RNA–Protein interactions for RNA: ENST00000561412.1

IRF9-214, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-214ENST00000561412 ZNF853P0CG23 659 aa12.98□□□□□ -0.33
IRF9-214ENST00000561412 CWF19L2Q2TBE0 894 aaKnown RBP12.98□□□□□ -0.33
IRF9-214ENST00000561412 C8orf58Q8NAV2 365 aa12.98□□□□□ -0.33
IRF9-214ENST00000561412 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
IRF9-214ENST00000561412 EFCC1Q9HA90 598 aa12.98□□□□□ -0.33
IRF9-214ENST00000561412 MAP3K2Q9Y2U5 619 aa12.98□□□□□ -0.33
IRF9-214ENST00000561412 PTCH2Q9Y6C5 1203 aa12.98□□□□□ -0.33
IRF9-214ENST00000561412 ZBTB48P10074 688 aaPredicted RBP12.97□□□□□ -0.33
IRF9-214ENST00000561412 MIER1Q8N108 512 aa12.97□□□□□ -0.33
IRF9-214ENST00000561412 ERO1AQ96HE7 468 aa12.97□□□□□ -0.33
IRF9-214ENST00000561412 PRMT6Q96LA8 375 aaPredicted RBP12.97□□□□□ -0.33
IRF9-214ENST00000561412 ARHGAP39Q9C0H5 1083 aa12.97□□□□□ -0.33
IRF9-214ENST00000561412 ECM29Q5VYK3 1845 aa12.97□□□□□ -0.33
IRF9-214ENST00000561412 ZNF804BA4D1E1 1349 aa12.96□□□□□ -0.33
IRF9-214ENST00000561412 MYO3BQ8WXR4 1341 aa12.96□□□□□ -0.33
IRF9-214ENST00000561412 ECM2O94769 699 aaPredicted RBP12.96□□□□□ -0.33
IRF9-214ENST00000561412 SP3Q02447 781 aa12.96□□□□□ -0.33
IRF9-214ENST00000561412 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
IRF9-214ENST00000561412 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.33
IRF9-214ENST00000561412 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
IRF9-214ENST00000561412 CDC5LQ99459 802 aaKnown RBP12.96□□□□□ -0.33
IRF9-214ENST00000561412 ELP3Q9H9T3 547 aa12.96□□□□□ -0.33
IRF9-214ENST00000561412 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.33
IRF9-214ENST00000561412 TESPA1A2RU30 521 aaPredicted RBP12.95□□□□□ -0.34
IRF9-214ENST00000561412 CCER2I3L3R5 266 aa12.95□□□□□ -0.34
IRF9-214ENST00000561412 INHBEP58166 350 aa12.95□□□□□ -0.34
IRF9-214ENST00000561412 DLGAP5Q15398 846 aa12.95□□□□□ -0.34
IRF9-214ENST00000561412 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
IRF9-214ENST00000561412 HELBQ8NG08 1087 aaPredicted RBP12.95□□□□□ -0.34
IRF9-214ENST00000561412 BRI3BPQ8WY22 251 aa12.95□□□□□ -0.34
IRF9-214ENST00000561412 RUNDC1Q96C34 613 aa12.95□□□□□ -0.34
IRF9-214ENST00000561412 VEZTQ9HBM0 779 aa12.95□□□□□ -0.34
IRF9-214ENST00000561412 CD209Q9NNX6 404 aa12.95□□□□□ -0.34
IRF9-214ENST00000561412 A0A1B0GUL6 1792 aa12.94□□□□□ -0.34
IRF9-214ENST00000561412 COL1A1P02452 1464 aaPredicted RBP12.94□□□□□ -0.34
IRF9-214ENST00000561412 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
IRF9-214ENST00000561412 TAF5LO75529 589 aa12.94□□□□□ -0.34
IRF9-214ENST00000561412 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
IRF9-214ENST00000561412 G2E3Q7L622 706 aa12.94□□□□□ -0.34
IRF9-214ENST00000561412 UBE3BQ7Z3V4 1068 aa12.94□□□□□ -0.34
IRF9-214ENST00000561412 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
IRF9-214ENST00000561412 OPTNQ96CV9 577 aa12.94□□□□□ -0.34
IRF9-214ENST00000561412 LEMD3Q9Y2U8 911 aa12.94□□□□□ -0.34
IRF9-214ENST00000561412 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 NEURL1BA8MQ27 555 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 PPP1R12BO60237 982 aaPredicted RBP12.93□□□□□ -0.34
IRF9-214ENST00000561412 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 ITGA6P23229 1130 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 CASP7P55210 303 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 CHRNDQ07001 517 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 RASA3Q14644 834 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 FAM43AQ8N2R8 423 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 SHISA4Q96DD7 197 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 MRS2Q9HD23 443 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
IRF9-214ENST00000561412 UNC80Q8N2C7 3258 aa12.93□□□□□ -0.34
IRF9-214ENST00000561412 H7C1W4 665 aa12.92□□□□□ -0.34
IRF9-214ENST00000561412 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
IRF9-214ENST00000561412 CTGFP29279 349 aa12.92□□□□□ -0.34
IRF9-214ENST00000561412 SLC9C1Q4G0N8 1177 aa12.92□□□□□ -0.34
IRF9-214ENST00000561412 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.92□□□□□ -0.34
IRF9-214ENST00000561412 MTMR14Q8NCE2 650 aa12.92□□□□□ -0.34
IRF9-214ENST00000561412 TEPSINQ96N21 525 aa12.92□□□□□ -0.34
IRF9-214ENST00000561412 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
IRF9-214ENST00000561412 MTFR1Q15390 333 aa12.91□□□□□ -0.34
IRF9-214ENST00000561412 SLC4A8Q2Y0W8 1093 aa12.91□□□□□ -0.34
IRF9-214ENST00000561412 CCDC184Q52MB2 194 aa12.91□□□□□ -0.34
IRF9-214ENST00000561412 KSR2Q6VAB6 950 aa12.91□□□□□ -0.34
IRF9-214ENST00000561412 CCL15-CCL14A0A0B4J2E2 113 aa12.9□□□□□ -0.34
IRF9-214ENST00000561412 IGHMBP2P38935 993 aaKnown RBP12.9□□□□□ -0.34
IRF9-214ENST00000561412 IREB2P48200 963 aaKnown RBP12.9□□□□□ -0.34
IRF9-214ENST00000561412 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
IRF9-214ENST00000561412 GRIK5Q16478 980 aa12.9□□□□□ -0.34
IRF9-214ENST00000561412 CCL15Q16663 113 aa12.9□□□□□ -0.34
IRF9-214ENST00000561412 ANKRD13AQ8IZ07 590 aa12.9□□□□□ -0.34
IRF9-214ENST00000561412 TDRD3Q9H7E2 651 aaKnown RBP12.9□□□□□ -0.34
IRF9-214ENST00000561412 APAF1O14727 1248 aa12.89□□□□□ -0.35
IRF9-214ENST00000561412 CSF1RP07333 972 aa12.89□□□□□ -0.35
IRF9-214ENST00000561412 VGLL4Q14135 290 aa12.89□□□□□ -0.35
IRF9-214ENST00000561412 SUPT20HL1Q3ZLR7 823 aa12.89□□□□□ -0.35
IRF9-214ENST00000561412 TSR2Q969E8 191 aaKnown RBP12.89□□□□□ -0.35
IRF9-214ENST00000561412 TMEM39BQ9GZU3 492 aa12.89□□□□□ -0.35
IRF9-214ENST00000561412 IFT57Q9NWB7 429 aa12.89□□□□□ -0.35
IRF9-214ENST00000561412 ZNF70Q9UC06 446 aaPredicted RBP12.89□□□□□ -0.35
IRF9-214ENST00000561412 PPP2R3BQ9Y5P8 575 aa12.89□□□□□ -0.35
IRF9-214ENST00000561412 IL1R1P14778 569 aa12.88□□□□□ -0.35
IRF9-214ENST00000561412 KCNJ4P48050 445 aa12.88□□□□□ -0.35
IRF9-214ENST00000561412 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
IRF9-214ENST00000561412 ANKRD2Q9GZV1 360 aa12.88□□□□□ -0.35
IRF9-214ENST00000561412 PRO3102Q9H379 93 aa12.88□□□□□ -0.35
IRF9-214ENST00000561412 LAMA2P24043 3122 aaKnown RBP12.88□□□□□ -0.35
IRF9-214ENST00000561412 VCANP13611 3396 aa12.87□□□□□ -0.35
IRF9-214ENST00000561412 TCP10L2B9ZVM9 353 aa12.87□□□□□ -0.35
IRF9-214ENST00000561412 DLL1O00548 723 aa12.87□□□□□ -0.35
IRF9-214ENST00000561412 SOX1O00570 391 aaPredicted RBP12.87□□□□□ -0.35
IRF9-214ENST00000561412 DDX58O95786 925 aaKnown RBP12.87□□□□□ -0.35
IRF9-214ENST00000561412 MMP14P50281 582 aa12.87□□□□□ -0.35
IRF9-214ENST00000561412 RBM5P52756 815 aaKnown RBP eCLIP12.87□□□□□ -0.35
IRF9-214ENST00000561412 CACNB3P54284 484 aa12.87□□□□□ -0.35
IRF9-214ENST00000561412 GCKRQ14397 625 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms