RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 IL25Q9H293 177 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 NRBP1Q9UHY1 535 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 TAF5LO75529 589 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 CNNM3Q8NE01 707 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 OVOS2A0A0J9YW53 1432 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 OVOS2Q6IE36 1432 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 MFSD6Q6ZSS7 791 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 MRPS27Q92552 414 aaKnown RBP12.07□□□□□ -0.48
RNF40-204ENST00000563683 CLSTN2Q9H4D0 955 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 HELLSQ9NRZ9 838 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 BTG4Q9NY30 223 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
RNF40-204ENST00000563683 ZBTB43O43298 467 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 SLU7O95391 586 aaKnown RBP12.06□□□□□ -0.48
RNF40-204ENST00000563683 SSRP1Q08945 709 aaKnown RBP12.06□□□□□ -0.48
RNF40-204ENST00000563683 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
RNF40-204ENST00000563683 CACTINQ8WUQ7 758 aaKnown RBP12.06□□□□□ -0.48
RNF40-204ENST00000563683 PUS3Q9BZE2 481 aaKnown RBP12.06□□□□□ -0.48
RNF40-204ENST00000563683 COPRSQ9NQ92 184 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 AOPEPQ8N6M6 819 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 IPO4Q8TEX9 1081 aaKnown RBP12.06□□□□□ -0.48
RNF40-204ENST00000563683 ITGA6P23229 1130 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 ZAP70P43403 619 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 SLC20A2Q08357 652 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 TMC6Q7Z403 805 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 LRRC8AQ8IWT6 810 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 WASF1Q92558 559 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 ZNF215Q9UL58 517 aaPredicted RBP12.06□□□□□ -0.48
RNF40-204ENST00000563683 RBM6P78332 1123 aaKnown RBP12.06□□□□□ -0.48
RNF40-204ENST00000563683 IRX5P78411 483 aaPredicted RBP12.06□□□□□ -0.48
RNF40-204ENST00000563683 NAA30Q147X3 362 aaPredicted RBP12.06□□□□□ -0.48
RNF40-204ENST00000563683 CAVIN4Q5BKX8 364 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 MIGA1Q8NAN2 632 aa12.06□□□□□ -0.48
RNF40-204ENST00000563683 PREX1Q8TCU6 1659 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 CYP21A2P08686 494 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 PTPN12Q05209 780 aaKnown RBP12.05□□□□□ -0.48
RNF40-204ENST00000563683 TMEM131LA2VDJ0 1609 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 SPTLC2O15270 562 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 NECTIN1Q15223 517 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 RBM43Q6ZSC3 357 aaKnown RBP12.05□□□□□ -0.48
RNF40-204ENST00000563683 MRFAP1L1Q96HT8 127 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 ZKSCAN3Q9BRR0 538 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 DLC1Q96QB1 1528 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 E7EWF7 191 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 GPAA1O43292 621 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 SKILP12757 684 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 ATP6V1AP38606 617 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 SYKP43405 635 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 TEX35Q5T0J7 233 aa12.05□□□□□ -0.48
RNF40-204ENST00000563683 ERICH4A6NGS2 130 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 SARM1Q6SZW1 724 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 GTF3C6Q969F1 213 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 CCDC196A0A1B0GTZ2 297 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 B4E1Z4 1266 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 LMOD1P29536 600 aaPredicted RBP12.04□□□□□ -0.48
RNF40-204ENST00000563683 FAM53CQ9NYF3 392 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 SLC4A4Q9Y6R1 1079 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 CYP27B1O15528 508 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 NR1I2O75469 434 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 IPO7O95373 1038 aaKnown RBP12.04□□□□□ -0.48
RNF40-204ENST00000563683 MAGEB6Q8N7X4 407 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 KCNG4Q8TDN1 519 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 HAUS7Q99871 368 aa12.04□□□□□ -0.48
RNF40-204ENST00000563683 NIP7Q9Y221 180 aaKnown RBP eCLIP12.04□□□□□ -0.48
RNF40-204ENST00000563683 ADCY9O60503 1353 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 TUBB4AP04350 444 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 HSPD1P10809 573 aaKnown RBP12.03□□□□□ -0.48
RNF40-204ENST00000563683 FILIP1LQ4L180 1135 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 ZNF652Q9Y2D9 606 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 TMEM94Q12767 1356 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 CYP7A1P22680 504 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 GSDMDP57764 484 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 DHX8Q14562 1220 aaKnown RBP12.03□□□□□ -0.48
RNF40-204ENST00000563683 ELF2Q15723 593 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 FBXO38Q6PIJ6 1188 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 NYAP1Q6ZVC0 841 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 IQCA1Q86XH1 822 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 CCDC47Q96A33 483 aaKnown RBP12.03□□□□□ -0.48
RNF40-204ENST00000563683 ARGLU1Q9NWB6 273 aaPredicted RBP12.03□□□□□ -0.48
RNF40-204ENST00000563683 WTAPQ15007 396 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 MYL10Q9BUA6 226 aa12.03□□□□□ -0.48
RNF40-204ENST00000563683 TUBGCP6Q96RT7 1819 aa12.02□□□□□ -0.48
RNF40-204ENST00000563683 CBFA2T2O43439 604 aa12.02□□□□□ -0.48
RNF40-204ENST00000563683 TCIRG1Q13488 830 aa12.02□□□□□ -0.48
RNF40-204ENST00000563683 SAMD1Q6SPF0 538 aaPredicted RBP12.02□□□□□ -0.48
RNF40-204ENST00000563683 APPBP2Q92624 585 aa12.02□□□□□ -0.48
RNF40-204ENST00000563683 TXLNAP40222 546 aa12.02□□□□□ -0.49
RNF40-204ENST00000563683 CCDC102BQ68D86 513 aa12.02□□□□□ -0.49
RNF40-204ENST00000563683 PPFIBP1Q86W92 1011 aa12.02□□□□□ -0.49
RNF40-204ENST00000563683 PTPRUQ92729 1446 aa12.02□□□□□ -0.49
RNF40-204ENST00000563683 TOP1P11387 765 aaKnown RBP12.02□□□□□ -0.49
RNF40-204ENST00000563683 ATP2B2Q01814 1243 aa12.02□□□□□ -0.49
RNF40-204ENST00000563683 MTX1Q13505 466 aa12.02□□□□□ -0.49
RNF40-204ENST00000563683 CPLX3Q8WVH0 158 aa12.02□□□□□ -0.49
RNF40-204ENST00000563683 TMX1Q9H3N1 280 aa12.02□□□□□ -0.49
RNF40-204ENST00000563683 RNF41Q9H4P4 317 aaPredicted RBP12.02□□□□□ -0.49
RNF40-204ENST00000563683 SLAIN2Q9P270 581 aa12.02□□□□□ -0.49
RNF40-204ENST00000563683 ADORA1P30542 326 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms