RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 CELF1Q92879 486 aaKnown RBP12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 CHAMP1Q96JM3 812 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 MPHOSPH8Q99549 860 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 ZNF804BA4D1E1 1349 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 COL1A1P02452 1464 aaPredicted RBP12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 MYH7P12883 1935 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 UQCRFS1P1P0C7P4 283 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 SLC5A1P13866 664 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 PSMA5P28066 241 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 IGHMBP2P38935 993 aaKnown RBP12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 TTLL5Q6EMB2 1281 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 BSDC1Q9NW68 430 aaPredicted RBP12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 BCAMP50895 628 aa12.16□□□□□ -0.46
TUBGCP4-202ENST00000561691 CCDC173Q0VFZ6 552 aa12.16□□□□□ -0.46
TUBGCP4-202ENST00000561691 NFIXQ14938 502 aa12.16□□□□□ -0.46
TUBGCP4-202ENST00000561691 BLOC1S2Q6QNY1 142 aa12.16□□□□□ -0.46
TUBGCP4-202ENST00000561691 KRT27Q7Z3Y8 459 aa12.16□□□□□ -0.46
TUBGCP4-202ENST00000561691 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
TUBGCP4-202ENST00000561691 WWC3Q9ULE0 1092 aa12.16□□□□□ -0.46
TUBGCP4-202ENST00000561691 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
TUBGCP4-202ENST00000561691 IRS2Q9Y4H2 1338 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 ZPR1O75312 459 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 EXOSC10Q01780 885 aaKnown RBP12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 KRT32Q14532 448 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 GAS2L3Q86XJ1 694 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 SPATA5Q8NB90 893 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 BBXQ8WY36 941 aaPredicted RBP12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 GBP4Q96PP9 640 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 NEK1Q96PY6 1258 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 CDC5LQ99459 802 aaKnown RBP12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 AGXT2Q9BYV1 514 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 NYXQ9GZU5 481 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 FAM13BQ9NYF5 915 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 ZHX1Q9UKY1 873 aaPredicted RBP12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 PDE6AP16499 860 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 TRAPPC3LQ5T215 181 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 SLC51AQ86UW1 340 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 ZSCAN31Q96LW9 406 aaPredicted RBP12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 SH2B1Q9NRF2 756 aaPredicted RBP12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 LAMA4Q16363 1823 aa12.15□□□□□ -0.46
TUBGCP4-202ENST00000561691 GPAA1O43292 621 aa12.14□□□□□ -0.47
TUBGCP4-202ENST00000561691 DTNBO60941 627 aa12.14□□□□□ -0.47
TUBGCP4-202ENST00000561691 PHF14O94880 888 aa12.14□□□□□ -0.47
TUBGCP4-202ENST00000561691 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
TUBGCP4-202ENST00000561691 ANKRD18AQ8IVF6 992 aa12.14□□□□□ -0.47
TUBGCP4-202ENST00000561691 CCDC83Q8IWF9 413 aa12.14□□□□□ -0.47
TUBGCP4-202ENST00000561691 NECAB1Q8N987 351 aa12.14□□□□□ -0.47
TUBGCP4-202ENST00000561691 NBPF3Q9H094 633 aa12.14□□□□□ -0.47
TUBGCP4-202ENST00000561691 LMBRD1Q9NUN5 540 aa12.14□□□□□ -0.47
TUBGCP4-202ENST00000561691 ZNF532Q9HCE3 1301 aa12.14□□□□□ -0.47
TUBGCP4-202ENST00000561691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 E7EWF7 191 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 TRIM37O94972 964 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 FGAP02671 866 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 GYS1P13807 737 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 TTF1Q15361 905 aaPredicted RBP12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 SLC27A3Q5K4L6 730 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 SLC9C2Q5TAH2 1124 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 CARMIL3Q8ND23 1372 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 NCLP19338 710 aaKnown RBP12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 KLRK1P26718 216 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 RFC4P35249 363 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 UBE4AQ14139 1066 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 LRRFIP1Q32MZ4 808 aaKnown RBP12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
TUBGCP4-202ENST00000561691 DYNC1I1O14576 645 aa12.12□□□□□ -0.47
TUBGCP4-202ENST00000561691 RPS8P62241 208 aaKnown RBP12.12□□□□□ -0.47
TUBGCP4-202ENST00000561691 FAM84BQ96KN1 310 aaPredicted RBP12.12□□□□□ -0.47
TUBGCP4-202ENST00000561691 STRBPQ96SI9 672 aaKnown RBP12.12□□□□□ -0.47
TUBGCP4-202ENST00000561691 IDH1O75874 414 aaKnown RBP12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 SYT1P21579 422 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 GYG1P46976 350 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 ANKRD1Q15327 319 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 Q6ZUG5 572 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 FBXO33Q7Z6M2 555 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 FBXL16Q8N461 479 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 ZNF500O60304 480 aaPredicted RBP12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 PRR5LQ6MZQ0 368 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 ZSCAN25Q6NSZ9 544 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 DHX32Q7L7V1 743 aaKnown RBP12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 ZNF384Q8TF68 577 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 LRRC2Q9BYS8 371 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 EPB41L4AQ9HCS5 686 aaPredicted RBP12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 R3HCC1Q9Y3T6 440 aaKnown RBP12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 TACC3Q9Y6A5 838 aa12.11□□□□□ -0.47
TUBGCP4-202ENST00000561691 UQCRHLA0A096LP55 91 aa12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 UQCRHP07919 91 aa12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 GJB2P29033 226 aa12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 ANTXR2P58335 489 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms