RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 H7C1W4 665 aa10.07□□□□□ -0.8
KARS-203ENST00000562875 BCAR3O75815 825 aa10.07□□□□□ -0.8
KARS-203ENST00000562875 MPSTP25325 297 aa10.07□□□□□ -0.8
KARS-203ENST00000562875 C8orf34Q49A92 452 aa10.07□□□□□ -0.8
KARS-203ENST00000562875 NLRP8Q86W28 1048 aa10.07□□□□□ -0.8
KARS-203ENST00000562875 FTSJ3Q8IY81 847 aaKnown RBP10.07□□□□□ -0.8
KARS-203ENST00000562875 TRIM22Q8IYM9 498 aa10.07□□□□□ -0.8
KARS-203ENST00000562875 FRAT1Q92837 279 aaPredicted RBP10.07□□□□□ -0.8
KARS-203ENST00000562875 CHMP4BQ9H444 224 aaKnown RBP10.07□□□□□ -0.8
KARS-203ENST00000562875 TERF2IPQ9NYB0 399 aa10.07□□□□□ -0.8
KARS-203ENST00000562875 TGFBR3LH3BV60 316 aa10.06□□□□□ -0.8
KARS-203ENST00000562875 THBS1P07996 1170 aa10.06□□□□□ -0.8
KARS-203ENST00000562875 LBRQ14739 615 aaKnown RBP10.06□□□□□ -0.8
KARS-203ENST00000562875 DBN1Q16643 649 aa10.06□□□□□ -0.8
KARS-203ENST00000562875 FAM26DQ5JW98 314 aa10.06□□□□□ -0.8
KARS-203ENST00000562875 HDGFL2Q7Z4V5 671 aaPredicted RBP10.06□□□□□ -0.8
KARS-203ENST00000562875 TCP11L2Q8N4U5 519 aa10.06□□□□□ -0.8
KARS-203ENST00000562875 ABTB2Q8N961 1025 aa10.06□□□□□ -0.8
KARS-203ENST00000562875 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
KARS-203ENST00000562875 MAP2P11137 1827 aaKnown RBP10.05□□□□□ -0.8
KARS-203ENST00000562875 FAM13AO94988 1023 aa10.05□□□□□ -0.8
KARS-203ENST00000562875 U2AF1L5P0DN76 240 aaPredicted RBP10.05□□□□□ -0.8
KARS-203ENST00000562875 TNNT2P45379 298 aaPredicted RBP10.05□□□□□ -0.8
KARS-203ENST00000562875 MTHFSP49914 203 aa10.05□□□□□ -0.8
KARS-203ENST00000562875 U2AF1Q01081 240 aaKnown RBP eCLIP10.05□□□□□ -0.8
KARS-203ENST00000562875 ZKSCAN2Q63HK3 967 aa10.05□□□□□ -0.8
KARS-203ENST00000562875 TREML1Q86YW5 311 aa10.05□□□□□ -0.8
KARS-203ENST00000562875 ETFBKMTQ8IXQ9 262 aa10.05□□□□□ -0.8
KARS-203ENST00000562875 SLC12A5Q9H2X9 1139 aa10.05□□□□□ -0.8
KARS-203ENST00000562875 CDC42BPGQ6DT37 1551 aa10.05□□□□□ -0.8
KARS-203ENST00000562875 ZBTB39O15060 712 aa10.04□□□□□ -0.8
KARS-203ENST00000562875 NPR3P17342 541 aa10.04□□□□□ -0.8
KARS-203ENST00000562875 RARSP54136 660 aaKnown RBP10.04□□□□□ -0.8
KARS-203ENST00000562875 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
KARS-203ENST00000562875 IER5Q5VY09 327 aa10.04□□□□□ -0.8
KARS-203ENST00000562875 SND1Q7KZF4 910 aaKnown RBP eCLIP10.04□□□□□ -0.8
KARS-203ENST00000562875 ZNF837Q96EG3 531 aaPredicted RBP10.04□□□□□ -0.8
KARS-203ENST00000562875 ZCCHC2Q9C0B9 1178 aaKnown RBP10.04□□□□□ -0.8
KARS-203ENST00000562875 REREQ9P2R6 1566 aa10.04□□□□□ -0.8
KARS-203ENST00000562875 KNDC1Q76NI1 1749 aa10.04□□□□□ -0.8
KARS-203ENST00000562875 DLC1Q96QB1 1528 aa10.03□□□□□ -0.8
KARS-203ENST00000562875 CDC14CA4D256 554 aa10.03□□□□□ -0.8
KARS-203ENST00000562875 EIF5BO60841 1220 aaKnown RBP10.03□□□□□ -0.8
KARS-203ENST00000562875 MICAL2O94851 1124 aa10.03□□□□□ -0.8
KARS-203ENST00000562875 EIF1AXP47813 144 aaKnown RBP10.03□□□□□ -0.8
KARS-203ENST00000562875 VEGFBP49765 207 aa10.03□□□□□ -0.8
KARS-203ENST00000562875 NFKBIBQ15653 356 aa10.03□□□□□ -0.8
KARS-203ENST00000562875 FIGNL1Q6PIW4 674 aa10.03□□□□□ -0.8
KARS-203ENST00000562875 BTLAQ7Z6A9 289 aa10.03□□□□□ -0.8
KARS-203ENST00000562875 GMCL1Q96IK5 515 aa10.03□□□□□ -0.8
KARS-203ENST00000562875 POGKQ9P215 609 aa10.03□□□□□ -0.8
KARS-203ENST00000562875 NXF1Q9UBU9 619 aaKnown RBP10.03□□□□□ -0.8
KARS-203ENST00000562875 IL16Q14005 1332 aa10.03□□□□□ -0.8
KARS-203ENST00000562875 IPO8O15397 1037 aaKnown RBP10.02□□□□□ -0.81
KARS-203ENST00000562875 CALD1Q05682 793 aaKnown RBP10.02□□□□□ -0.81
KARS-203ENST00000562875 MVPQ14764 893 aaKnown RBP10.02□□□□□ -0.81
KARS-203ENST00000562875 ECM1Q16610 540 aa10.02□□□□□ -0.81
KARS-203ENST00000562875 SAMD5Q5TGI4 173 aa10.02□□□□□ -0.81
KARS-203ENST00000562875 TMEM132EQ6IEE7 984 aa10.02□□□□□ -0.81
KARS-203ENST00000562875 CEP63Q96MT8 703 aa10.02□□□□□ -0.81
KARS-203ENST00000562875 DMGDHQ9UI17 866 aaKnown RBP10.02□□□□□ -0.81
KARS-203ENST00000562875 ALKQ9UM73 1620 aa10.02□□□□□ -0.81
KARS-203ENST00000562875 PTPRMP28827 1452 aa10.02□□□□□ -0.81
KARS-203ENST00000562875 KIF16BQ96L93 1317 aa10.02□□□□□ -0.81
KARS-203ENST00000562875 A0A1W2PP64 1363 aa10.01□□□□□ -0.81
KARS-203ENST00000562875 AKAP12Q02952 1782 aa10.01□□□□□ -0.81
KARS-203ENST00000562875 U2SURPO15042 1029 aaKnown RBP10.01□□□□□ -0.81
KARS-203ENST00000562875 ATXN7O15265 892 aaPredicted RBP10.01□□□□□ -0.81
KARS-203ENST00000562875 ZAP70P43403 619 aa10.01□□□□□ -0.81
KARS-203ENST00000562875 IDH3AP50213 366 aa10.01□□□□□ -0.81
KARS-203ENST00000562875 TYRO3Q06418 890 aa10.01□□□□□ -0.81
KARS-203ENST00000562875 UBAP2LQ14157 1087 aaKnown RBP10.01□□□□□ -0.81
KARS-203ENST00000562875 ALKBH2Q6NS38 261 aa10.01□□□□□ -0.81
KARS-203ENST00000562875 DZIP1LQ8IYY4 767 aaKnown RBP10.01□□□□□ -0.81
KARS-203ENST00000562875 VWA5B2Q8N398 1253 aa10.01□□□□□ -0.81
KARS-203ENST00000562875 PANK1Q8TE04 598 aa10.01□□□□□ -0.81
KARS-203ENST00000562875 GTPBP3Q969Y2 492 aaKnown RBP10.01□□□□□ -0.81
KARS-203ENST00000562875 DDX19BQ9UMR2 479 aa10.01□□□□□ -0.81
KARS-203ENST00000562875 RRP7AQ9Y3A4 280 aaKnown RBP10.01□□□□□ -0.81
KARS-203ENST00000562875 ATP7BP35670 1465 aa10.01□□□□□ -0.81
KARS-203ENST00000562875 YTHDC2Q9H6S0 1430 aaKnown RBP10□□□□□ -0.81
KARS-203ENST00000562875 DLG5Q8TDM6 1919 aa10□□□□□ -0.81
KARS-203ENST00000562875 COL3A1P02461 1466 aaPredicted RBP10□□□□□ -0.81
KARS-203ENST00000562875 MON2Q7Z3U7 1717 aa10□□□□□ -0.81
KARS-203ENST00000562875 IGHDP01880 384 aa10□□□□□ -0.81
KARS-203ENST00000562875 ARHGAP4P98171 946 aa10□□□□□ -0.81
KARS-203ENST00000562875 ATCAYQ86WG3 371 aa10□□□□□ -0.81
KARS-203ENST00000562875 SMC4Q9NTJ3 1288 aa10□□□□□ -0.81
KARS-203ENST00000562875 PCDHGC4Q9Y5F7 938 aa10□□□□□ -0.81
KARS-203ENST00000562875 TSPOAP1O95153 1857 aa10□□□□□ -0.81
KARS-203ENST00000562875 SETD1AO15047 1707 aaKnown RBP9.99□□□□□ -0.81
KARS-203ENST00000562875 DCDC2BA2VCK2 349 aa9.99□□□□□ -0.81
KARS-203ENST00000562875 DIAPH1O60610 1272 aaKnown RBP9.99□□□□□ -0.81
KARS-203ENST00000562875 ARSDP51689 593 aa9.99□□□□□ -0.81
KARS-203ENST00000562875 SV2AQ7L0J3 742 aa9.99□□□□□ -0.81
KARS-203ENST00000562875 ZNF428Q96B54 188 aa9.99□□□□□ -0.81
KARS-203ENST00000562875 RIMBP3CA6NJZ7 1639 aa9.99□□□□□ -0.81
KARS-203ENST00000562875 RIMBP3BA6NNM3 1639 aa9.99□□□□□ -0.81
KARS-203ENST00000562875 RIMBP3Q9UFD9 1639 aa9.99□□□□□ -0.81
KARS-203ENST00000562875 OPLAHO14841 1288 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms