RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 CHAF1AQ13111 956 aaPredicted RBP28.39■■■□□ 2.13
TMEM249-201ENST00000561638 FBXW7Q969H0 707 aa28.39■■■□□ 2.13
TMEM249-201ENST00000561638 NDUFB9Q9Y6M9 179 aa28.39■■■□□ 2.13
TMEM249-201ENST00000561638 HMG20BQ9P0W2 317 aa28.38■■■□□ 2.13
TMEM249-201ENST00000561638 JAG2Q9Y219 1238 aa28.38■■■□□ 2.13
TMEM249-201ENST00000561638 TTC22Q5TAA0 569 aa28.37■■■□□ 2.13
TMEM249-201ENST00000561638 HAUS7Q99871 368 aa28.37■■■□□ 2.13
TMEM249-201ENST00000561638 TRIM6-TRIM34B2RNG4 842 aa28.37■■■□□ 2.13
TMEM249-201ENST00000561638 MAP4K4O95819 1239 aaPredicted RBP28.37■■■□□ 2.13
TMEM249-201ENST00000561638 GOLIM4O00461 696 aa28.35■■■□□ 2.13
TMEM249-201ENST00000561638 ZAP70P43403 619 aa28.35■■■□□ 2.13
TMEM249-201ENST00000561638 ZNRF3Q9ULT6 936 aa28.35■■■□□ 2.13
TMEM249-201ENST00000561638 GTF2IP78347 998 aa28.34■■■□□ 2.13
TMEM249-201ENST00000561638 PAG1Q9NWQ8 432 aa28.34■■■□□ 2.13
TMEM249-201ENST00000561638 MYH13Q9UKX3 1938 aa28.34■■■□□ 2.13
TMEM249-201ENST00000561638 COL1A1P02452 1464 aaPredicted RBP28.34■■■□□ 2.13
TMEM249-201ENST00000561638 PRELPP51888 382 aa28.34■■■□□ 2.13
TMEM249-201ENST00000561638 COL4A5P29400 1685 aa28.33■■■□□ 2.13
TMEM249-201ENST00000561638 TTLL5Q6EMB2 1281 aa28.33■■■□□ 2.13
TMEM249-201ENST00000561638 RILPL2Q969X0 211 aa28.33■■■□□ 2.13
TMEM249-201ENST00000561638 RNF181Q9P0P0 153 aa28.33■■■□□ 2.13
TMEM249-201ENST00000561638 GSPT1P15170 499 aaKnown RBP28.32■■■□□ 2.12
TMEM249-201ENST00000561638 WDR66Q8TBY9 1149 aa28.32■■■□□ 2.12
TMEM249-201ENST00000561638 EDC3Q96F86 508 aaKnown RBP28.32■■■□□ 2.12
TMEM249-201ENST00000561638 PDS5AQ29RF7 1337 aaKnown RBP28.32■■■□□ 2.12
TMEM249-201ENST00000561638 CNTROBQ8N137 903 aa28.32■■■□□ 2.12
TMEM249-201ENST00000561638 KCNQ5Q9NR82 932 aa28.32■■■□□ 2.12
TMEM249-201ENST00000561638 ABCF2Q9UG63 623 aa28.32■■■□□ 2.12
TMEM249-201ENST00000561638 YDJCA8MPS7 323 aa28.31■■■□□ 2.12
TMEM249-201ENST00000561638 TTF1Q15361 905 aaPredicted RBP28.31■■■□□ 2.12
TMEM249-201ENST00000561638 CCDC88AQ3V6T2 1871 aa28.31■■■□□ 2.12
TMEM249-201ENST00000561638 AKAP11Q9UKA4 1901 aa28.3■■■□□ 2.12
TMEM249-201ENST00000561638 USP17L3A6NCW0 530 aa28.3■■■□□ 2.12
TMEM249-201ENST00000561638 USP17L4A6NCW7 530 aa28.3■■■□□ 2.12
TMEM249-201ENST00000561638 RAD17O75943 681 aa28.3■■■□□ 2.12
TMEM249-201ENST00000561638 CYP2E1P05181 493 aaPredicted RBP28.3■■■□□ 2.12
TMEM249-201ENST00000561638 BMP2KLQ5H9B9 411 aa28.3■■■□□ 2.12
TMEM249-201ENST00000561638 TBC1D9Q6ZT07 1266 aa28.3■■■□□ 2.12
TMEM249-201ENST00000561638 USP17L1Q7RTZ2 530 aa28.3■■■□□ 2.12
TMEM249-201ENST00000561638 ZBTB22O15209 634 aa28.29■■■□□ 2.12
TMEM249-201ENST00000561638 MFSD14BQ5SR56 506 aa28.29■■■□□ 2.12
TMEM249-201ENST00000561638 C9orf131Q5VYM1 1079 aa28.29■■■□□ 2.12
TMEM249-201ENST00000561638 ZGPATQ8N5A5 531 aaKnown RBP28.29■■■□□ 2.12
TMEM249-201ENST00000561638 TBC1D22AQ8WUA7 517 aa28.29■■■□□ 2.12
TMEM249-201ENST00000561638 EVI5LQ96CN4 794 aa28.29■■■□□ 2.12
TMEM249-201ENST00000561638 ANTXR1Q9H6X2 564 aa28.29■■■□□ 2.12
TMEM249-201ENST00000561638 CHD4Q14839 1912 aa28.29■■■□□ 2.12
TMEM249-201ENST00000561638 FAM205AQ6ZU69 1335 aa28.29■■■□□ 2.12
TMEM249-201ENST00000561638 EIF6P56537 245 aaKnown RBP28.29■■■□□ 2.12
TMEM249-201ENST00000561638 STRIP1Q5VSL9 837 aa28.29■■■□□ 2.12
TMEM249-201ENST00000561638 LRP2BPQ9P2M1 347 aa28.29■■■□□ 2.12
TMEM249-201ENST00000561638 ANP32EQ9BTT0 268 aa28.28■■■□□ 2.12
TMEM249-201ENST00000561638 FSD1Q9BTV5 496 aa28.28■■■□□ 2.12
TMEM249-201ENST00000561638 IDH1O75874 414 aaKnown RBP28.27■■■□□ 2.12
TMEM249-201ENST00000561638 SDSP20132 328 aa28.27■■■□□ 2.12
TMEM249-201ENST00000561638 SBF1O95248 1867 aa28.27■■■□□ 2.12
TMEM249-201ENST00000561638 PIH1D3Q9NQM4 214 aaKnown RBP28.27■■■□□ 2.12
TMEM249-201ENST00000561638 SCN9AQ15858 1988 aa28.26■■■□□ 2.12
TMEM249-201ENST00000561638 FZD9O00144 591 aa28.25■■■□□ 2.11
TMEM249-201ENST00000561638 CXCL9Q07325 125 aa28.25■■■□□ 2.11
TMEM249-201ENST00000561638 SPTY2D1Q68D10 685 aaPredicted RBP28.25■■■□□ 2.11
TMEM249-201ENST00000561638 CIAPIN1Q6FI81 312 aa28.25■■■□□ 2.11
TMEM249-201ENST00000561638 RAI14Q9P0K7 980 aa28.25■■■□□ 2.11
TMEM249-201ENST00000561638 SALL1Q9NSC2 1324 aa28.25■■■□□ 2.11
TMEM249-201ENST00000561638 TNIP1Q15025 636 aa28.24■■■□□ 2.11
TMEM249-201ENST00000561638 DACT2Q5SW24 774 aa28.24■■■□□ 2.11
TMEM249-201ENST00000561638 KBTBD3Q8NAB2 608 aa28.24■■■□□ 2.11
TMEM249-201ENST00000561638 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.24■■■□□ 2.11
TMEM249-201ENST00000561638 PSMD14O00487 310 aa28.24■■■□□ 2.11
TMEM249-201ENST00000561638 LDHBP07195 334 aaKnown RBP28.24■■■□□ 2.11
TMEM249-201ENST00000561638 MAP3K12Q12852 859 aa28.24■■■□□ 2.11
TMEM249-201ENST00000561638 ERICH6Q7L0X2 663 aa28.24■■■□□ 2.11
TMEM249-201ENST00000561638 MXD3Q9BW11 206 aa28.24■■■□□ 2.11
TMEM249-201ENST00000561638 DICER1Q9UPY3 1922 aaKnown RBP28.23■■■□□ 2.11
TMEM249-201ENST00000561638 PRDX5P30044 214 aa28.22■■■□□ 2.11
TMEM249-201ENST00000561638 LRRFIP1Q32MZ4 808 aaKnown RBP28.22■■■□□ 2.11
TMEM249-201ENST00000561638 DZIP1Q86YF9 867 aaKnown RBP28.22■■■□□ 2.11
TMEM249-201ENST00000561638 GJA3Q9Y6H8 435 aa28.22■■■□□ 2.11
TMEM249-201ENST00000561638 F8W031 263 aaPredicted RBP28.21■■■□□ 2.11
TMEM249-201ENST00000561638 RSBN1LQ6PCB5 846 aaPredicted RBP28.21■■■□□ 2.11
TMEM249-201ENST00000561638 CERS5Q8N5B7 392 aa28.21■■■□□ 2.11
TMEM249-201ENST00000561638 MYO3BQ8WXR4 1341 aa28.21■■■□□ 2.11
TMEM249-201ENST00000561638 TIAM2Q8IVF5 1701 aa28.2■■■□□ 2.11
TMEM249-201ENST00000561638 ZNF541Q9H0D2 1346 aa28.2■■■□□ 2.11
TMEM249-201ENST00000561638 AK9Q5TCS8 1911 aa28.2■■■□□ 2.1
TMEM249-201ENST00000561638 VIL1P09327 827 aaKnown RBP28.19■■■□□ 2.1
TMEM249-201ENST00000561638 FKBP1AP62942 108 aaKnown RBP28.19■■■□□ 2.1
TMEM249-201ENST00000561638 SLC9C2Q5TAH2 1124 aa28.19■■■□□ 2.1
TMEM249-201ENST00000561638 ZSCAN25Q6NSZ9 544 aa28.19■■■□□ 2.1
TMEM249-201ENST00000561638 SUGT1Q9Y2Z0 365 aa28.19■■■□□ 2.1
TMEM249-201ENST00000561638 KIAA0825Q8IV33 1275 aa28.19■■■□□ 2.1
TMEM249-201ENST00000561638 ZBTB12Q9Y330 459 aaPredicted RBP28.19■■■□□ 2.1
TMEM249-201ENST00000561638 MAGEB6Q8N7X4 407 aa28.18■■■□□ 2.1
TMEM249-201ENST00000561638 TTF2Q9UNY4 1162 aaKnown RBP28.18■■■□□ 2.1
TMEM249-201ENST00000561638 PSME4Q14997 1843 aa28.18■■■□□ 2.1
TMEM249-201ENST00000561638 GRIK5Q16478 980 aa28.17■■■□□ 2.1
TMEM249-201ENST00000561638 DIAPH3Q9NSV4 1193 aa28.17■■■□□ 2.1
TMEM249-201ENST00000561638 MECOMQ03112 1051 aa28.16■■■□□ 2.1
TMEM249-201ENST00000561638 MAST3O60307 1309 aa28.16■■■□□ 2.1
TMEM249-201ENST00000561638 ZFYP08048 801 aaPredicted RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms