RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 PARP1P09874 1014 aaKnown RBP12.71□□□□□ -0.38
RPAP1-204ENST00000562303 RFX1P22670 979 aa12.71□□□□□ -0.38
RPAP1-204ENST00000562303 KRT83P78385 493 aa12.71□□□□□ -0.38
RPAP1-204ENST00000562303 PLIN2Q99541 437 aa12.71□□□□□ -0.38
RPAP1-204ENST00000562303 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.38
RPAP1-204ENST00000562303 ANAPC4Q9UJX5 808 aa12.71□□□□□ -0.38
RPAP1-204ENST00000562303 GAS8O95995 478 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 BRDTQ58F21 947 aaPredicted RBP12.7□□□□□ -0.38
RPAP1-204ENST00000562303 NFATC2IPQ8NCF5 419 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 TIGD1Q96MW7 591 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 CCDC171Q6TFL3 1326 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 ZWINTO95229 277 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 ATP2A2P16615 1042 aaKnown RBP12.7□□□□□ -0.38
RPAP1-204ENST00000562303 KIF5AQ12840 1032 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 CCDC42Q96M95 316 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 CFAP57Q96MR6 1250 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 SAP30BPQ9UHR5 308 aaKnown RBP12.7□□□□□ -0.38
RPAP1-204ENST00000562303 KIF14Q15058 1648 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 PDE1AP54750 535 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 CHST3Q7LGC8 479 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 PROCA1Q8NCQ7 364 aaPredicted RBP12.7□□□□□ -0.38
RPAP1-204ENST00000562303 RNF34Q969K3 372 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 LRRC59Q96AG4 307 aaKnown RBP12.7□□□□□ -0.38
RPAP1-204ENST00000562303 STK32BQ9NY57 414 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 CALCOCO1Q9P1Z2 691 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 PAXBP1Q9Y5B6 917 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 ATP8B2P98198 1209 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 UBXN1Q04323 297 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 BIRC3Q13489 604 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 CFAP58Q5T655 872 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 DTHD1Q6ZMT9 781 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 SELENOSQ9BQE4 189 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 ESYT1Q9BSJ8 1104 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 WDR97A6NE52 1622 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 SPTLC2O15270 562 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 HSPA4P34932 840 aa12.7□□□□□ -0.38
RPAP1-204ENST00000562303 DCAF17Q5H9S7 520 aaPredicted RBP12.69□□□□□ -0.38
RPAP1-204ENST00000562303 FNBP1Q96RU3 617 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 KRT5P13647 590 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 SLC8A3P57103 927 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 SMC1BQ8NDV3 1235 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 NAP1L4Q99733 375 aaKnown RBP12.69□□□□□ -0.38
RPAP1-204ENST00000562303 DNAI1Q9UI46 699 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 NUCB1Q02818 461 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 TTC14Q96N46 770 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 STX17P56962 302 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 RAPGEF1Q13905 1077 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 RASA3Q14644 834 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 ZSCAN23Q3MJ62 389 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 WDR44Q5JSH3 913 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 ARHGAP45Q92619 1136 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 CCDC114Q96M63 670 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 HAUS7Q99871 368 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
RPAP1-204ENST00000562303 KRT86O43790 486 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 SKILP12757 684 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 PPP1R7Q15435 360 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 TEX11Q8IYF3 940 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 TPD52P55327 224 aaPredicted RBP12.68□□□□□ -0.38
RPAP1-204ENST00000562303 GTPBP4Q9BZE4 634 aaKnown RBP12.68□□□□□ -0.38
RPAP1-204ENST00000562303 FRMD4BQ9Y2L6 1034 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 SYNJ1O43426 1573 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 CTAGE9A4FU28 777 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 RPL13P26373 211 aaKnown RBP12.68□□□□□ -0.38
RPAP1-204ENST00000562303 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 GPCPD1Q9NPB8 672 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 IVNS1ABPQ9Y6Y0 642 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 SMIM23A6NLE4 172 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 SYT1P21579 422 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 TFCP2Q12800 502 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 ATRIPQ8WXE1 791 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 OPA1O60313 960 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 UFL1O94874 794 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 APOBRQ0VD83 1088 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 RBM28Q9NW13 759 aaKnown RBP12.68□□□□□ -0.38
RPAP1-204ENST00000562303 DACT1Q9NYF0 836 aa12.68□□□□□ -0.38
RPAP1-204ENST00000562303 CHMP2AO43633 222 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 CFAP157Q5JU67 520 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 CCDC129Q6ZRS4 1044 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 USP48Q86UV5 1035 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 KIFC2Q96AC6 838 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 DNAJC25Q9H1X3 360 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 STX10O60499 249 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 CCDC25Q86WR0 208 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 CAPZA3Q96KX2 299 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 PPIP5K1Q6PFW1 1433 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 RXRAP19793 462 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 CCDC65Q8IXS2 484 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 LINS1Q8NG48 757 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 CCDC169A6NNP5 214 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 FCHSD1Q86WN1 690 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 GOLGA1Q92805 767 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
RPAP1-204ENST00000562303 GINS2Q9Y248 185 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 IGHDP01880 384 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 CCT6BQ92526 530 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 ARHGEF10LQ9HCE6 1279 aa12.67□□□□□ -0.38
RPAP1-204ENST00000562303 PLCH2O75038 1416 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms