RNA–Protein interactions for RNA: ENST00000564022.1

SCAPER-210, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-210ENST00000564022 DUSP9Q99956 384 aaKnown RBP7.6□□□□□ -1.19
SCAPER-210ENST00000564022 ABCB6Q9NP58 842 aa7.6□□□□□ -1.19
SCAPER-210ENST00000564022 RNF19AQ9NV58 838 aa7.6□□□□□ -1.19
SCAPER-210ENST00000564022 PRPF40AO75400 957 aaKnown RBP7.59□□□□□ -1.19
SCAPER-210ENST00000564022 ARL4DP49703 201 aa7.59□□□□□ -1.19
SCAPER-210ENST00000564022 TAGLNQ01995 201 aaKnown RBP7.59□□□□□ -1.19
SCAPER-210ENST00000564022 HGSNATQ68CP4 663 aa7.59□□□□□ -1.19
SCAPER-210ENST00000564022 DTHD1Q6ZMT9 781 aa7.59□□□□□ -1.19
SCAPER-210ENST00000564022 MAP4K3Q8IVH8 894 aa7.59□□□□□ -1.19
SCAPER-210ENST00000564022 GLIS3Q8NEA6 775 aa7.59□□□□□ -1.19
SCAPER-210ENST00000564022 KLHDC7BQ96G42 594 aa7.59□□□□□ -1.19
SCAPER-210ENST00000564022 SEC31BQ9NQW1 1179 aa7.59□□□□□ -1.19
SCAPER-210ENST00000564022 USP21Q9UK80 565 aa7.59□□□□□ -1.19
SCAPER-210ENST00000564022 SPG7Q9UQ90 795 aa7.59□□□□□ -1.19
SCAPER-210ENST00000564022 SOX1O00570 391 aaPredicted RBP7.58□□□□□ -1.2
SCAPER-210ENST00000564022 FGD1P98174 961 aa7.58□□□□□ -1.2
SCAPER-210ENST00000564022 XPCQ01831 940 aaPredicted RBP7.58□□□□□ -1.2
SCAPER-210ENST00000564022 PCDH1Q08174 1060 aa7.58□□□□□ -1.2
SCAPER-210ENST00000564022 PRPF40BQ6NWY9 871 aaKnown RBP7.58□□□□□ -1.2
SCAPER-210ENST00000564022 NACC1Q96RE7 527 aa7.58□□□□□ -1.2
SCAPER-210ENST00000564022 BCL2L13Q9BXK5 485 aa7.58□□□□□ -1.2
SCAPER-210ENST00000564022 OSBPL7Q9BZF2 842 aa7.58□□□□□ -1.2
SCAPER-210ENST00000564022 CLEC4MQ9H2X3 399 aaPredicted RBP7.58□□□□□ -1.2
SCAPER-210ENST00000564022 SRA1Q9HD15 236 aaKnown RBP7.58□□□□□ -1.2
SCAPER-210ENST00000564022 AKAP2Q9Y2D5 859 aa7.58□□□□□ -1.2
SCAPER-210ENST00000564022 DLL1O00548 723 aa7.57□□□□□ -1.2
SCAPER-210ENST00000564022 DDX3YO15523 660 aaKnown RBP7.57□□□□□ -1.2
SCAPER-210ENST00000564022 ESRRAP11474 423 aaPredicted RBP7.57□□□□□ -1.2
SCAPER-210ENST00000564022 SELPP16109 830 aa7.57□□□□□ -1.2
SCAPER-210ENST00000564022 CD68P34810 354 aaPredicted RBP7.57□□□□□ -1.2
SCAPER-210ENST00000564022 ZNF157P51786 506 aaPredicted RBP7.57□□□□□ -1.2
SCAPER-210ENST00000564022 NLRP12P59046 1061 aa7.57□□□□□ -1.2
SCAPER-210ENST00000564022 PIP4K2BP78356 416 aa7.57□□□□□ -1.2
SCAPER-210ENST00000564022 C19orf57Q0VDD7 668 aa7.57□□□□□ -1.2
SCAPER-210ENST00000564022 FBXO33Q7Z6M2 555 aa7.57□□□□□ -1.2
SCAPER-210ENST00000564022 KLHL23Q8NBE8 558 aa7.57□□□□□ -1.2
SCAPER-210ENST00000564022 ZNF576Q9H609 170 aa7.57□□□□□ -1.2
SCAPER-210ENST00000564022 PARP2Q9UGN5 583 aa7.57□□□□□ -1.2
SCAPER-210ENST00000564022 C1QTNF9BB2RNN3 333 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 ITPKAP23677 461 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 GNA15P30679 374 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 CHRNA4P43681 627 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 GSTM4Q03013 218 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 ZNF423Q2M1K9 1284 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 CD163Q86VB7 1156 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 GIPC2Q8TF65 315 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 FAM161BQ96MY7 647 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 OSGEPQ9NPF4 335 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 KCNK4Q9NYG8 393 aa7.56□□□□□ -1.2
SCAPER-210ENST00000564022 C9orf172C9J069 976 aa7.55□□□□□ -1.2
SCAPER-210ENST00000564022 PSMD2Q13200 908 aa7.55□□□□□ -1.2
SCAPER-210ENST00000564022 SUZ12Q15022 739 aaKnown RBP7.55□□□□□ -1.2
SCAPER-210ENST00000564022 PLA2G4EQ3MJ16 856 aa7.55□□□□□ -1.2
SCAPER-210ENST00000564022 FOXD4L6Q3SYB3 417 aaPredicted RBP7.55□□□□□ -1.2
SCAPER-210ENST00000564022 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
SCAPER-210ENST00000564022 FOXD4L3Q6VB84 417 aaPredicted RBP7.55□□□□□ -1.2
SCAPER-210ENST00000564022 DCAF11Q8TEB1 546 aa7.55□□□□□ -1.2
SCAPER-210ENST00000564022 WNT8BQ93098 351 aa7.55□□□□□ -1.2
SCAPER-210ENST00000564022 C12orf49Q9H741 205 aa7.55□□□□□ -1.2
SCAPER-210ENST00000564022 GPN3Q9UHW5 284 aaPredicted RBP7.55□□□□□ -1.2
SCAPER-210ENST00000564022 GIPC1O14908 333 aa7.54□□□□□ -1.2
SCAPER-210ENST00000564022 EIF4BP23588 611 aaKnown RBP7.54□□□□□ -1.2
SCAPER-210ENST00000564022 GSTT1P30711 240 aa7.54□□□□□ -1.2
SCAPER-210ENST00000564022 DUOXA2Q1HG44 320 aa7.54□□□□□ -1.2
SCAPER-210ENST00000564022 LENG1Q96BZ8 264 aaPredicted RBP7.54□□□□□ -1.2
SCAPER-210ENST00000564022 FRMD6Q96NE9 622 aa7.54□□□□□ -1.2
SCAPER-210ENST00000564022 USP26Q9BXU7 913 aa7.54□□□□□ -1.2
SCAPER-210ENST00000564022 ADAM11O75078 769 aa7.53□□□□□ -1.2
SCAPER-210ENST00000564022 USP17L7P0C7H9 530 aa7.53□□□□□ -1.2
SCAPER-210ENST00000564022 XRCC5P13010 732 aaKnown RBP7.53□□□□□ -1.2
SCAPER-210ENST00000564022 NRG1Q02297 640 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-210ENST00000564022 PTPN12Q05209 780 aaKnown RBP7.53□□□□□ -1.2
SCAPER-210ENST00000564022 ZNF326Q5BKZ1 582 aaKnown RBP7.53□□□□□ -1.2
SCAPER-210ENST00000564022 GPAT2Q6NUI2 795 aa7.53□□□□□ -1.2
SCAPER-210ENST00000564022 ACAD11Q709F0 780 aa7.53□□□□□ -1.2
SCAPER-210ENST00000564022 UBASH3BQ8TF42 649 aa7.53□□□□□ -1.2
SCAPER-210ENST00000564022 FOXD4L4Q8WXT5 416 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-210ENST00000564022 SRCIN1Q9C0H9 1055 aa7.53□□□□□ -1.2
SCAPER-210ENST00000564022 MRPL18Q9H0U6 180 aaKnown RBP7.53□□□□□ -1.2
SCAPER-210ENST00000564022 FAM8A1Q9UBU6 413 aa7.53□□□□□ -1.2
SCAPER-210ENST00000564022 ALX3O95076 343 aa7.52□□□□□ -1.21
SCAPER-210ENST00000564022 WISP1O95388 367 aa7.52□□□□□ -1.21
SCAPER-210ENST00000564022 FAAP100Q0VG06 881 aa7.52□□□□□ -1.21
SCAPER-210ENST00000564022 AGGF1Q8N302 714 aaeCLIP7.52□□□□□ -1.21
SCAPER-210ENST00000564022 DDX54Q8TDD1 881 aaKnown RBP7.52□□□□□ -1.21
SCAPER-210ENST00000564022 ZFYVE1Q9HBF4 777 aa7.52□□□□□ -1.21
SCAPER-210ENST00000564022 MRS2Q9HD23 443 aa7.52□□□□□ -1.21
SCAPER-210ENST00000564022 PODXL2Q9NZ53 605 aa7.52□□□□□ -1.21
SCAPER-210ENST00000564022 CCDC9Q9Y3X0 531 aaKnown RBP7.52□□□□□ -1.21
SCAPER-210ENST00000564022 AK5Q9Y6K8 562 aa7.52□□□□□ -1.21
SCAPER-210ENST00000564022 TM4SF5O14894 197 aa7.51□□□□□ -1.21
SCAPER-210ENST00000564022 FBXO24O75426 580 aa7.51□□□□□ -1.21
SCAPER-210ENST00000564022 B3GALT4O96024 378 aa7.51□□□□□ -1.21
SCAPER-210ENST00000564022 ITGB2P05107 769 aa7.51□□□□□ -1.21
SCAPER-210ENST00000564022 GATA4P43694 442 aa7.51□□□□□ -1.21
SCAPER-210ENST00000564022 IREB2P48200 963 aaKnown RBP7.51□□□□□ -1.21
SCAPER-210ENST00000564022 DAB2P98082 770 aa7.51□□□□□ -1.21
SCAPER-210ENST00000564022 MBTPS1Q14703 1052 aa7.51□□□□□ -1.21
SCAPER-210ENST00000564022 RPS26P11Q5JNZ5 115 aaPredicted RBP7.51□□□□□ -1.21
SCAPER-210ENST00000564022 TPTE2Q6XPS3 522 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms