RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 PDE6AP16499 860 aa19.41■□□□□ 0.7
MEIS3-209ENST00000561040 FGD1P98174 961 aa19.41■□□□□ 0.7
MEIS3-209ENST00000561040 RASGRF1Q13972 1273 aa19.41■□□□□ 0.7
MEIS3-209ENST00000561040 Q6ZUG5 572 aa19.41■□□□□ 0.7
MEIS3-209ENST00000561040 FBXL16Q8N461 479 aa19.41■□□□□ 0.7
MEIS3-209ENST00000561040 RTN4Q9NQC3 1192 aaKnown RBP19.41■□□□□ 0.7
MEIS3-209ENST00000561040 LMBRD1Q9NUN5 540 aa19.41■□□□□ 0.7
MEIS3-209ENST00000561040 DDX49Q9Y6V7 483 aaKnown RBP19.41■□□□□ 0.7
MEIS3-209ENST00000561040 SYT1P21579 422 aa19.41■□□□□ 0.7
MEIS3-209ENST00000561040 AGXT2Q9BYV1 514 aa19.41■□□□□ 0.7
MEIS3-209ENST00000561040 ANKRD2Q9GZV1 360 aa19.41■□□□□ 0.7
MEIS3-209ENST00000561040 ZNF804BA4D1E1 1349 aa19.4■□□□□ 0.7
MEIS3-209ENST00000561040 ZMYM6O95789 1325 aa19.4■□□□□ 0.7
MEIS3-209ENST00000561040 ZNF532Q9HCE3 1301 aa19.4■□□□□ 0.7
MEIS3-209ENST00000561040 EXOSC10Q01780 885 aaKnown RBP19.4■□□□□ 0.7
MEIS3-209ENST00000561040 STOX1Q6ZVD7 989 aa19.4■□□□□ 0.7
MEIS3-209ENST00000561040 KRT27Q7Z3Y8 459 aa19.4■□□□□ 0.7
MEIS3-209ENST00000561040 WDR19Q8NEZ3 1342 aa19.39■□□□□ 0.7
MEIS3-209ENST00000561040 FGAP02671 866 aa19.39■□□□□ 0.7
MEIS3-209ENST00000561040 RPS8P62241 208 aaKnown RBP19.39■□□□□ 0.7
MEIS3-209ENST00000561040 CAVIN4Q5BKX8 364 aa19.39■□□□□ 0.7
MEIS3-209ENST00000561040 TCRBV5S4A2TA0A5A2 114 aa19.39■□□□□ 0.69
MEIS3-209ENST00000561040 ZNF213O14771 459 aa19.39■□□□□ 0.69
MEIS3-209ENST00000561040 MBD3O95983 291 aa19.39■□□□□ 0.69
MEIS3-209ENST00000561040 ST3GAL1Q11201 340 aa19.39■□□□□ 0.69
MEIS3-209ENST00000561040 C3orf67Q6ZVT6 689 aa19.39■□□□□ 0.69
MEIS3-209ENST00000561040 GTF3C6Q969F1 213 aa19.39■□□□□ 0.69
MEIS3-209ENST00000561040 TCEANC2Q96MN5 208 aa19.39■□□□□ 0.69
MEIS3-209ENST00000561040 MINPP1Q9UNW1 487 aa19.39■□□□□ 0.69
MEIS3-209ENST00000561040 TAF1P21675 1872 aa19.38■□□□□ 0.69
MEIS3-209ENST00000561040 SEMA3EO15041 775 aa19.38■□□□□ 0.69
MEIS3-209ENST00000561040 NPHP1O15259 732 aa19.38■□□□□ 0.69
MEIS3-209ENST00000561040 NECAB1Q8N987 351 aa19.38■□□□□ 0.69
MEIS3-209ENST00000561040 AIDAQ96BJ3 306 aa19.38■□□□□ 0.69
MEIS3-209ENST00000561040 LLPHQ9BRT6 129 aaKnown RBP19.38■□□□□ 0.69
MEIS3-209ENST00000561040 GZF1Q9H116 711 aaPredicted RBP19.38■□□□□ 0.69
MEIS3-209ENST00000561040 COL4A1P02462 1669 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 GOLGA6L3A6NEY3 463 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 ZBTB22O15209 634 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 FOXP2O15409 715 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 F13A1P00488 732 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 GNAT2P19087 354 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 BCAMP50895 628 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 ALX1Q15699 326 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 PRPF40AO75400 957 aaKnown RBP19.37■□□□□ 0.69
MEIS3-209ENST00000561040 FOXD4L5Q5VV16 416 aaPredicted RBP19.37■□□□□ 0.69
MEIS3-209ENST00000561040 NCOA7Q8NI08 942 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 FOXD4L4Q8WXT5 416 aaPredicted RBP19.37■□□□□ 0.69
MEIS3-209ENST00000561040 BRF1Q92994 677 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 WWC3Q9ULE0 1092 aa19.37■□□□□ 0.69
MEIS3-209ENST00000561040 PDS5AQ29RF7 1337 aaKnown RBP19.36■□□□□ 0.69
MEIS3-209ENST00000561040 MYH13Q9UKX3 1938 aa19.36■□□□□ 0.69
MEIS3-209ENST00000561040 PFKFB2O60825 505 aa19.36■□□□□ 0.69
MEIS3-209ENST00000561040 CSPP1Q1MSJ5 1256 aa19.36■□□□□ 0.69
MEIS3-209ENST00000561040 CELF1Q92879 486 aaKnown RBP19.36■□□□□ 0.69
MEIS3-209ENST00000561040 DENND2AQ9ULE3 1009 aa19.36■□□□□ 0.69
MEIS3-209ENST00000561040 KIF3AQ9Y496 699 aa19.36■□□□□ 0.69
MEIS3-209ENST00000561040 FSD2A1L4K1 749 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 PHF14O94880 888 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 NCLP19338 710 aaKnown RBP19.35■□□□□ 0.69
MEIS3-209ENST00000561040 MCM5P33992 734 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 COL9A3Q14050 684 aaPredicted RBP19.35■□□□□ 0.69
MEIS3-209ENST00000561040 LARP1BQ659C4 914 aaKnown RBP19.35■□□□□ 0.69
MEIS3-209ENST00000561040 TTLL5Q6EMB2 1281 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 TMED8Q6PL24 325 aaPredicted RBP19.35■□□□□ 0.69
MEIS3-209ENST00000561040 SMIM5Q71RC9 77 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 RALYLQ86SE5 291 aaKnown RBP19.35■□□□□ 0.69
MEIS3-209ENST00000561040 VPS37DQ86XT2 251 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 MAGEB6Q8N7X4 407 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 TMEM87AQ8NBN3 555 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 ZNF274Q96GC6 653 aaPredicted RBP19.35■□□□□ 0.69
MEIS3-209ENST00000561040 STRBPQ96SI9 672 aaKnown RBP19.35■□□□□ 0.69
MEIS3-209ENST00000561040 LRRC4BQ9NT99 713 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 PNPLA7Q6ZV29 1317 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 TRDNQ13061 729 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 ZNF772Q68DY9 489 aaPredicted RBP19.35■□□□□ 0.69
MEIS3-209ENST00000561040 CNBD1Q8NA66 436 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 MTMR6Q9Y217 621 aa19.35■□□□□ 0.69
MEIS3-209ENST00000561040 TNRC6CQ9HCJ0 1690 aaKnown RBP19.34■□□□□ 0.69
MEIS3-209ENST00000561040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.34■□□□□ 0.69
MEIS3-209ENST00000561040 PATL2C9JE40 543 aaKnown RBP19.34■□□□□ 0.69
MEIS3-209ENST00000561040 SNAP23O00161 211 aa19.34■□□□□ 0.69
MEIS3-209ENST00000561040 IGSF3O75054 1194 aa19.34■□□□□ 0.69
MEIS3-209ENST00000561040 EVCP57679 992 aa19.34■□□□□ 0.69
MEIS3-209ENST00000561040 NFIXQ14938 502 aa19.34■□□□□ 0.69
MEIS3-209ENST00000561040 AMIGO3Q86WK7 504 aa19.34■□□□□ 0.69
MEIS3-209ENST00000561040 LRP2BPQ9P2M1 347 aa19.34■□□□□ 0.69
MEIS3-209ENST00000561040 APPP05067 770 aa19.33■□□□□ 0.69
MEIS3-209ENST00000561040 HMGN5P82970 282 aaKnown RBP19.33■□□□□ 0.69
MEIS3-209ENST00000561040 BRPF3Q9ULD4 1205 aa19.33■□□□□ 0.69
MEIS3-209ENST00000561040 CHD4Q14839 1912 aa19.33■□□□□ 0.68
MEIS3-209ENST00000561040 STK3Q13188 491 aa19.32■□□□□ 0.68
MEIS3-209ENST00000561040 NACAP1Q9BZK3 213 aa19.32■□□□□ 0.68
MEIS3-209ENST00000561040 RBM6P78332 1123 aaKnown RBP19.32■□□□□ 0.68
MEIS3-209ENST00000561040 MB21D2Q8IYB1 491 aaPredicted RBP19.32■□□□□ 0.68
MEIS3-209ENST00000561040 TCHHQ07283 1943 aa19.31■□□□□ 0.68
MEIS3-209ENST00000561040 VPS37CA5D8V6 355 aaPredicted RBP19.31■□□□□ 0.68
MEIS3-209ENST00000561040 MBD4O95243 580 aa19.31■□□□□ 0.68
MEIS3-209ENST00000561040 TM4SF1P30408 202 aa19.31■□□□□ 0.68
MEIS3-209ENST00000561040 GYG1P46976 350 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms