RNA–Protein interactions for RNA: ENST00000564022.1

SCAPER-210, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-210ENST00000564022 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
SCAPER-210ENST00000564022 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
SCAPER-210ENST00000564022 PHF23Q9BUL5 403 aaPredicted RBP19.88■□□□□ 0.77
SCAPER-210ENST00000564022 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
SCAPER-210ENST00000564022 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
SCAPER-210ENST00000564022 FOXD1Q16676 465 aa18.18■□□□□ 0.5
SCAPER-210ENST00000564022 ADRA2BP18089 450 aa17.57■□□□□ 0.4
SCAPER-210ENST00000564022 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
SCAPER-210ENST00000564022 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
SCAPER-210ENST00000564022 MSH5O43196 834 aa16.71■□□□□ 0.27
SCAPER-210ENST00000564022 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
SCAPER-210ENST00000564022 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
SCAPER-210ENST00000564022 KCNA4P22459 653 aa15.94■□□□□ 0.14
SCAPER-210ENST00000564022 MAPK8IP2Q13387 824 aaPredicted RBP15.92■□□□□ 0.14
SCAPER-210ENST00000564022 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
SCAPER-210ENST00000564022 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
SCAPER-210ENST00000564022 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
SCAPER-210ENST00000564022 NPM3O75607 178 aaKnown RBP15.58■□□□□ 0.08
SCAPER-210ENST00000564022 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
SCAPER-210ENST00000564022 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
SCAPER-210ENST00000564022 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
SCAPER-210ENST00000564022 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
SCAPER-210ENST00000564022 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0
SCAPER-210ENST00000564022 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
SCAPER-210ENST00000564022 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
SCAPER-210ENST00000564022 SLC4A2P04920 1241 aa14.69□□□□□ -0.06
SCAPER-210ENST00000564022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.68□□□□□ -0.064e-9■■■■■ 29.1
SCAPER-210ENST00000564022 ZBTB22O15209 634 aa14.64□□□□□ -0.07
SCAPER-210ENST00000564022 FOXD4L1Q9NU39 408 aa14.63□□□□□ -0.07
SCAPER-210ENST00000564022 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
SCAPER-210ENST00000564022 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
SCAPER-210ENST00000564022 MYCNP04198 464 aaPredicted RBP14.39□□□□□ -0.11
SCAPER-210ENST00000564022 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
SCAPER-210ENST00000564022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
SCAPER-210ENST00000564022 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
SCAPER-210ENST00000564022 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
SCAPER-210ENST00000564022 C1QBPQ07021 282 aaKnown RBP14.15□□□□□ -0.14
SCAPER-210ENST00000564022 APLP2Q06481 763 aa14.07□□□□□ -0.16
SCAPER-210ENST00000564022 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
SCAPER-210ENST00000564022 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
SCAPER-210ENST00000564022 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
SCAPER-210ENST00000564022 CAPN15O75808 1086 aa13.99□□□□□ -0.17
SCAPER-210ENST00000564022 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
SCAPER-210ENST00000564022 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
SCAPER-210ENST00000564022 ZNF219Q9P2Y4 722 aaPredicted RBP13.87□□□□□ -0.19
SCAPER-210ENST00000564022 ABCB7O75027 752 aa13.73□□□□□ -0.21
SCAPER-210ENST00000564022 POLA2Q14181 598 aa13.69□□□□□ -0.22
SCAPER-210ENST00000564022 DSG3P32926 999 aa13.67□□□□□ -0.22
SCAPER-210ENST00000564022 FBLN2P98095 1184 aa13.44□□□□□ -0.26
SCAPER-210ENST00000564022 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
SCAPER-210ENST00000564022 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
SCAPER-210ENST00000564022 FKBP8Q14318 412 aa13.26□□□□□ -0.29
SCAPER-210ENST00000564022 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
SCAPER-210ENST00000564022 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
SCAPER-210ENST00000564022 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
SCAPER-210ENST00000564022 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
SCAPER-210ENST00000564022 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
SCAPER-210ENST00000564022 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
SCAPER-210ENST00000564022 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
SCAPER-210ENST00000564022 SSUH2Q9Y2M2 353 aa12.95□□□□□ -0.34
SCAPER-210ENST00000564022 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCAPER-210ENST00000564022 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
SCAPER-210ENST00000564022 PROM2Q8N271 834 aa12.85□□□□□ -0.35
SCAPER-210ENST00000564022 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
SCAPER-210ENST00000564022 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
SCAPER-210ENST00000564022 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
SCAPER-210ENST00000564022 SPDYE1Q8NFV5 336 aaPredicted RBP12.69□□□□□ -0.38
SCAPER-210ENST00000564022 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
SCAPER-210ENST00000564022 PITPNM1O00562 1244 aa12.62□□□□□ -0.39
SCAPER-210ENST00000564022 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
SCAPER-210ENST00000564022 VASPP50552 380 aaPredicted RBP12.56□□□□□ -0.4
SCAPER-210ENST00000564022 MIER1Q8N108 512 aa12.51□□□□□ -0.41
SCAPER-210ENST00000564022 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
SCAPER-210ENST00000564022 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
SCAPER-210ENST00000564022 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
SCAPER-210ENST00000564022 KLHL34Q8N239 644 aa12.4□□□□□ -0.42
SCAPER-210ENST00000564022 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
SCAPER-210ENST00000564022 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
SCAPER-210ENST00000564022 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
SCAPER-210ENST00000564022 FXR2P51116 673 aaKnown RBP eCLIP12.34□□□□□ -0.43
SCAPER-210ENST00000564022 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
SCAPER-210ENST00000564022 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
SCAPER-210ENST00000564022 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
SCAPER-210ENST00000564022 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
SCAPER-210ENST00000564022 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
SCAPER-210ENST00000564022 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
SCAPER-210ENST00000564022 NPM1P06748 294 aaKnown RBP eCLIP12.19□□□□□ -0.46
SCAPER-210ENST00000564022 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
SCAPER-210ENST00000564022 RTN4Q9NQC3 1192 aaKnown RBP12.15□□□□□ -0.46
SCAPER-210ENST00000564022 NUBP1P53384 320 aa12.11□□□□□ -0.47
SCAPER-210ENST00000564022 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
SCAPER-210ENST00000564022 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
SCAPER-210ENST00000564022 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
SCAPER-210ENST00000564022 FAM212AQ96EL1 285 aa12.05□□□□□ -0.48
SCAPER-210ENST00000564022 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
SCAPER-210ENST00000564022 GSE1Q14687 1217 aa12.01□□□□□ -0.49
SCAPER-210ENST00000564022 POTEHQ6S545 545 aa12.01□□□□□ -0.49
SCAPER-210ENST00000564022 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
SCAPER-210ENST00000564022 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
SCAPER-210ENST00000564022 PKD2Q13563 968 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms