1431 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-212ENST00000564503 SPHKAPQ2M3C7 1700 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 UBAP1LF5GYI3 381 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 ZBTB39O15060 712 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 ATP2B4P23634 1241 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 ZAP70P43403 619 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 NRG1Q02297 640 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-212ENST00000564503 FBXO11Q86XK2 927 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 DTWD1Q8N5C7 304 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 PLD4Q96BZ4 506 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 NSUN5Q96P11 429 aaKnown RBP6.16□□□□□ -1.42
CAPN3-212ENST00000564503 POLR3GLQ9BT43 218 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 FAM13BQ9NYF5 915 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 STIM2Q9P246 746 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 IQGAP3Q86VI3 1631 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 ANKRD30AQ9BXX3 1397 aa6.16□□□□□ -1.42
CAPN3-212ENST00000564503 GPATCH8Q9UKJ3 1502 aaKnown RBP6.15□□□□□ -1.42
CAPN3-212ENST00000564503 ZNF608Q9ULD9 1512 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-212ENST00000564503 MAST1Q9Y2H9 1570 aa6.15□□□□□ -1.42
CAPN3-212ENST00000564503 KDM5AP29375 1690 aaKnown RBP6.15□□□□□ -1.42
CAPN3-212ENST00000564503 MYOM1P52179 1685 aa6.15□□□□□ -1.42
CAPN3-212ENST00000564503 HOXD8P13378 290 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-212ENST00000564503 SOX18P35713 384 aa6.15□□□□□ -1.42
CAPN3-212ENST00000564503 TXNRD3Q86VQ6 643 aa6.15□□□□□ -1.42
CAPN3-212ENST00000564503 SEPT3Q9UH03 358 aa6.15□□□□□ -1.42
CAPN3-212ENST00000564503 USP21Q9UK80 565 aa6.15□□□□□ -1.42
CAPN3-212ENST00000564503 LAS1LQ9Y4W2 734 aaKnown RBP6.15□□□□□ -1.42
CAPN3-212ENST00000564503 PARD3Q8TEW0 1356 aa6.15□□□□□ -1.43
CAPN3-212ENST00000564503 COL17A1Q9UMD9 1497 aaPredicted RBP6.15□□□□□ -1.43
CAPN3-212ENST00000564503 KIAA1210Q9ULL0 1709 aa6.14□□□□□ -1.43
CAPN3-212ENST00000564503 DEAF1O75398 565 aaPredicted RBP6.14□□□□□ -1.43
CAPN3-212ENST00000564503 GHRHP01286 108 aa6.14□□□□□ -1.43
CAPN3-212ENST00000564503 GPR152Q8TDT2 470 aa6.14□□□□□ -1.43
CAPN3-212ENST00000564503 SYNMO15061 1565 aa6.14□□□□□ -1.43
CAPN3-212ENST00000564503 DYRK3O43781 588 aa6.13□□□□□ -1.43
CAPN3-212ENST00000564503 HMGB1P09429 215 aaKnown RBP6.13□□□□□ -1.43
CAPN3-212ENST00000564503 XP32Q5T750 250 aa6.13□□□□□ -1.43
CAPN3-212ENST00000564503 GDF6Q6KF10 455 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-212ENST00000564503 OR13H1Q8NG92 308 aa6.13□□□□□ -1.43
CAPN3-212ENST00000564503 RBSNQ9H1K0 784 aa6.13□□□□□ -1.43
CAPN3-212ENST00000564503 FNDC3AQ9Y2H6 1198 aaKnown RBP6.13□□□□□ -1.43
CAPN3-212ENST00000564503 PTPRGP23470 1445 aa6.13□□□□□ -1.43
CAPN3-212ENST00000564503 ANKRD50Q9ULJ7 1429 aa6.13□□□□□ -1.43
CAPN3-212ENST00000564503 PLXNC1O60486 1568 aa6.13□□□□□ -1.43
CAPN3-212ENST00000564503 ABCA8O94911 1581 aa6.13□□□□□ -1.43
CAPN3-212ENST00000564503 ZBTB7CA1YPR0 619 aa6.12□□□□□ -1.43
CAPN3-212ENST00000564503 CNGB1Q14028 1251 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-212ENST00000564503 ZNF326Q5BKZ1 582 aaKnown RBP6.12□□□□□ -1.43
CAPN3-212ENST00000564503 COL13A1Q5TAT6 717 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-212ENST00000564503 TTC39BQ5VTQ0 682 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-212ENST00000564503 IGF2-ASQ6U949 168 aa6.12□□□□□ -1.43
CAPN3-212ENST00000564503 Q8N3U1 123 aa6.12□□□□□ -1.43
CAPN3-212ENST00000564503 CCDC82Q8N4S0 544 aa6.12□□□□□ -1.43
CAPN3-212ENST00000564503 IL22RA1Q8N6P7 574 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms