RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 ITGAEP38570 1179 aa6.42□□□□□ -1.38
LRRC28-222ENST00000561431 GRIK5Q16478 980 aa6.42□□□□□ -1.38
LRRC28-222ENST00000561431 XKR5Q6UX68 686 aa6.42□□□□□ -1.38
LRRC28-222ENST00000561431 SLC51AQ86UW1 340 aa6.42□□□□□ -1.38
LRRC28-222ENST00000561431 DNAJC25Q9H1X3 360 aa6.42□□□□□ -1.38
LRRC28-222ENST00000561431 NLRP2Q9NX02 1062 aa6.42□□□□□ -1.38
LRRC28-222ENST00000561431 PRPF40AO75400 957 aaKnown RBP6.41□□□□□ -1.38
LRRC28-222ENST00000561431 POLR3DP05423 398 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-222ENST00000561431 TAL1P17542 331 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-222ENST00000561431 GRNP28799 593 aaKnown RBP6.41□□□□□ -1.38
LRRC28-222ENST00000561431 TAGLNQ01995 201 aaKnown RBP6.41□□□□□ -1.38
LRRC28-222ENST00000561431 ENOX2Q16206 610 aaKnown RBP6.41□□□□□ -1.38
LRRC28-222ENST00000561431 IGF2-ASQ6U949 168 aa6.41□□□□□ -1.38
LRRC28-222ENST00000561431 C1orf127Q8N9H9 656 aa6.41□□□□□ -1.38
LRRC28-222ENST00000561431 EFCC1Q9HA90 598 aa6.41□□□□□ -1.38
LRRC28-222ENST00000561431 ZFYVE28Q9HCC9 887 aa6.41□□□□□ -1.38
LRRC28-222ENST00000561431 WWC3Q9ULE0 1092 aa6.41□□□□□ -1.38
LRRC28-222ENST00000561431 OAS3Q9Y6K5 1087 aaKnown RBP6.41□□□□□ -1.38
LRRC28-222ENST00000561431 CFTRP13569 1480 aa6.41□□□□□ -1.38
LRRC28-222ENST00000561431 MMP20O60882 483 aa6.4□□□□□ -1.38
LRRC28-222ENST00000561431 GADD45BO75293 160 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-222ENST00000561431 PSMD2Q13200 908 aa6.4□□□□□ -1.38
LRRC28-222ENST00000561431 FBXO33Q7Z6M2 555 aa6.4□□□□□ -1.38
LRRC28-222ENST00000561431 NCAPG2Q86XI2 1143 aa6.4□□□□□ -1.38
LRRC28-222ENST00000561431 DZIP1LQ8IYY4 767 aaKnown RBP6.4□□□□□ -1.38
LRRC28-222ENST00000561431 SPACA7Q96KW9 195 aa6.4□□□□□ -1.38
LRRC28-222ENST00000561431 DUSP9Q99956 384 aaKnown RBP6.4□□□□□ -1.38
LRRC28-222ENST00000561431 CNTN3Q9P232 1028 aa6.4□□□□□ -1.38
LRRC28-222ENST00000561431 KANSL3Q9P2N6 904 aa6.4□□□□□ -1.38
LRRC28-222ENST00000561431 PDS5BQ9NTI5 1447 aa6.4□□□□□ -1.39
LRRC28-222ENST00000561431 EREGO14944 169 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 DEAF1O75398 565 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-222ENST00000561431 MED26O95402 600 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 IGHA2P01877 340 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 PLAURQ03405 335 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 USPL1Q5W0Q7 1092 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 FAM35AQ86V20 835 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 MRRFQ96E11 262 aaKnown RBP6.39□□□□□ -1.39
LRRC28-222ENST00000561431 SETDB2Q96T68 719 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 LPIN3Q9BQK8 851 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 PARP2Q9UGN5 583 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 SPG7Q9UQ90 795 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 CCDC88BA6NC98 1476 aa6.39□□□□□ -1.39
LRRC28-222ENST00000561431 KIAA1324LA8MWY0 1029 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-222ENST00000561431 CYP2E1P05181 493 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-222ENST00000561431 EDN3P14138 238 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 HYAL2Q12891 473 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 FZD5Q13467 585 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 DHX32Q7L7V1 743 aaKnown RBP6.38□□□□□ -1.39
LRRC28-222ENST00000561431 FBF1Q8TES7 1133 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 CCDC74AQ96AQ1 378 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 NSUN5Q96P11 429 aaKnown RBP6.38□□□□□ -1.39
LRRC28-222ENST00000561431 RBSNQ9H1K0 784 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 PPP4R2Q9NY27 417 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 TLR7Q9NYK1 1049 aaKnown RBP6.38□□□□□ -1.39
LRRC28-222ENST00000561431 ZFATQ9P243 1243 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 VTI1BQ9UEU0 232 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 RNF114Q9Y508 228 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 WDR62O43379 1518 aa6.38□□□□□ -1.39
LRRC28-222ENST00000561431 PRDM2Q13029 1718 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 MRC2Q9UBG0 1479 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 DLL1O00548 723 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 MAP3K6O95382 1288 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 CPB1P15086 417 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 GP2P55259 537 aaKnown RBP6.37□□□□□ -1.39
LRRC28-222ENST00000561431 MLLT1Q03111 559 aaPredicted RBP6.37□□□□□ -1.39
LRRC28-222ENST00000561431 PCSK7Q16549 785 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.37□□□□□ -1.39
LRRC28-222ENST00000561431 WFDC8Q8IUA0 241 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 OR13H1Q8NG92 308 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 FAM161BQ96MY7 647 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 AKTIPQ9H8T0 292 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 FRRS1LQ9P0K9 344 aa6.37□□□□□ -1.39
LRRC28-222ENST00000561431 FANCD2Q9BXW9 1451 aa6.36□□□□□ -1.39
LRRC28-222ENST00000561431 CEP164Q9UPV0 1460 aa6.36□□□□□ -1.39
LRRC28-222ENST00000561431 UNCXA6NJT0 531 aa6.36□□□□□ -1.39
LRRC28-222ENST00000561431 SORBS3O60504 671 aa6.36□□□□□ -1.39
LRRC28-222ENST00000561431 GHRHP01286 108 aa6.36□□□□□ -1.39
LRRC28-222ENST00000561431 PERM1Q5SV97 790 aa6.36□□□□□ -1.39
LRRC28-222ENST00000561431 HFE2Q6ZVN8 426 aa6.36□□□□□ -1.39
LRRC28-222ENST00000561431 EPS8L3Q8TE67 593 aaKnown RBP6.36□□□□□ -1.39
LRRC28-222ENST00000561431 NPHS2Q9NP85 383 aa6.36□□□□□ -1.39
LRRC28-222ENST00000561431 ZBTB42B2RXF5 422 aa6.35□□□□□ -1.39
LRRC28-222ENST00000561431 ALX3O95076 343 aa6.35□□□□□ -1.39
LRRC28-222ENST00000561431 EIF2AK2P19525 551 aaKnown RBP6.35□□□□□ -1.39
LRRC28-222ENST00000561431 GNA15P30679 374 aa6.35□□□□□ -1.39
LRRC28-222ENST00000561431 TSNAXIP1Q2TAA8 658 aa6.35□□□□□ -1.39
LRRC28-222ENST00000561431 FRMD6Q96NE9 622 aa6.35□□□□□ -1.39
LRRC28-222ENST00000561431 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
LRRC28-222ENST00000561431 EHD4Q9H223 541 aa6.35□□□□□ -1.39
LRRC28-222ENST00000561431 CHRDQ9H2X0 955 aa6.35□□□□□ -1.39
LRRC28-222ENST00000561431 FAM177BA6PVY3 158 aa6.34□□□□□ -1.39
LRRC28-222ENST00000561431 J3QW42 95 aa6.34□□□□□ -1.39
LRRC28-222ENST00000561431 ADAMTS4O75173 837 aa6.34□□□□□ -1.39
LRRC28-222ENST00000561431 TGFB1P01137 390 aa6.34□□□□□ -1.39
LRRC28-222ENST00000561431 EIF4BP23588 611 aaKnown RBP6.34□□□□□ -1.39
LRRC28-222ENST00000561431 SOX18P35713 384 aa6.34□□□□□ -1.39
LRRC28-222ENST00000561431 NRLP54845 237 aa6.34□□□□□ -1.39
LRRC28-222ENST00000561431 PI16Q6UXB8 463 aa6.34□□□□□ -1.39
LRRC28-222ENST00000561431 GALNT12Q8IXK2 581 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms